Miyakogusa Predicted Gene

Lj5g3v0614680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0614680.1 Non Characterized Hit- tr|I1LYV2|I1LYV2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42178 PE,85.42,5e-16,
,NODE_64031_length_151_cov_53.000000.path2.1
         (49 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g068580.1 | hypothetical protein | HC | chr1:29382847-2938...    89   8e-19
Medtr2g005070.1 | hypothetical protein | HC | chr2:27802-22687 |...    89   1e-18
Medtr2g048470.1 | hypothetical protein | HC | chr2:21353039-2134...    69   1e-12

>Medtr1g068580.1 | hypothetical protein | HC |
           chr1:29382847-29381031 | 20130731
          Length = 107

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 39/48 (81%), Positives = 44/48 (91%)

Query: 1   MELFMIKTGFYDKVTVLESEKRAWENSPEAQAMRDALNPWRHIDAEGT 48
           ME FM+KTGFYDKVTVLESEKRA ENSPEAQA+R+ALNPWRH+D + T
Sbjct: 57  MEFFMVKTGFYDKVTVLESEKRALENSPEAQAIREALNPWRHVDTKET 104


>Medtr2g005070.1 | hypothetical protein | HC | chr2:27802-22687 |
          20130731
          Length = 102

 Score = 88.6 bits (218), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/48 (81%), Positives = 44/48 (91%)

Query: 1  MELFMIKTGFYDKVTVLESEKRAWENSPEAQAMRDALNPWRHIDAEGT 48
          ME FM+KTGFYDKVTVLESEKRA ENSPEAQA+R+ALNPWRH+D + T
Sbjct: 52 MEFFMVKTGFYDKVTVLESEKRALENSPEAQAIREALNPWRHVDTKET 99


>Medtr2g048470.1 | hypothetical protein | HC |
           chr2:21353039-21345957 | 20130731
          Length = 121

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/39 (76%), Positives = 35/39 (89%)

Query: 10  FYDKVTVLESEKRAWENSPEAQAMRDALNPWRHIDAEGT 48
            YDKVTVLESEKRA ENSP+AQA+R+ALNPWRH+D + T
Sbjct: 80  LYDKVTVLESEKRALENSPDAQAIREALNPWRHVDTKET 118