Miyakogusa Predicted Gene

Lj5g3v0611970.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0611970.2 Non Characterized Hit- tr|K4BA61|K4BA61_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,62.13,0,Prokaryotic type I DNA topoisomerase,DNA topoisomerase,
type IA, core domain; no description,Toprim ,CUFF.53333.2
         (1048 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0245s0010.2 | DNA topoisomerase I, bacterial protein | HC |...  1310   0.0  
Medtr0245s0010.1 | DNA topoisomerase I, bacterial protein | HC |...  1299   0.0  
Medtr1g009315.1 | DNA topoisomerase I, bacterial protein | HC | ...  1284   0.0  
Medtr1g009315.2 | DNA topoisomerase I, bacterial protein | HC | ...  1273   0.0  
Medtr1g009570.1 | DNA topoisomerase I, bacterial protein | HC | ...  1227   0.0  
Medtr0245s0010.3 | DNA topoisomerase I, bacterial protein | HC |...  1129   0.0  
Medtr2g066840.1 | DNA topoisomerase I | LC | chr2:27947361-27945...   402   e-112
Medtr0229s0020.1 | DNA topoisomerase | HC | scaffold0229:9521-51...   267   5e-71
Medtr3g096640.1 | DNA topoisomerase | HC | chr3:44222682-4420848...   101   4e-21
Medtr3g084800.2 | DNA topoisomerase I | HC | chr3:38297420-38308...    77   8e-14
Medtr3g084800.1 | DNA topoisomerase I | HC | chr3:38297430-38308...    77   8e-14

>Medtr0245s0010.2 | DNA topoisomerase I, bacterial protein | HC |
            scaffold0245:24305-1565 | 20130731
          Length = 1066

 Score = 1310 bits (3390), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/848 (74%), Positives = 703/848 (82%), Gaps = 5/848 (0%)

Query: 201  HDDSASTXXXXXXXXXXXXXXXPPL-KFTTKPLYPPLGXXXXXXXXXXXXXXIQKYLGDT 259
             D SAST                PL  FT KPLYPP+G              IQ+YLGD 
Sbjct: 220  QDSSASTRSKKKEVNSCQVDLEKPLGNFTGKPLYPPVGKSVMVVESVTKAKVIQRYLGDM 279

Query: 260  YEVLPSYGHVRDLAARSGSVRPDDDFSMVWEVPSAGWTHLKSFKVALSGAEVFILASDPD 319
            YEVLPSYGHVRDLA+RS SVRPDDDFSMVWEVPS+ WTHLKS   ALSGA   ILASDPD
Sbjct: 280  YEVLPSYGHVRDLASRSESVRPDDDFSMVWEVPSSAWTHLKSINAALSGANNLILASDPD 339

Query: 320  REGEAIAWHILEMLQQQGALHDNISVARVVFHEITEQSIKGALQAPREIDVNLVHAYLAR 379
            REGEAIAWHI+EMLQQQGALH+NI +ARVVFHEITEQSIK ALQAPREI+VNLVHAYLAR
Sbjct: 340  REGEAIAWHIIEMLQQQGALHNNIFLARVVFHEITEQSIKTALQAPREINVNLVHAYLAR 399

Query: 380  RALDYLIGFNISPLLWKKLPGCQSAGRVQSAALSLICDREMEIDKFKPQEYWTVEAQLRK 439
            RALDYLIGFNISPLLW+KLP CQSAGRVQSAALSLICDRE+EID+FKP+EYWT+EA    
Sbjct: 400  RALDYLIGFNISPLLWRKLPSCQSAGRVQSAALSLICDRELEIDQFKPKEYWTMEAMFNM 459

Query: 440  KELISNRNLTFSGHLTCFDSKKLTQFSITSDTEARDIESKLKSTDFKVISLKRNKVRRNP 499
            KE    ++LTF  HLT F+S KL QFSI S  EARDIESK+ S DF+VIS+KRNKVRR P
Sbjct: 460  KEQRLTKDLTFLAHLTHFNSNKLNQFSIISGEEARDIESKINSADFRVISMKRNKVRRKP 519

Query: 500  PTPYITSTLQQDAANKLHFTASHTMKLAQKLYEGVELADGVAEGLITYIRTDGFHISDGA 559
            PTPYITSTLQQDAANKL+F+ASHTMKLAQKLYEGVEL  G++ GLITYIRTDG HISD A
Sbjct: 520  PTPYITSTLQQDAANKLNFSASHTMKLAQKLYEGVELTSGISAGLITYIRTDGLHISDDA 579

Query: 560  VANIRSLIIERYGQNFAARSPPKYFKKVKNAQEAHEAIRPTDIHKLPSMLAGVLDEESLK 619
            VANIRSLIIERYGQNF A+SPPKYFKKVKNAQEAHEAIRPTDI KLPSMLAGVLDEESLK
Sbjct: 580  VANIRSLIIERYGQNFVAQSPPKYFKKVKNAQEAHEAIRPTDIRKLPSMLAGVLDEESLK 639

Query: 620  LYTLIWSRTVSCQMEPAIFEQVQLDIGNADMSIMLRSASSKVEFPGYRAAFEDIDMEVVQ 679
            LYTLIWSRTVSCQME A+ E++QLD+GNAD SI+LRSASS+VEFPGYRA F DI  E  +
Sbjct: 640  LYTLIWSRTVSCQMEQAVLEKIQLDVGNADQSIVLRSASSRVEFPGYRAVFTDIVTEAGR 699

Query: 680  DKHNDRSYRDQAFEVLNSIKTGDLLHLVQAELNQHHTQPPPRYSEASLVKKLEELGIGRP 739
            D+ +D S  D AFEVLNS+KT DLLHLVQ E +QHHTQPPPRYSEASLVKKLEELGIGRP
Sbjct: 700  DRDSDGSNHDLAFEVLNSLKTDDLLHLVQTEASQHHTQPPPRYSEASLVKKLEELGIGRP 759

