Miyakogusa Predicted Gene

Lj5g3v0626690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0626690.1 tr|D8TW33|D8TW33_VOLCA Qc-SNARE, SYP7-family
OS=Volvox carteri GN=syp71 PE=4
SV=1,46.88,0.000000000003,T_SNARE,Target SNARE coiled-coil domain;
seg,NULL; SYNTAXIN,Syntaxin/epimorphin, conserved site; no
,CUFF.53563.1
         (265 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g066460.1 | syntaxin of plants protein | HC | chr1:2851277...   452   e-127
Medtr1g066460.2 | syntaxin of plants protein | HC | chr1:2851277...   443   e-125
Medtr7g100980.1 | syntaxin of plants protein | HC | chr7:4072795...   423   e-119
Medtr2g093800.1 | syntaxin of plants protein | HC | chr2:4000871...   331   5e-91

>Medtr1g066460.1 | syntaxin of plants protein | HC |
           chr1:28512776-28508155 | 20130731
          Length = 265

 Score =  452 bits (1162), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 219/265 (82%), Positives = 238/265 (89%)

Query: 1   MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKE 60
           MSVIDLLTRVD+IC KYDKYD+++   +N+SGDDAF RLYA+VD+DIEAL QKAE AS E
Sbjct: 1   MSVIDLLTRVDSICKKYDKYDLDKQNNANVSGDDAFVRLYASVDSDIEALLQKAEKASNE 60

Query: 61  KGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
           +GKASAVAINAEIRRTKARLLEEVPKLQ+LA+KKVKGL SQEFAARNDLVLALPERIQAI
Sbjct: 61  RGKASAVAINAEIRRTKARLLEEVPKLQRLALKKVKGLESQEFAARNDLVLALPERIQAI 120

Query: 121 PDGTPAAPKQTGGWASSGSRPDIKFDSDGRFDDEYFQQTEESSRFRNEYEMRRIKQDQGL 180
           PDGTP APKQTGGWASS SRP+IKFDSDGRFDDEYFQ TE+S++F+ EYEMRRIKQDQGL
Sbjct: 121 PDGTPVAPKQTGGWASSASRPEIKFDSDGRFDDEYFQSTEQSNQFKQEYEMRRIKQDQGL 180

Query: 181 DVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDQAASDLKNTNVRLKDTVIQLRSSR 240
           D+IAEGLDTLKDMAHDMNEELDRQVPLMDEID KVD+A+SDLKNTNVRLKDTV QLRSSR
Sbjct: 181 DMIAEGLDTLKDMAHDMNEELDRQVPLMDEIDAKVDKASSDLKNTNVRLKDTVNQLRSSR 240

Query: 241 NFCXXXXXXXXXXXXAAYLYNVLKK 265
           NFC            AAYLYNVLKK
Sbjct: 241 NFCIDIVLLIIILGIAAYLYNVLKK 265


>Medtr1g066460.2 | syntaxin of plants protein | HC |
           chr1:28512776-28509818 | 20130731
          Length = 261

 Score =  443 bits (1140), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 214/260 (82%), Positives = 233/260 (89%)

Query: 1   MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKE 60
           MSVIDLLTRVD+IC KYDKYD+++   +N+SGDDAF RLYA+VD+DIEAL QKAE AS E
Sbjct: 1   MSVIDLLTRVDSICKKYDKYDLDKQNNANVSGDDAFVRLYASVDSDIEALLQKAEKASNE 60

Query: 61  KGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
           +GKASAVAINAEIRRTKARLLEEVPKLQ+LA+KKVKGL SQEFAARNDLVLALPERIQAI
Sbjct: 61  RGKASAVAINAEIRRTKARLLEEVPKLQRLALKKVKGLESQEFAARNDLVLALPERIQAI 120

Query: 121 PDGTPAAPKQTGGWASSGSRPDIKFDSDGRFDDEYFQQTEESSRFRNEYEMRRIKQDQGL 180
           PDGTP APKQTGGWASS SRP+IKFDSDGRFDDEYFQ TE+S++F+ EYEMRRIKQDQGL
Sbjct: 121 PDGTPVAPKQTGGWASSASRPEIKFDSDGRFDDEYFQSTEQSNQFKQEYEMRRIKQDQGL 180

Query: 181 DVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDQAASDLKNTNVRLKDTVIQLRSSR 240
           D+IAEGLDTLKDMAHDMNEELDRQVPLMDEID KVD+A+SDLKNTNVRLKDTV QLRSSR
Sbjct: 181 DMIAEGLDTLKDMAHDMNEELDRQVPLMDEIDAKVDKASSDLKNTNVRLKDTVNQLRSSR 240

