Miyakogusa Predicted Gene

Lj5g3v0614400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0614400.1 Non Characterized Hit- tr|E9BC28|E9BC28_LEIDB
Tyrosyl-tRNA synthetase, putative OS=Leishmania
donova,26.71,2e-16,seg,NULL; Nucleotidylyl transferase,NULL;
tRNA-synt_1b,Aminoacyl-tRNA synthetase, class Ic;
OS03G033,CUFF.53361.1
         (380 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g053270.1 | tyrosine-tRNA ligase-like protein | HC | chr1:...   688   0.0  
Medtr1g007340.1 | tyrosine-tRNA ligase-like protein | LC | chr1:...   614   e-176
Medtr1g007325.1 | tyrosine-tRNA ligase-like protein | HC | chr1:...   376   e-104

>Medtr1g053270.1 | tyrosine-tRNA ligase-like protein | HC |
           chr1:22344522-22337040 | 20130731
          Length = 384

 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/363 (90%), Positives = 345/363 (95%), Gaps = 3/363 (0%)

Query: 21  AQSSNPNDQ---LTLEQKFQIVRSIGEECIQEDELLKLLANKPEPVCYDGFEPSGRMHIA 77
           + +SNPN     L+ EQ+F+IVRSIGEECIQEDELL LLA KP+PVCYDGFEPSGRMHIA
Sbjct: 22  STNSNPNPTPQLLSAEQRFEIVRSIGEECIQEDELLNLLAKKPQPVCYDGFEPSGRMHIA 81

Query: 78  QGVMKAINVNKLTSSGCRVKIWIADWFAKLNNKMGGDLKKIEIVGRYLIEIWKAVGMDLE 137
           QGVMK INVNKLTS+GC VKIWIADWFAKLNNKMGGDLKKIEIVGRYLIEIWKAVGMDLE
Sbjct: 82  QGVMKTINVNKLTSAGCLVKIWIADWFAKLNNKMGGDLKKIEIVGRYLIEIWKAVGMDLE 141

Query: 138 GGKVEFLWSSKEINARADEYWPLVLDIAQKNNLKRIIRCSQIMGRSEQDELTAAQIFYPC 197
           GGKVEFLWSSKEINARADEYWPLVLDIAQKNNLKRIIRCSQIMGRSEQDELTAAQIFYPC
Sbjct: 142 GGKVEFLWSSKEINARADEYWPLVLDIAQKNNLKRIIRCSQIMGRSEQDELTAAQIFYPC 201

Query: 198 MQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSK 257
           MQCADIFFLKADICQLGMDQRKVNVLAREYCD IKRKNKP+ILSHHMLPGLQQGQEKMSK
Sbjct: 202 MQCADIFFLKADICQLGMDQRKVNVLAREYCDVIKRKNKPVILSHHMLPGLQQGQEKMSK 261

Query: 258 SDQSSAVFMEDEEAEVNVKIKKAYCPPKIVDGNPCLEYIKYLILPWFNEFTVERNEDNGG 317
           SD  S+++MEDEEAEVNVKIKKAYCPPKIV+GNPCLEYI+YLILPWFNEFTVERN DNGG
Sbjct: 262 SDPLSSIYMEDEEAEVNVKIKKAYCPPKIVEGNPCLEYIRYLILPWFNEFTVERNADNGG 321

Query: 318 NKTFQSFEELAADFESGELHPADLKPALSKSLNKILEPVRVHFRTDSNAKELLKRVKAYR 377
           NKTF+SFEEL AD+ESGELHPADLKPALSKSLNKILEPVR HF+ DSNAKELLKRVKAYR
Sbjct: 322 NKTFKSFEELIADYESGELHPADLKPALSKSLNKILEPVRQHFKNDSNAKELLKRVKAYR 381

Query: 378 VTK 380
           VTK
Sbjct: 382 VTK 384


>Medtr1g007340.1 | tyrosine-tRNA ligase-like protein | LC |
           chr1:290174-284592 | 20130731
          Length = 485

 Score =  614 bits (1584), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 286/360 (79%), Positives = 325/360 (90%), Gaps = 2/360 (0%)

Query: 21  AQSSNPNDQLTLEQKFQIVRSIGEECIQEDELLKLLANKPEPVCYDGFEPSGRMHIAQGV 80
           A+++NP   L++E++F+IV SIGEECIQ+DEL  LLANK + VCYDGFEPSGRMHIAQG+
Sbjct: 15  AETTNP--LLSVEERFEIVGSIGEECIQDDELFNLLANKKDIVCYDGFEPSGRMHIAQGI 72

Query: 81  MKAINVNKLTSSGCRVKIWIADWFAKLNNKMGGDLKKIEIVGRYLIEIWKAVGMDLEGGK 140
           +KAINVNKLTS+GCRVKIW+ADWFAKLNNKMGGDL KI+ VG+Y IEIWKA GMD EGGK
Sbjct: 73  LKAINVNKLTSAGCRVKIWVADWFAKLNNKMGGDLNKIKTVGQYFIEIWKATGMDFEGGK 132