Query: 740  STYASTIKVLKDRNYVTVKSRVLSPEFRGRMVSAFLSHHFSEVMDYNFTADMETELDNVS 799
            STYAST+KVLKDRNYVTVKSRV+SPEFRGRMVSAFLSHHFSEV DYNFTADMETELDNVS
Sbjct: 760  STYASTLKVLKDRNYVTVKSRVISPEFRGRMVSAFLSHHFSEVTDYNFTADMETELDNVS 819

Query: 800  GGLTEWKGLLRDYWTRFKSYCDSTSNVHIHQVEKMLEKKFGQYLFASLRDQKRVCPSCME 859
             G T+WKGLL DYWTRFKSYCD TS VHIHQVEKMLEKKF  YLF S  ++ R CPSC E
Sbjct: 820  AGTTKWKGLLGDYWTRFKSYCDRTSGVHIHQVEKMLEKKFEDYLFGSFPNKSRSCPSCTE 879

Query: 860  GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY-GVEEDEDAPQPNTT-IEEPKVLGVISG 917
            GTLIFKVSRFG+GYFIGCDQHPRCKYIAK L  G EE++D PQPN+T IEEPKVLG ++ 
Sbjct: 880  GTLIFKVSRFGSGYFIGCDQHPRCKYIAKRLLSGDEEEDDTPQPNSTMIEEPKVLG-LNS 938

Query: 918  SNEKVLFKSGPYGCYVQLGEDRKGYAPKRASVPSFMNANNITLEDGLELLRYPLTLGKHP 977
            SNEKVL K+GPYG YVQLGED K Y PKR SVP   + ++ TLE+ L LL+YP+TLGKHP
Sbjct: 939  SNEKVLLKNGPYGIYVQLGEDGKEYTPKRTSVPYVKDLDSTTLEEALALLQYPVTLGKHP 998

Query: 978  KDGRPVILRLSQGGFTVKHRSKSFHVPKDMNPRDVTFEKALKFLLGDNVTNTGRPKS-KP 1036
             DG+PVIL++++ G++++H      VPKDM P ++T+EKAL+ LLGD V   GRPK  K 
Sbjct: 999  DDGKPVILKVAKLGYSIRHGKTIAPVPKDMKPSEITYEKALELLLGDKVRTVGRPKDPKT 1058

Query: 1037 KVEEDEAV 1044
            KV + EA+
Sbjct: 1059 KVADVEAL 1066


>Medtr0245s0010.1 | DNA topoisomerase I, bacterial protein | HC |
            scaffold0245:24305-1565 | 20130731
          Length = 1058

 Score = 1299 bits (3361), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/840 (74%), Positives = 695/840 (82%), Gaps = 7/840 (0%)

Query: 201  HDDSASTXXXXXXXXXXXXXXXPPL-KFTTKPLYPPLGXXXXXXXXXXXXXXIQKYLGDT 259
             D SAST                PL  FT KPLYPP+G              IQ+YLGD 
Sbjct: 220  QDSSASTRSKKKEVNSCQVDLEKPLGNFTGKPLYPPVGKSVMVVESVTKAKVIQRYLGDM 279

Query: 260  YEVLPSYGHVRDLAARSGSVRPDDDFSMVWEVPSAGWTHLKSFKVALSGAEVFILASDPD 319
            YEVLPSYGHVRDLA+RS SVRPDDDFSMVWEVPS+ WTHLKS   ALSGA   ILASDPD
Sbjct: 280  YEVLPSYGHVRDLASRSESVRPDDDFSMVWEVPSSAWTHLKSINAALSGANNLILASDPD 339

Query: 320  REGEAIAWHILEMLQQQGALHDNISVARVVFHEITEQSIKGALQAPREIDVNLVHAYLAR 379
            REGEAIAWHI+EMLQQQGALH+NI +ARVVFHEITEQSIK ALQAPREI+VNLVHAYLAR
Sbjct: 340  REGEAIAWHIIEMLQQQGALHNNIFLARVVFHEITEQSIKTALQAPREINVNLVHAYLAR 399

Query: 380  RALDYLIGFNISPLLWKKLPGCQSAGRVQSAALSLICDREMEIDKFKPQEYWTVEAQLRK 439
            RALDYLIGFNISPLLW+KLP CQSAGRVQSAALSLICDRE+EID+FKP+EYWT+EA    
Sbjct: 400  RALDYLIGFNISPLLWRKLPSCQSAGRVQSAALSLICDRELEIDQFKPKEYWTMEAMFNM 459

Query: 440  KELISNRNLTFSGHLTCFDSKKLTQFSITSDTEARDIESKLKSTDFKVISLKRNKVRRNP 499
            KE    ++LTF  HLT F+S KL QFSI S  EARDIESK+ S DF+VIS+KRNKVRR P
Sbjct: 460  KEQRLTKDLTFLAHLTHFNSNKLNQFSIISGEEARDIESKINSADFRVISMKRNKVRRKP 519

Query: 500  PTPYITSTLQQDAANKLHFTASHTMKLAQKLYEGVELADGVAEGLITYIRTDGFHISDGA 559
            PTPYITSTLQQDAANKL+F+ASHTMKLAQKLYEGVEL  G++ GLITYIRTDG HISD A
Sbjct: 520  PTPYITSTLQQDAANKLNFSASHTMKLAQKLYEGVELTSGISAGLITYIRTDGLHISDDA 579

Query: 560  VANIRSLIIERYGQNFAARSPPKYFKKVKNAQEAHEAIRPTDIHKLPSMLAGVLDEESLK 619
            VANIRSLIIERYGQNF A+SPPKYFKKVKNAQEAHEAIRPTDI KLPSMLAGVLDEESLK
Sbjct: 580  VANIRSLIIERYGQNFVAQSPPKYFKKVKNAQEAHEAIRPTDIRKLPSMLAGVLDEESLK 639

