Miyakogusa Predicted Gene

Lj5g3v0614530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0614530.1 tr|B1XK02|B1XK02_SYNP2 Arginine biosynthesis
bifunctional protein ArgJ OS=Synechococcus sp. (strain
,42.21,3e-19,Q9ZUR7_ARATH_Q9ZUR7;,Arginine biosynthesis protein ArgJ;
seg,NULL; DmpA/ArgJ-like,Peptidase S58 DmpA,gene.g59322.t1.1
         (175 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g068845.1 | arginine biosynthesis protein ArgJ | HC | chr1...   142   1e-34

>Medtr1g068845.1 | arginine biosynthesis protein ArgJ | HC |
           chr1:29434869-29427365 | 20130731
          Length = 470

 Score =  142 bits (358), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/162 (53%), Positives = 87/162 (53%), Gaps = 55/162 (33%)

Query: 25  LVGGTKVRVGGMAKGSGMIHPNMATMLGV-----------------------------DG 55
           LVG TKVR+GGMAKGSGMIHPNMATMLGV                             DG
Sbjct: 227 LVGRTKVRIGGMAKGSGMIHPNMATMLGVITTDAGVTSDVWRKMVQVAVNRSFNQITVDG 286

Query: 56  DTSTNDTVXXXXXXXXXXXXXXXXXXXEAIQLQACLDAVMQGLAKSIAWDGEGATCLIE- 114
           DTSTNDTV                   EAIQLQACLDAVMQGLAKSIAWDGEGATCLIE 
Sbjct: 287 DTSTNDTVIALASGLSGLSCISSLDSDEAIQLQACLDAVMQGLAKSIAWDGEGATCLIEV 346

Query: 115 -------------------------AAVYGRDPNWGRIAAAA 131
                                    AAVYGRDPNWGRIAAAA
Sbjct: 347 SVTGANSEAEAAKVARSVASSSLVKAAVYGRDPNWGRIAAAA 388