Miyakogusa Predicted Gene

Lj5g3v0614300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0614300.1 Non Characterized Hit- tr|G7LJI1|G7LJI1_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,62.16,0.0009,seg,NULL,CUFF.53371.1
         (85 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g086980.1 | hypothetical protein | HC | chr8:36070849-3607...    48   2e-06

>Medtr8g086980.1 | hypothetical protein | HC |
           chr8:36070849-36073169 | 20130731
          Length = 413

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/37 (62%), Positives = 26/37 (70%)

Query: 48  IGHLIVKDLEGPFTLVALSQHLNIETIWLRFFSCSVF 84
           I HL V+ LEGPFT VA S H NIE IWL F S S++
Sbjct: 377 IEHLTVEVLEGPFTPVAQSPHPNIELIWLNFLSFSLY 413