Query: 620  LYTLIWSRTVSCQMEPAIFEQVQLDIGNADMSIMLRSASSKVEFPGYRAAFEDIDMEVVQ 679
            LYTLIWSRTVSCQME A+ E++QLD+GNAD SI+LRSASS+VEFPGYRA F DI  E  +
Sbjct: 640  LYTLIWSRTVSCQMEQAVLEKIQLDVGNADQSIVLRSASSRVEFPGYRAVFTDIVTEAGR 699

Query: 680  DKHNDRSYRDQAFEVLNSIKTGDLLHLVQAELNQHHTQPPPRYSEASLVKKLEELGIGRP 739
            D+ +D S  D AFEVLNS+KT DLLHLVQ E +QHHTQPPPRYSEASLVKKLEELGIGRP
Sbjct: 700  DRDSDGSNHDLAFEVLNSLKTDDLLHLVQTEASQHHTQPPPRYSEASLVKKLEELGIGRP 759

Query: 740  STYASTIKVLKDRNYVTVKSRVLSPEFRGRMVSAFLSHHFSEVMDYNFTADMETELDNVS 799
            STYAST+KVLKDRNYVTVKSRV+SPEFRGRMVSAFLSHHFSEV DYNFTADMETELDNVS
Sbjct: 760  STYASTLKVLKDRNYVTVKSRVISPEFRGRMVSAFLSHHFSEVTDYNFTADMETELDNVS 819

Query: 800  GGLTEWKGLLRDYWTRFKSYCDSTSNVHIHQVEKMLEKKFGQYLFASLRDQKRVCPSCME 859
             G T+WKGLL DYWTRFKSYCD TS VHIHQVEKMLEKKF  YLF S  ++ R CPSC E
Sbjct: 820  AGTTKWKGLLGDYWTRFKSYCDRTSGVHIHQVEKMLEKKFEDYLFGSFPNKSRSCPSCTE 879

Query: 860  GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY-GVEEDEDAPQPNTT-IEEPKVLGVISG 917
            GTLIFKVSRFG+GYFIGCDQHPRCKYIAK L  G EE++D PQPN+T IEEPKVLG ++ 
Sbjct: 880  GTLIFKVSRFGSGYFIGCDQHPRCKYIAKRLLSGDEEEDDTPQPNSTMIEEPKVLG-LNS 938

Query: 918  SNEKVLFKSGPYGCYVQLGEDRKGYAPKRASVPSFMNANNITLEDGLELLRYPLTLGKHP 977
            SNEKVL K+GPYG YVQLGED K Y PKR SVP   + ++ TLE+ L LL+YP+TLGKHP
Sbjct: 939  SNEKVLLKNGPYGIYVQLGEDGKEYTPKRTSVPYVKDLDSTTLEEALALLQYPVTLGKHP 998

Query: 978  KDGRPVILRLSQGGFTVKHRSKSFHVPKDMNPRDVTFEKALKFLLGDNVTNTGRPKSKPK 1037
             DG+PVIL++++ G++++H      VPK M P ++T EKAL+FL  DNV   G   +KPK
Sbjct: 999  DDGKPVILKVAKLGYSIRHGKTIAPVPKSMKPSEITLEKALEFLSDDNVKTVG---AKPK 1055


>Medtr1g009315.1 | DNA topoisomerase I, bacterial protein | HC |
            chr1:1296395-1275993 | 20130731
          Length = 1066

 Score = 1284 bits (3323), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/848 (73%), Positives = 697/848 (82%), Gaps = 5/848 (0%)

Query: 201  HDDSASTXXXXXXXXXXXXXXXPPL-KFTTKPLYPPLGXXXXXXXXXXXXXXIQKYLGDT 259
             D SAST                PL  FT KPLYPP+G              IQ+YLGD 
Sbjct: 220  QDSSASTRSKKKEVNSCQVDLEKPLGNFTGKPLYPPVGKSVMVVESVTKAKVIQRYLGDM 279

Query: 260  YEVLPSYGHVRDLAARSGSVRPDDDFSMVWEVPSAGWTHLKSFKVALSGAEVFILASDPD 319
            YEVLPSYGHVRDLA+RSGSVRPDDDFSMVWEVPS+ WTHLKS   ALSGA   ILASDPD
Sbjct: 280  YEVLPSYGHVRDLASRSGSVRPDDDFSMVWEVPSSAWTHLKSINAALSGANNLILASDPD 339

Query: 320  REGEAIAWHILEMLQQQGALHDNISVARVVFHEITEQSIKGALQAPREIDVNLVHAYLAR 379
            REGEAIAWHI+EMLQQQGALH+NI +ARVVFHEITEQSIK ALQAPREI+VNLVHAYLAR
Sbjct: 340  REGEAIAWHIIEMLQQQGALHNNIFLARVVFHEITEQSIKTALQAPREINVNLVHAYLAR 399

Query: 380  RALDYLIGFNISPLLWKKLPGCQSAGRVQSAALSLICDREMEIDKFKPQEYWTVEAQLRK 439
            RALDYLIGFNISPLLW+KLP CQSAGRVQSAALSLICDRE+EID+FKP+EYWT+EA    
Sbjct: 400  RALDYLIGFNISPLLWRKLPSCQSAGRVQSAALSLICDRELEIDQFKPKEYWTMEAMFNM 459

Query: 440  KELISNRNLTFSGHLTCFDSKKLTQFSITSDTEARDIESKLKSTDFKVISLKRNKVRRNP 499
            KE    ++LTF  HLT F+S KL QFSI S  EARDIESK+ S DF+VIS+KRNKVRR P
Sbjct: 460  KEQRLTKDLTFLAHLTHFNSNKLNQFSIISGEEARDIESKINSADFRVISMKRNKVRRKP 519

