Miyakogusa Predicted Gene
- Lj5g3v0616260.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0616260.1 Non Characterized Hit- tr|H3JN27|H3JN27_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,26.86,2e-16,Atx10homo_assoc,Ataxin-10 domain; no
description,Armadillo-like helical; ARM repeat,Armadillo-type
f,CUFF.53541.1
(480 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g075940.1 | ARM repeat protein | HC | chr7:28543135-285395... 597 e-170
>Medtr7g075940.1 | ARM repeat protein | HC | chr7:28543135-28539537
| 20130731
Length = 491
Score = 597 bits (1538), Expect = e-170, Method: Compositional matrix adjust.
Identities = 300/481 (62%), Positives = 361/481 (75%), Gaps = 8/481 (1%)
Query: 2 AVDALSLEHPLSEDTXXXXXXXXXXXXXXXXXXXXXXISRSDYGRSDLASRKVLPAVLSI 61
DA HP+S+ + S+S RS A +K+LP +L++
Sbjct: 4 GTDAPFSNHPISQQSLNSLFDLSNSTTLQTSLETLIESSKSTSNRSLYACKKILPTILTV 63
Query: 62 VQSLTQTRHHVLSLCFKLFRNLCAGEAANQNLFLELGGV-AVVSGILRSQA-GSPCPDHG 119
+ S H+LSLCFKL RNLCAGE NQN+FLE GV VVS ILRS+ GS D+
Sbjct: 64 LHSPPSL--HILSLCFKLLRNLCAGEILNQNMFLENDGVFIVVSSILRSEVVGS---DYM 118
Query: 120 LVRWGLQVLANVSLAGKQHQRAIWEELYPVGFGSLARLGTKQTCDPLCMLIYTCCDGNPE 179
LVRWGLQVLANV LAGK+HQ+A+W+E++PVGF S+AR+G K+ DPLCM+IYTCCDGN +
Sbjct: 119 LVRWGLQVLANVCLAGKEHQKAVWDEMFPVGFLSVARIGKKEVNDPLCMVIYTCCDGNDQ 178
Query: 180 WFRELSNANGWHIMAQILRTASSASFDEDWIKLLISRICLEECLLPVLFSELRFVDAPKD 239
WF E+ + GW+++ +I+RTASSASF EDWIKLL+SRICLE+ L VLFS+LRF+D P
Sbjct: 179 WFSEVCSDGGWNVLVEIVRTASSASFGEDWIKLLLSRICLEDSQLRVLFSKLRFMDIPDG 238
Query: 240 EDTESNEKEFSSEQAFLLRILPEILNERIRDVTVSEDVALFVFGIFKKSLGVLEHATRSK 299
EDT++ + +FSSEQAFLL+I+ +ILNERI DVT+S +VA FV+GIFKKS+GVLEHA R K
Sbjct: 239 EDTKTKDDQFSSEQAFLLQIISDILNERIGDVTISLEVASFVYGIFKKSIGVLEHAVRGK 298
Query: 300 FGLPSGSAAVDVLGYTLTILRDICAEDSVRGNNGKEDIVDVXXXXXXXXXXXXXXXXXXP 359
GLPSG VDVLGY+LT+LRDICA DSVRGN+ ++VD+ P
Sbjct: 299 SGLPSGITDVDVLGYSLTMLRDICAHDSVRGNSEDTEVVDMLLSYGLIELVFILLGDLEP 358
Query: 360 PAIIRKGIKQFENQDGASCSSKPCPYKGFRRDIVALIGNCLYRRKHVQDEIRQRNGILLL 419
P IIRKG+K EN DGAS SSKPCPYKGFRRDIVALIGNC+YRRKHVQDEIR RNGILLL
Sbjct: 359 PTIIRKGMKHSENPDGASSSSKPCPYKGFRRDIVALIGNCVYRRKHVQDEIRSRNGILLL 418
Query: 420 LQQCVTDEDNPFLREWGIWSVRNMLEGNEENQKLVAELEFQGSADALPEIAALGLRVEVD 479
LQQCVTDEDNP+LREWGIW VRNMLEGNEENQK ++EL+ QGSAD +PEI+ALGLRVEVD
Sbjct: 419 LQQCVTDEDNPYLREWGIWCVRNMLEGNEENQKEISELQLQGSAD-VPEISALGLRVEVD 477
Query: 480 Q 480
Q
Sbjct: 478 Q 478