Miyakogusa Predicted Gene

Lj5g3v0615620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0615620.1 Non Characterized Hit- tr|K3XKR5|K3XKR5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si002488,30.08,0.011,seg,NULL,CUFF.53463.1
         (198 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g453160.1 | hypothetical protein | HC | chr3:20319744-2032...   168   3e-42
Medtr3g075160.1 | Myb/SANT-like DNA-binding domain protein | LC ...   166   1e-41
Medtr0697s0010.1 | Myb/SANT-like DNA-binding domain protein | HC...   124   7e-29
Medtr1g052620.1 | hypothetical protein | HC | chr1:21533041-2153...    96   2e-20

>Medtr3g453160.1 | hypothetical protein | HC |
           chr3:20319744-20320724 | 20130731
          Length = 210

 Score =  168 bits (425), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 93/189 (49%), Positives = 124/189 (65%), Gaps = 17/189 (8%)

Query: 25  RLKIAFRKDKARA--------HA--------ESSDEGDFGLNLN-DDETIESPYPKTPTY 67
           RL   F KDKA          HA         SS   +F ++LN  +E  ES   +T TY
Sbjct: 19  RLHTVFGKDKACGDTSEDPADHAYNIVKEFFPSSPRNEFDIDLNLGEENFESQISETATY 78

Query: 68  NTAKVARLMDQSHSDASLSGGGKKRVKYDGDDDEVSESLITSLNKLGEVYAQAAESIQQL 127
           NT +V   ++QS  D + +  GK+  K     D+VS+SL++SLNKLGE YA + E+I+QL
Sbjct: 79  NTTQVPSQVNQSQRDVTSNRSGKRAAKRAKHTDDVSDSLLSSLNKLGEFYAGSVENIKQL 138

Query: 128 TSCFIHQKQTADRRNQVASVLEEIEGLSTTEMIRAAILITSNDNLCDCFFTMDTLEMKKQ 187
           TSCF+H+K TADRRNQV S+L+EIEGLS  +++RA ++IT ++NLCD FFTMDT E+KK+
Sbjct: 139 TSCFMHEKLTADRRNQVVSLLKEIEGLSAVDVVRAGMVITKDNNLCDYFFTMDTPELKKE 198

Query: 188 FVDIVLNNN 196
           FV IVL NN
Sbjct: 199 FVHIVLKNN 207


>Medtr3g075160.1 | Myb/SANT-like DNA-binding domain protein | LC |
           chr3:34150148-34151226 | 20130731
          Length = 326

 Score =  166 bits (420), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/189 (49%), Positives = 123/189 (65%), Gaps = 17/189 (8%)

Query: 25  RLKIAFRKDKARA--------HA--------ESSDEGDFGLNLN-DDETIESPYPKTPTY 67
           RL   F KDKA          HA         SS   +F ++LN  +E  ES   +T TY
Sbjct: 135 RLHNVFGKDKACGDTSEDPADHAYNIVKEFFPSSPRNEFDIDLNLGEENFESQISETATY 194

Query: 68  NTAKVARLMDQSHSDASLSGGGKKRVKYDGDDDEVSESLITSLNKLGEVYAQAAESIQQL 127
           NT +V   ++QS  D + +  GK   K     D+VS+SL++SLNKLGE YA + E+I+QL
Sbjct: 195 NTTQVPSQVNQSQRDVTSNRSGKSAAKRAKHTDDVSDSLLSSLNKLGEFYAGSVENIKQL 254

Query: 128 TSCFIHQKQTADRRNQVASVLEEIEGLSTTEMIRAAILITSNDNLCDCFFTMDTLEMKKQ 187
           TSCF+H+K TADRRNQV S+L+EIEGLS  +++RA ++IT ++NLCD FFTMDT E+KK+
Sbjct: 255 TSCFMHEKLTADRRNQVVSLLKEIEGLSAVDVVRAGMVITKDNNLCDYFFTMDTPELKKE 314

Query: 188 FVDIVLNNN 196
           FV IVL NN
Sbjct: 315 FVHIVLKNN 323


>Medtr0697s0010.1 | Myb/SANT-like DNA-binding domain protein | HC |
           scaffold0697:4796-3391 | 20130731
          Length = 323

 Score =  124 bits (310), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 99/157 (63%), Gaps = 16/157 (10%)

Query: 36  RAHAESSDEGDFGLNLNDD--ETIESPYPKTPTYNTAKVARLMDQSHSDASLSGGGKKRV 93
           + + +S+ EG  G++LNDD  E  ES  P+TPT NT           +  S        V
Sbjct: 162 KENVQSTQEGGSGISLNDDDAENFESQMPETPTANTT----------APGSNPSNPATTV 211

Query: 94  KYDGDDDEVSESLITSLNKLGEVYAQAAESIQQL-TSCFIHQKQTADRRNQVASVLEEIE 152
           KY+   D+ S+S+  SLNKLGE+YA   E+++Q+ TSCF+H+K TADRRNQ+ S+L+EIE
Sbjct: 212 KYN---DDASDSMSNSLNKLGEIYANGIENMKQVFTSCFVHEKHTADRRNQIVSILKEIE 268

Query: 153 GLSTTEMIRAAILITSNDNLCDCFFTMDTLEMKKQFV 189
           GLS  E++ A +LIT ++NLCD FF      +++ F+
Sbjct: 269 GLSDAEVVMAGMLITKDNNLCDYFFHNGYSWIEEAFI 305


>Medtr1g052620.1 | hypothetical protein | HC |
           chr1:21533041-21531046 | 20130731
          Length = 199

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 43/70 (61%), Positives = 57/70 (81%), Gaps = 1/70 (1%)

Query: 109 SLNKLGEVYAQAAESIQQ-LTSCFIHQKQTADRRNQVASVLEEIEGLSTTEMIRAAILIT 167
           SLNKLGE+YA   E+++Q  TSCF+H+K TADRRNQ+ S+L+EIEGLS  E++ A +LIT
Sbjct: 4   SLNKLGEIYANGIENMKQVFTSCFVHEKHTADRRNQIVSILKEIEGLSDAEVVMAGMLIT 63

Query: 168 SNDNLCDCFF 177
            ++NLCD FF
Sbjct: 64  KDNNLCDYFF 73