Query: 500  PTPYITSTLQQDAANKLHFTASHTMKLAQKLYEGVELADGVAEGLITYIRTDGFHISDGA 559
            PTPYITSTLQQDAANKL+F+ASHTMKLAQKLYEGVEL  G++ GLITYIRTDG HISD A
Sbjct: 520  PTPYITSTLQQDAANKLNFSASHTMKLAQKLYEGVELTSGISAGLITYIRTDGLHISDDA 579

Query: 560  VANIRSLIIERYGQNFAARSPPKYFKKVKNAQEAHEAIRPTDIHKLPSMLAGVLDEESLK 619
            VANIRSLIIERYGQNF A+SPPKYFKKVKNAQEAHEAIRPTDI KLPSMLAGVLDEESLK
Sbjct: 580  VANIRSLIIERYGQNFVAQSPPKYFKKVKNAQEAHEAIRPTDIRKLPSMLAGVLDEESLK 639

Query: 620  LYTLIWSRTVSCQMEPAIFEQVQLDIGNADMSIMLRSASSKVEFPGYRAAFEDIDMEVVQ 679
            LYTLIWSRTVSCQME A+ E++QLD+GNAD SI+LRSASS+VEFPGYRA F DI  E  +
Sbjct: 640  LYTLIWSRTVSCQMEQAVLEKIQLDVGNADQSIVLRSASSRVEFPGYRAVFTDIVTEAGR 699

Query: 680  DKHNDRSYRDQAFEVLNSIKTGDLLHLVQAELNQHHTQPPPRYSEASLVKKLEELGIGRP 739
            D+ +D S  D AFEVLNS+KT DLLHLVQ E +QHHTQPPPRYSEASLV KL+E+GIGR 
Sbjct: 700  DRDSDGSNHDLAFEVLNSLKTDDLLHLVQTEASQHHTQPPPRYSEASLVNKLDEIGIGRA 759

Query: 740  STYASTIKVLKDRNYVTVKSRVLSPEFRGRMVSAFLSHHFSEVMDYNFTADMETELDNVS 799
            ++YA T++ L+DRNYVTVKSRV+SPEFRGRMVSAFLSHHFSEV DYNFTADMETELDNVS
Sbjct: 760  ASYAQTLQGLQDRNYVTVKSRVISPEFRGRMVSAFLSHHFSEVTDYNFTADMETELDNVS 819

Query: 800  GGLTEWKGLLRDYWTRFKSYCDSTSNVHIHQVEKMLEKKFGQYLFASLRDQKRVCPSCME 859
             G T WK L+RDY TRFK+ C+ TSNVHI QVEKMLEKKF  YLF S  ++ R CPSC E
Sbjct: 820  AGTTNWKSLVRDYSTRFKTCCERTSNVHIRQVEKMLEKKFEDYLFGSFPNKSRSCPSCTE 879

Query: 860  GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY-GVEEDEDAPQPNTT-IEEPKVLGVISG 917
            GTLIFKVSRFG+GYFIGCDQHPRCKYIAK L  G EE++D PQPN+T IEEPKVLG ++ 
Sbjct: 880  GTLIFKVSRFGSGYFIGCDQHPRCKYIAKRLLSGDEEEDDTPQPNSTMIEEPKVLG-LNS 938

Query: 918  SNEKVLFKSGPYGCYVQLGEDRKGYAPKRASVPSFMNANNITLEDGLELLRYPLTLGKHP 977
            SNEKVL K+GPYG YVQLGED K Y PKR SVP   + ++ TLE+ L LL+YP+TLGKHP
Sbjct: 939  SNEKVLLKNGPYGIYVQLGEDGKEYTPKRTSVPYVKDLDSTTLEEALALLQYPVTLGKHP 998

Query: 978  KDGRPVILRLSQGGFTVKHRSKSFHVPKDMNPRDVTFEKALKFLLGDNVTNTGRPKS-KP 1036
             DG+PVIL++++ G++++H      VPKDM P ++T+EKAL+ LLGD V   GRPK  K 
Sbjct: 999  DDGKPVILKVAKLGYSIRHGKTIAPVPKDMKPSEITYEKALELLLGDKVRTVGRPKDPKT 1058

Query: 1037 KVEEDEAV 1044
            KV + EA+
Sbjct: 1059 KVADVEAL 1066


>Medtr1g009315.2 | DNA topoisomerase I, bacterial protein | HC |
            chr1:1296395-1279071 | 20130731
          Length = 1058

 Score = 1273 bits (3293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/840 (73%), Positives = 689/840 (82%), Gaps = 7/840 (0%)

Query: 201  HDDSASTXXXXXXXXXXXXXXXPPL-KFTTKPLYPPLGXXXXXXXXXXXXXXIQKYLGDT 259
             D SAST                PL  FT KPLYPP+G              IQ+YLGD 
Sbjct: 220  QDSSASTRSKKKEVNSCQVDLEKPLGNFTGKPLYPPVGKSVMVVESVTKAKVIQRYLGDM 279

Query: 260  YEVLPSYGHVRDLAARSGSVRPDDDFSMVWEVPSAGWTHLKSFKVALSGAEVFILASDPD 319
            YEVLPSYGHVRDLA+RSGSVRPDDDFSMVWEVPS+ WTHLKS   ALSGA   ILASDPD
Sbjct: 280  YEVLPSYGHVRDLASRSGSVRPDDDFSMVWEVPSSAWTHLKSINAALSGANNLILASDPD 339

Query: 320  REGEAIAWHILEMLQQQGALHDNISVARVVFHEITEQSIKGALQAPREIDVNLVHAYLAR 379
            REGEAIAWHI+EMLQQQGALH+NI +ARVVFHEITEQSIK ALQAPREI+VNLVHAYLAR
Sbjct: 340  REGEAIAWHIIEMLQQQGALHNNIFLARVVFHEITEQSIKTALQAPREINVNLVHAYLAR 399