Query: 141 VEFLWSSKEINARADEYWPLVLDIAQKNNLKRIIRCSQIMGRSEQDELTAAQIFYPCMQC 200
           VEFLWSSKEIN  AD+YWP VLDIAQ N+LKRI+RCSQIMGRSEQ++LTA+QIFYPCMQC
Sbjct: 133 VEFLWSSKEINGGADKYWPCVLDIAQNNSLKRIVRCSQIMGRSEQEDLTASQIFYPCMQC 192

Query: 201 ADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHMLPGLQQGQEKMSKSDQ 260
           ADIFFL+ADICQLGMDQRKVNVLAREYCD IKR+NKPIILSHHMLPGLQQGQEKMSKS+ 
Sbjct: 193 ADIFFLQADICQLGMDQRKVNVLAREYCDVIKRRNKPIILSHHMLPGLQQGQEKMSKSNP 252

Query: 261 SSAVFMEDEEAEVNVKIKKAYCPPKIVDGNPCLEYIKYLILPWFNEFTVERNEDNGGNKT 320
            S+++MEDEEAEVN+KI+KAYCPPKIV  NPCLEYI+YLI PWF EFT+E   DNGGNKT
Sbjct: 253 LSSIYMEDEEAEVNLKIEKAYCPPKIVQANPCLEYIRYLIFPWFKEFTMECGADNGGNKT 312

Query: 321 FQSFEELAADFESGELHPADLKPALSKSLNKILEPVRVHFRTDSNAKELLKRVKAYRVTK 380
           F+SFE+L  D+ESGE++P DLKPALSKSLNKILE +R HFR D NAKELLK VKAYRVT+
Sbjct: 313 FKSFEKLVVDYESGEVNPEDLKPALSKSLNKILESIREHFRKDKNAKELLKEVKAYRVTR 372



 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 63/91 (69%), Positives = 74/91 (81%), Gaps = 1/91 (1%)

Query: 19  DVAQSSNPNDQLTLEQKFQIVRSIGEECIQEDELLKLLANKPEPVCYDGFEPSGRMHIAQ 78
           D + +SN   Q +L Q+F+ V+S+GEEC QEDELL +LANKPEPVCYDGFE SGRM IAQ
Sbjct: 392 DESSNSNATSQQSL-QRFETVKSVGEECTQEDELLNILANKPEPVCYDGFELSGRMDIAQ 450

Query: 79  GVMKAINVNKLTSSGCRVKIWIADWFAKLNN 109
           G+MK I+ NKL S+GCRVKI IADWFAKLN 
Sbjct: 451 GIMKTIHANKLVSAGCRVKIVIADWFAKLNT 481


>Medtr1g007325.1 | tyrosine-tRNA ligase-like protein | HC |
           chr1:284325-281812 | 20130731
          Length = 236

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/256 (71%), Positives = 211/256 (82%), Gaps = 20/256 (7%)

Query: 125 LIEIWKAVGMDLEGGKVEFLWSSKEINARADEYWPLVLDIAQKNNLKRIIRCSQIMGRSE 184
           +IE+WKA+GMD+EGGKVEFLWSSKEI+ARADEYWPLVLDIAQK +++RI+ CS+IMGRSE
Sbjct: 1   MIEVWKAIGMDMEGGKVEFLWSSKEIDARADEYWPLVLDIAQKFSVQRILSCSEIMGRSE 60

Query: 185 QDELTAAQIFYPCMQCADIFFLKADICQLGMDQRKVNVLAREYCDDIKRKNKPIILSHHM 244
                                +K  +  L      +NVLAR+YCD IKRKNKP+ILSH+M
Sbjct: 61  N--------------------MKNPLVLLKYSIHALNVLARDYCDIIKRKNKPVILSHNM 100

Query: 245 LPGLQQGQEKMSKSDQSSAVFMEDEEAEVNVKIKKAYCPPKIVDGNPCLEYIKYLILPWF 304
           LPG QQGQEKMSKSD  S +FMEDEEA+VNVKIKKAYCPPKI +GNPCL+YIK L+LPWF
Sbjct: 101 LPGPQQGQEKMSKSDPLSCIFMEDEEADVNVKIKKAYCPPKITEGNPCLDYIKQLVLPWF 160

Query: 305 NEFTVERNEDNGGNKTFQSFEELAADFESGELHPADLKPALSKSLNKILEPVRVHFRTDS 364
           NEFTVER+ DNGGNKTF+SFEEL AD+E GELHPADLKPALSKSLNKILEPVR+HFRT+ 
Sbjct: 161 NEFTVERSADNGGNKTFKSFEELVADYEIGELHPADLKPALSKSLNKILEPVRLHFRTNK 220

Query: 365 NAKELLKRVKAYRVTK 380
            AKELLK+VKAY++TK
Sbjct: 221 EAKELLKKVKAYKITK 236