Query: 241 NFCXXXXXXXXXXXXAAYLY 260
           NFC            AAYLY
Sbjct: 241 NFCIDIVLLIIILGIAAYLY 260


>Medtr7g100980.1 | syntaxin of plants protein | HC |
           chr7:40727955-40730728 | 20130731
          Length = 261

 Score =  423 bits (1088), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/260 (77%), Positives = 228/260 (87%)

Query: 1   MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKE 60
           MSVI++LTRVDTIC KYD+YDV +H ++N+S DDAFA+LYA  DA+IEA  QKAETASKE
Sbjct: 1   MSVIEILTRVDTICKKYDRYDVVKHNDANVSADDAFAKLYAIFDANIEAALQKAETASKE 60

Query: 61  KGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
           K +AS VAINAEIRRTKARLLEE+PKLQ+LAVKKVKGLS QEF+ RNDLVL+LPERIQAI
Sbjct: 61  KNRASTVAINAEIRRTKARLLEEIPKLQRLAVKKVKGLSLQEFSTRNDLVLSLPERIQAI 120

Query: 121 PDGTPAAPKQTGGWASSGSRPDIKFDSDGRFDDEYFQQTEESSRFRNEYEMRRIKQDQGL 180
           PDGTPAAPKQTGGW +S +RP+IKFDSDGR DD YF+ T+ESS+FR EYEMR++KQD+GL
Sbjct: 121 PDGTPAAPKQTGGWGASATRPEIKFDSDGRLDDGYFEPTKESSQFRQEYEMRKMKQDEGL 180

Query: 181 DVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDQAASDLKNTNVRLKDTVIQLRSSR 240
           DVIAEGLDTLK+MAHDMNEE DRQVPLMDEIDTKVD+A+SDLKNTNVRLKDTV QLRSSR
Sbjct: 181 DVIAEGLDTLKNMAHDMNEEFDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVTQLRSSR 240

Query: 241 NFCXXXXXXXXXXXXAAYLY 260
           NFC            AAYLY
Sbjct: 241 NFCIDIVLLIIILGIAAYLY 260


>Medtr2g093800.1 | syntaxin of plants protein | HC |
           chr2:40008710-40011407 | 20130731
          Length = 262

 Score =  331 bits (848), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 164/265 (61%), Positives = 200/265 (75%), Gaps = 4/265 (1%)

Query: 1   MSVIDLLTRVDTICNKYDKYDVERHRESNLSGDDAFARLYATVDADIEALNQKAETASKE 60
           MSVID+L RVD IC KYDKYD+++ RE N  GDD FARLYA VD+ I+    K+E ASKE
Sbjct: 1   MSVIDILFRVDDICKKYDKYDIDKQRELNAYGDDGFARLYAAVDSTIQQALNKSEAASKE 60

Query: 61  KGKASAVAINAEIRRTKARLLEEVPKLQKLAVKKVKGLSSQEFAARNDLVLALPERIQAI 120
             +A A A NAE+RR K RL++EVPKL KL  KKVKGLSS++ A RNDLVLALPERI +I
Sbjct: 61  TNRAVAAAWNAEVRRAKGRLMDEVPKLTKLVNKKVKGLSSEDIAIRNDLVLALPERILSI 120

Query: 121 PDGTPAAPKQTGGWASSGSRPDIKFDS-DGRFDDEYFQQTEESSRFRNEYEMRRIKQDQG 179
           PDG  +A   TGG   + S P IKFDS +G  D +YF Q+EES++FRNEYEMR+IKQD+G
Sbjct: 121 PDGITSAASHTGG---TSSHPHIKFDSPEGPLDSDYFNQSEESNQFRNEYEMRKIKQDEG 177

Query: 180 LDVIAEGLDTLKDMAHDMNEELDRQVPLMDEIDTKVDQAASDLKNTNVRLKDTVIQLRSS 239
           LD+I+EGLDTLK++A DMNEE++RQVPLMDE+D K D+A SDL+NTN+RLK T+ +LRSS
Sbjct: 178 LDIISEGLDTLKNLALDMNEEIERQVPLMDEMDAKADKAMSDLRNTNLRLKKTITELRSS 237

Query: 240 RNFCXXXXXXXXXXXXAAYLYNVLK 264
           RNFC              YLYN L+
Sbjct: 238 RNFCIDIILLCVLLGIVMYLYNALR 262