Query: 380  RALDYLIGFNISPLLWKKLPGCQSAGRVQSAALSLICDREMEIDKFKPQEYWTVEAQLRK 439
            RALDYLIGFNISPLLW+KLP CQSAGRVQSAALSLICDRE+EID+FKP+EYWT+EA    
Sbjct: 400  RALDYLIGFNISPLLWRKLPSCQSAGRVQSAALSLICDRELEIDQFKPKEYWTMEAMFNM 459

Query: 440  KELISNRNLTFSGHLTCFDSKKLTQFSITSDTEARDIESKLKSTDFKVISLKRNKVRRNP 499
            KE    ++LTF  HLT F+S KL QFSI S  EARDIESK+ S DF+VIS+KRNKVRR P
Sbjct: 460  KEQRLTKDLTFLAHLTHFNSNKLNQFSIISGEEARDIESKINSADFRVISMKRNKVRRKP 519

Query: 500  PTPYITSTLQQDAANKLHFTASHTMKLAQKLYEGVELADGVAEGLITYIRTDGFHISDGA 559
            PTPYITSTLQQDAANKL+F+ASHTMKLAQKLYEGVEL  G++ GLITYIRTDG HISD A
Sbjct: 520  PTPYITSTLQQDAANKLNFSASHTMKLAQKLYEGVELTSGISAGLITYIRTDGLHISDDA 579

Query: 560  VANIRSLIIERYGQNFAARSPPKYFKKVKNAQEAHEAIRPTDIHKLPSMLAGVLDEESLK 619
            VANIRSLIIERYGQNF A+SPPKYFKKVKNAQEAHEAIRPTDI KLPSMLAGVLDEESLK
Sbjct: 580  VANIRSLIIERYGQNFVAQSPPKYFKKVKNAQEAHEAIRPTDIRKLPSMLAGVLDEESLK 639

Query: 620  LYTLIWSRTVSCQMEPAIFEQVQLDIGNADMSIMLRSASSKVEFPGYRAAFEDIDMEVVQ 679
            LYTLIWSRTVSCQME A+ E++QLD+GNAD SI+LRSASS+VEFPGYRA F DI  E  +
Sbjct: 640  LYTLIWSRTVSCQMEQAVLEKIQLDVGNADQSIVLRSASSRVEFPGYRAVFTDIVTEAGR 699

Query: 680  DKHNDRSYRDQAFEVLNSIKTGDLLHLVQAELNQHHTQPPPRYSEASLVKKLEELGIGRP 739
            D+ +D S  D AFEVLNS+KT DLLHLVQ E +QHHTQPPPRYSEASLV KL+E+GIGR 
Sbjct: 700  DRDSDGSNHDLAFEVLNSLKTDDLLHLVQTEASQHHTQPPPRYSEASLVNKLDEIGIGRA 759

Query: 740  STYASTIKVLKDRNYVTVKSRVLSPEFRGRMVSAFLSHHFSEVMDYNFTADMETELDNVS 799
            ++YA T++ L+DRNYVTVKSRV+SPEFRGRMVSAFLSHHFSEV DYNFTADMETELDNVS
Sbjct: 760  ASYAQTLQGLQDRNYVTVKSRVISPEFRGRMVSAFLSHHFSEVTDYNFTADMETELDNVS 819

Query: 800  GGLTEWKGLLRDYWTRFKSYCDSTSNVHIHQVEKMLEKKFGQYLFASLRDQKRVCPSCME 859
             G T WK L+RDY TRFK+ C+ TSNVHI QVEKMLEKKF  YLF S  ++ R CPSC E
Sbjct: 820  AGTTNWKSLVRDYSTRFKTCCERTSNVHIRQVEKMLEKKFEDYLFGSFPNKSRSCPSCTE 879

Query: 860  GTLIFKVSRFGAGYFIGCDQHPRCKYIAKTLY-GVEEDEDAPQPNTT-IEEPKVLGVISG 917
            GTLIFKVSRFG+GYFIGCDQHPRCKYIAK L  G EE++D PQPN+T IEEPKVLG ++ 
Sbjct: 880  GTLIFKVSRFGSGYFIGCDQHPRCKYIAKRLLSGDEEEDDTPQPNSTMIEEPKVLG-LNS 938

Query: 918  SNEKVLFKSGPYGCYVQLGEDRKGYAPKRASVPSFMNANNITLEDGLELLRYPLTLGKHP 977
            SNEKVL K+GPYG YVQLGED K Y PKR SVP   + ++ TLE+ L LL+YP+TLGKHP
Sbjct: 939  SNEKVLLKNGPYGIYVQLGEDGKEYTPKRTSVPYVKDLDSTTLEEALALLQYPVTLGKHP 998

Query: 978  KDGRPVILRLSQGGFTVKHRSKSFHVPKDMNPRDVTFEKALKFLLGDNVTNTGRPKSKPK 1037
             DG+PVIL++++ G++++H      VPK M P ++T EKAL+FL  DNV   G   +KPK
Sbjct: 999  DDGKPVILKVAKLGYSIRHGKTIAPVPKSMKPSEITLEKALEFLSDDNVKTVG---AKPK 1055


>Medtr1g009570.1 | DNA topoisomerase I, bacterial protein | HC |
            chr1:1314837-1299615 | 20130731
          Length = 960

 Score = 1227 bits (3175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 590/821 (71%), Positives = 672/821 (81%), Gaps = 5/821 (0%)

Query: 226  KFTTKPLYPPLGXXXXXXXXXXXXXXIQKYLGDTYEVLPSYGHVRDLAARSGSVRPDDDF 285
            KFT KPLYPP+G              IQ+YLGD YEVLPSYGHVRDLA+RS SVRPDDDF
Sbjct: 143  KFTGKPLYPPVGKSVMVVESVTKAKVIQRYLGDMYEVLPSYGHVRDLASRSESVRPDDDF 202

