Miyakogusa Predicted Gene

Lj5g3v0615420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0615420.1 tr|I0YSF8|I0YSF8_9CHLO Alternative oxidase
OS=Coccomyxa subellipsoidea C-169 PE=3
SV=1,30.83,0.00001,seg,NULL,CUFF.53439.1
         (267 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g067320.1 | transmembrane protein, putative | HC | chr1:29...   289   2e-78
Medtr7g100150.1 | transmembrane protein, putative | HC | chr7:40...   249   1e-66
Medtr7g100150.2 | transmembrane protein, putative | HC | chr7:40...   192   2e-49

>Medtr1g067320.1 | transmembrane protein, putative | HC |
           chr1:29006937-29010395 | 20130731
          Length = 214

 Score =  289 bits (739), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 140/218 (64%), Positives = 162/218 (74%), Gaps = 4/218 (1%)

Query: 49  MSLPNSRVSVAIFLSFIFFTSFPGLMLCAVVSLNSIEVFRTHEWLKATSTVYFLCTEENK 108
           MS  N+R+S+A+F   +FF +FPGLMLCAVVSL+SIE+F  HEWLK TSTVYFLC  ENK
Sbjct: 1   MSASNTRISLALF---VFFANFPGLMLCAVVSLSSIEIFERHEWLKVTSTVYFLCEGENK 57

Query: 109 TVLPDVKRPHVFYSFNGNESWQPLSSFSSKKCKRCGLYEEDSITSDDVFEEWEFCPSDFT 168
            V  DVKR    Y++NG +SW+ LS+FSSK CKRCGLYEE+SITSDD F+EWEFCPSDFT
Sbjct: 58  NVFEDVKRARFVYAYNGQQSWKILSNFSSKNCKRCGLYEENSITSDDAFDEWEFCPSDFT 117

Query: 169 GPDGEYNRFKEKEFNATFLCQECLSLAGVSSSSDGKGMHXXXXXXXXXXXXXXXXXGVMG 228
            P GEY RFKEK+FNATFLC +CLS  G SSSSD +G H                 GV G
Sbjct: 118 APHGEYVRFKEKQFNATFLCPDCLSF-GASSSSDKRGKHIAILVFLGALAAGVLILGVFG 176

Query: 229 AYKFWLKKIREQDQTRLLKLFEDGDYMEDELGLGSAIM 266
           AYKFWLKK +E+DQ   LKLFEDGD +EDELGLG  I+
Sbjct: 177 AYKFWLKKRKEEDQAHFLKLFEDGDDIEDELGLGGVIV 214


>Medtr7g100150.1 | transmembrane protein, putative | HC |
           chr7:40370933-40373498 | 20130731
          Length = 226

 Score =  249 bits (637), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 126/226 (55%), Positives = 162/226 (71%), Gaps = 6/226 (2%)

Query: 46  IPMMSLPNSRVS-VAIFLSFIFFTSFPGLMLCAVVSLNSIEVFRTHEWLKATSTVYFLCT 104
           + +  L NSRVS + +F    FFT FPGL+L AVV+L+SIE+F THEWL+ T +VYF C+
Sbjct: 1   MSVQHLQNSRVSRLFLFSFIFFFTYFPGLVLSAVVTLSSIEIFTTHEWLRPTPSVYFRCS 60

Query: 105 EENKTVLPDVKRPHVFYSFNGNESWQPLSSFSSKKCKRCGLYEEDSITSDDVFEEWEFCP 164
            +NKT+LPDVK+ HV Y+F G ESWQPL+ F+++KCKRCG YE+DS+ SDD F+EWE CP
Sbjct: 61  GDNKTILPDVKKKHVLYAFKGEESWQPLTEFTARKCKRCGFYEKDSVLSDDEFDEWELCP 120

Query: 165 SDFTGPDGEYNRFKEKEFNATFLCQECLSLAGVS-SSSD----GKGMHXXXXXXXXXXXX 219
           SDFT PDG+Y  FKEKE NA+F+C ECLS +  + S+SD    GKGM+            
Sbjct: 121 SDFTAPDGKYVHFKEKELNASFICPECLSFSNDTISASDGNHKGKGMNVGVIVLLTVLVS 180

Query: 220 XXXXXGVMGAYKFWLKKIREQDQTRLLKLFEDGDYMEDELGLGSAI 265
                G +G YK+W K+ REQDQ R LKLF++GD +EDELGLG+ I
Sbjct: 181 TVLIAGAVGTYKYWQKRKREQDQARFLKLFDEGDDIEDELGLGTII 226


>Medtr7g100150.2 | transmembrane protein, putative | HC |
           chr7:40370984-40373346 | 20130731
          Length = 189

 Score =  192 bits (489), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 93/150 (62%), Positives = 118/150 (78%), Gaps = 1/150 (0%)

Query: 48  MMSLPNSRVS-VAIFLSFIFFTSFPGLMLCAVVSLNSIEVFRTHEWLKATSTVYFLCTEE 106
           +  L NSRVS + +F    FFT FPGL+L AVV+L+SIE+F THEWL+ T +VYF C+ +
Sbjct: 3   VQHLQNSRVSRLFLFSFIFFFTYFPGLVLSAVVTLSSIEIFTTHEWLRPTPSVYFRCSGD 62

Query: 107 NKTVLPDVKRPHVFYSFNGNESWQPLSSFSSKKCKRCGLYEEDSITSDDVFEEWEFCPSD 166
           NKT+LPDVK+ HV Y+F G ESWQPL+ F+++KCKRCG YE+DS+ SDD F+EWE CPSD
Sbjct: 63  NKTILPDVKKKHVLYAFKGEESWQPLTEFTARKCKRCGFYEKDSVLSDDEFDEWELCPSD 122

Query: 167 FTGPDGEYNRFKEKEFNATFLCQECLSLAG 196
           FT PDG+Y  FKEKE NA+F+C ECLS + 
Sbjct: 123 FTAPDGKYVHFKEKELNASFICPECLSFSN 152