Query: 286  SMVWEVPSAGWTHLKSFKVALSGAEVFILASDPDREGEAIAWHILEMLQQQGALHDNISV 345
            SMVWEVPS+ WTHLKS   ALSGA   ILASDPDREGEAIAWHI+EMLQQQGALH+NI +
Sbjct: 203  SMVWEVPSSAWTHLKSINAALSGANNLILASDPDREGEAIAWHIIEMLQQQGALHNNIFL 262

Query: 346  ARVVFHEITEQSIKGALQAPREIDVNLVHAYLARRALDYLIGFNISPLLWKKLPGCQSAG 405
            ARVVFHEITEQSIK ALQAPREI+VNL HAYLARRALDYLIGFNISPLLW+KLP CQS G
Sbjct: 263  ARVVFHEITEQSIKIALQAPREINVNLFHAYLARRALDYLIGFNISPLLWRKLPSCQSVG 322

Query: 406  RVQSAALSLICDREMEIDKFKPQEYWTVEAQLRKKELISNRNLTFSGHLTCFDSKKLTQF 465
            RVQSAALSLICDRE+EID+FKP+EYWT+EA    KE    ++LTF  HLT F+S KL QF
Sbjct: 323  RVQSAALSLICDRELEIDQFKPKEYWTMEAMFNMKEQRLTKDLTFLAHLTHFNSNKLNQF 382

Query: 466  SITSDTEARDIESKLKSTDFKVISLKRNKVRRNPPTPYITSTLQQDAANKLHFTASHTMK 525
            SITS  EARD+ESK+ S +F+V+S+K +KV+ NPPTPYITSTLQQDAANKL+F+ASHTM 
Sbjct: 383  SITSGREARDVESKINSAEFRVVSMKISKVQSNPPTPYITSTLQQDAANKLNFSASHTMA 442

Query: 526  LAQKLYEGVELADGVAEGLITYIRTDGFHISDGAVANIRSLIIERYGQNFAARSPPKYFK 585
            LAQKLYEGVEL +G+  GLITYIRTDG HISD AVANIRSLIIE YG NF A+SPP+YF 
Sbjct: 443  LAQKLYEGVELRNGITVGLITYIRTDGLHISDEAVANIRSLIIESYGHNFVAQSPPQYFS 502

Query: 586  KVKNAQEAHEAIRPTDIHKLPSMLAGVLDEESLKLYTLIWSRTVSCQMEPAIFEQVQLDI 645
            KVKN QEAHEAIRPT+I  LPSMLAGVLDEESLKLYTLIWSRTVSCQMEPA  E++Q++ 
Sbjct: 503  KVKNEQEAHEAIRPTNIRNLPSMLAGVLDEESLKLYTLIWSRTVSCQMEPANLEKIQVEF 562

Query: 646  GNADMSIMLRSASSKVEFPGYRAAFEDIDMEVVQDKHNDRSYRDQAFEVLNSIKTGDLLH 705
            GN D SIMLRS+SS+VEFPGY+  F DI  E  +D+ +D S  D AFEVLNS+K  DLLH
Sbjct: 563  GNVDRSIMLRSSSSRVEFPGYQEVFTDIVTEAGRDRDSDGSNHDLAFEVLNSLKKEDLLH 622

Query: 706  LVQAELNQHHTQPPPRYSEASLVKKLEELGIGRPSTYASTIKVLKDRNYVTVKSRVLSPE 765
            LVQ    QHHTQPPPRYSEASLVKKLE+LGIGRPSTYAST+KVLKDRNYVTV +RVLSPE
Sbjct: 623  LVQTGARQHHTQPPPRYSEASLVKKLEDLGIGRPSTYASTLKVLKDRNYVTVNNRVLSPE 682

Query: 766  FRGRMVSAFLSHHFSEVMDYNFTADMETELDNVSGGLTEWKGLLRDYWTRFKSYCDSTSN 825
            FRGRMVSAFLSHHFSEV DY+FTAD+ETELDNVS G+T+WKGLL DYW RFKS CD  S+
Sbjct: 683  FRGRMVSAFLSHHFSEVTDYSFTADIETELDNVSAGITKWKGLLGDYWMRFKSNCDHASD 742

Query: 826  VHIHQVEKMLEKKFGQYLFASLRDQKRVCPSCMEGTLIFKVSRFGAGYFIGCDQHPRCKY 885
            + I+QVEKMLEKKFG +LF SL ++ R CPSC EGTLIFKV+RFG+GYFIGCDQHPRCK+
Sbjct: 743  IPIYQVEKMLEKKFGDFLFGSLPNKSRSCPSCTEGTLIFKVTRFGSGYFIGCDQHPRCKF 802

Query: 886  IAKTLYGVEEDEDAPQPNTTI-EEPKVLGVISGSNEKVLFKSGPYGCYVQLGEDRKGYAP 944
                LYG EE ED PQPN TI EEPK+LG  + SNEKVL K G Y  YVQLGEDRKG+ P
Sbjct: 803  --HILYGDEEKEDTPQPNITIGEEPKLLG-FNSSNEKVLLKRGSYAIYVQLGEDRKGHTP 859

Query: 945  KRASVPSFMNANNITLEDGLELLRYPLTLGKHPKDGRPVILRLSQGGFTVKHRSKSFHVP 1004
            KR +VP   +  + TLED L LL+YP TL KHP+DGRPVI++ ++ G++++HRS   HVP
Sbjct: 860  KRTTVPYVKDLESTTLEDALALLQYPFTLAKHPEDGRPVIIKAAKDGYSIRHRSTIAHVP 919

Query: 1005 KDMNPRDVTFEKALKFLLGDNVTNTGRP-KSKPKVEEDEAV 1044
            K+M    VT EKAL+ L G++  N G P K   +V++ EA+
Sbjct: 920  KNMKSSAVTLEKALELLSGEDARNVGGPHKRYSRVKDVEAL 960


>Medtr0245s0010.3 | DNA topoisomerase I, bacterial protein | HC |
           scaffold0245:24292-1613 | 20130731
          Length = 904

 Score = 1129 bits (2920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/685 (78%), Positives = 581/685 (84%), Gaps = 1/685 (0%)

Query: 201 HDDSASTXXXXXXXXXXXXXXXPPL-KFTTKPLYPPLGXXXXXXXXXXXXXXIQKYLGDT 259
            D SAST                PL  FT KPLYPP+G              IQ+YLGD 
Sbjct: 220 QDSSASTRSKKKEVNSCQVDLEKPLGNFTGKPLYPPVGKSVMVVESVTKAKVIQRYLGDM 279

Query: 260 YEVLPSYGHVRDLAARSGSVRPDDDFSMVWEVPSAGWTHLKSFKVALSGAEVFILASDPD 319
           YEVLPSYGHVRDLA+RS SVRPDDDFSMVWEVPS+ WTHLKS   ALSGA   ILASDPD
Sbjct: 280 YEVLPSYGHVRDLASRSESVRPDDDFSMVWEVPSSAWTHLKSINAALSGANNLILASDPD 339

Query: 320 REGEAIAWHILEMLQQQGALHDNISVARVVFHEITEQSIKGALQAPREIDVNLVHAYLAR 379
           REGEAIAWHI+EMLQQQGALH+NI +ARVVFHEITEQSIK ALQAPREI+VNLVHAYLAR
Sbjct: 340 REGEAIAWHIIEMLQQQGALHNNIFLARVVFHEITEQSIKTALQAPREINVNLVHAYLAR 399

Query: 380 RALDYLIGFNISPLLWKKLPGCQSAGRVQSAALSLICDREMEIDKFKPQEYWTVEAQLRK 439
           RALDYLIGFNISPLLW+KLP CQSAGRVQSAALSLICDRE+EID+FKP+EYWT+EA    
Sbjct: 400 RALDYLIGFNISPLLWRKLPSCQSAGRVQSAALSLICDRELEIDQFKPKEYWTMEAMFNM 459

Query: 440 KELISNRNLTFSGHLTCFDSKKLTQFSITSDTEARDIESKLKSTDFKVISLKRNKVRRNP 499
           KE    ++LTF  HLT F+S KL QFSI S  EARDIESK+ S DF+VIS+KRNKVRR P
Sbjct: 460 KEQRLTKDLTFLAHLTHFNSNKLNQFSIISGEEARDIESKINSADFRVISMKRNKVRRKP 519

Query: 500 PTPYITSTLQQDAANKLHFTASHTMKLAQKLYEGVELADGVAEGLITYIRTDGFHISDGA 559
           PTPYITSTLQQDAANKL+F+ASHTMKLAQKLYEGVEL  G++ GLITYIRTDG HISD A
Sbjct: 520 PTPYITSTLQQDAANKLNFSASHTMKLAQKLYEGVELTSGISAGLITYIRTDGLHISDDA 579

Query: 560 VANIRSLIIERYGQNFAARSPPKYFKKVKNAQEAHEAIRPTDIHKLPSMLAGVLDEESLK 619
           VANIRSLIIERYGQNF A+SPPKYFKKVKNAQEAHEAIRPTDI KLPSMLAGVLDEESLK
Sbjct: 580 VANIRSLIIERYGQNFVAQSPPKYFKKVKNAQEAHEAIRPTDIRKLPSMLAGVLDEESLK 639

Query: 620 LYTLIWSRTVSCQMEPAIFEQVQLDIGNADMSIMLRSASSKVEFPGYRAAFEDIDMEVVQ 679
           LYTLIWSRTVSCQME A+ E++QLD+GNAD SI+LRSASS+VEFPGYRA F DI  E  +
Sbjct: 640 LYTLIWSRTVSCQMEQAVLEKIQLDVGNADQSIVLRSASSRVEFPGYRAVFTDIVTEAGR 699

Query: 680 DKHNDRSYRDQAFEVLNSIKTGDLLHLVQAELNQHHTQPPPRYSEASLVKKLEELGIGRP 739
           D+ +D S  D AFEVLNS+KT DLLHLVQ E +QHHTQPPPRYSEASLVKKLEELGIGRP
Sbjct: 700 DRDSDGSNHDLAFEVLNSLKTDDLLHLVQTEASQHHTQPPPRYSEASLVKKLEELGIGRP 759

Query: 740 STYASTIKVLKDRNYVTVKSRVLSPEFRGRMVSAFLSHHFSEVMDYNFTADMETELDNVS 799
           STYAST+KVLKDRNYVTVKSRV+SPEFRGRMVSAFLSHHFSEV DYNFTADMETELDNVS
Sbjct: 760 STYASTLKVLKDRNYVTVKSRVISPEFRGRMVSAFLSHHFSEVTDYNFTADMETELDNVS 819

Query: 800 GGLTEWKGLLRDYWTRFKSYCDSTSNVHIHQVEKMLEKKFGQYLFASLRDQKRVCPSCME 859
            G T+WKGLL DYWTRFKSYCD TS VHIHQVEKMLEKKF  YLF S  ++ R CPSC E
Sbjct: 820 AGTTKWKGLLGDYWTRFKSYCDRTSGVHIHQVEKMLEKKFEDYLFGSFPNKSRSCPSCTE 879

Query: 860 GTLIFKVSRFGAGYFIGCDQHPRCK 884
           GTLIFKVSRFG+GYFIGCDQHPRCK
Sbjct: 880 GTLIFKVSRFGSGYFIGCDQHPRCK 904


>Medtr2g066840.1 | DNA topoisomerase I | LC | chr2:27947361-27945165
           | 20130731
          Length = 502

 Score =  402 bits (1034), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/387 (51%), Positives = 267/387 (68%), Gaps = 5/387 (1%)

Query: 223 PPLKFTTKPLYPPLGXXXXXXXXXXXXXXIQKYLGDTYEVLPSYGHVRDLAARSGSVRPD 282
           P L+FT K LYPP+G              I+ YLG  YEVL   G V DL     S   D
Sbjct: 120 PSLRFTGKSLYPPVGKSVVVVESLDKARTIRSYLGGMYEVLSCNGLVMDLDPGQNSASLD 179

Query: 283 DDFSMVWEVPSAGWTHLKSFKVALSGAEVFILASDPDREGEAIAWHILEMLQQQ-GALHD 341
           +DF + WE+ ++  T +K    AL G    I A DP  EGE IAW I+ +L+++  +L +
Sbjct: 180 NDFCLFWEISNSSQTRVKRISAALKGVNNLIFAFDPSPEGETIAWQIIHILRKKHRSLQE 239

Query: 342 NISVARVVFHEITEQSIKGALQAPREIDVNLVHAYLARRALDYLIGFNISPLLWKKLPGC 401
           +I +ARVVF+EITEQSIK ALQ PREID+NLV++YLA+R +D+L GFNISPL+ +KLP C
Sbjct: 240 DILLARVVFNEITEQSIKAALQEPREIDMNLVNSYLAKRVIDFLFGFNISPLVLRKLPSC 299

Query: 402 QSAGRVQSAALSLICDREMEIDKFKPQEYWTVEAQLRKKELISNRNLTFSGHLTCFDSKK 461
           +S  R +  ALSL+CDRE EI+ F+ +EYWT+  QL++    +NR+L F   LT  DS++
Sbjct: 300 KSPRRFEFPALSLLCDRESEINSFRSREYWTLYPQLQR----TNRDLPFRTLLTHIDSRE 355

Query: 462 LTQFSITSDTEARDIESKLKSTDFKVISLKRNKVRRNPPTPYITSTLQQDAANKLHFTAS 521
           L +FS+ S  EA +I+S++ S  F+VI + R+K+ +  PTPY TSTLQQDAA  L+F++S
Sbjct: 356 LNKFSVASVEEANEIQSRIYSAQFQVIGITRSKISKMSPTPYSTSTLQQDAARILNFSSS 415

Query: 522 HTMKLAQKLYEGVELADGVAEGLITYIRTDGFHISDGAVANIRSLIIERYGQNFAARSPP 581
            TMK+A+KLYEGV+    +  GLIT   TDG HIS+ AV++IRS+II+RYGQNF A+SPP
Sbjct: 416 ITMKIARKLYEGVKFHKNIRAGLITCFITDGLHISEEAVSDIRSVIIQRYGQNFVAQSPP 475

Query: 582 KYFKKVKNAQEAHEAIRPTDIHKLPSM 608
           +   KVKNA E+HEAIRPTDI KLP M
Sbjct: 476 ENVIKVKNALESHEAIRPTDIRKLPCM 502


>Medtr0229s0020.1 | DNA topoisomerase | HC | scaffold0229:9521-5124 |
            20130731
          Length = 257

 Score =  267 bits (682), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 132/209 (63%), Positives = 160/209 (76%), Gaps = 6/209 (2%)

Query: 831  VEKMLEKKFGQYLFASLRDQKRVCPSCMEGTLIFKVSRFGAGYFIGCDQHPRCKYIAKTL 890
            VEKMLEKKF  YLF S  ++ R CPSC EGTLIFKVSRFG+GYFIGCDQHPRCKYIAK L
Sbjct: 50   VEKMLEKKFEDYLFGSFPNKSRSCPSCTEGTLIFKVSRFGSGYFIGCDQHPRCKYIAKRL 109

Query: 891  Y-GVEEDEDAPQPNTT-IEEPKVLGVISGSNEKVLFKSGPYGCYVQLGEDRKGYAPKRAS 948
              G EE++D PQPN+T IEEPKVLG ++ SNEKVL K+GPYG YVQLGED K Y PKR S
Sbjct: 110  LSGDEEEDDTPQPNSTMIEEPKVLG-LNSSNEKVLLKNGPYGIYVQLGEDGKEYTPKRTS 168

Query: 949  VPSFMNANNITLEDGLELLRYPLTLGKHPKDGRPVILRLSQGGFTVKHRSKSFHVPKDMN 1008
            VP   + ++ TLE+ L LL+YP+TLGKHP DG+PVIL++++ G++++H      VPK M 
Sbjct: 169  VPYVKDLDSTTLEEALALLQYPVTLGKHPDDGKPVILKVAKLGYSIRHGKTIAPVPKSMK 228

Query: 1009 PRDVTFEKALKFLLGDNVTNTGRPKSKPK 1037
            P ++T EKAL+FL  DNV   G   +KPK
Sbjct: 229  PSEITLEKALEFLSDDNVKTVG---AKPK 254


>Medtr3g096640.1 | DNA topoisomerase | HC | chr3:44222682-44208485 |
           20130731
          Length = 956

 Score =  101 bits (252), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 144/614 (23%), Positives = 261/614 (42%), Gaps = 92/614 (14%)

Query: 309 AEVFILASDPDREGEAIAWHILEMLQQQGALHDNISVARVVFHEITEQSIKGALQAPREI 368
            +  IL  D DREGE IA+ ++ +     A + N+++ R  F  + ++ I  A+Q   E 
Sbjct: 113 CQWLILWLDCDREGENIAFEVINVCT---AANPNLTIKRARFSALIDREIHQAVQNLVEP 169

Query: 369 DVNLVHAYLARRALDYLIGFNIS---PLLWKKL----------PGCQSAGRVQSAALSLI 415
           +     A  AR+ +D  IG   +    +L K                S G  Q   L  +
Sbjct: 170 NKWFADAVDARQEIDLRIGATFTRFQTMLMKDAFVIDTVTDGRNTVLSYGPCQFPTLGFV 229

Query: 416 CDREMEIDKFKPQEYWTVEAQLRKKELISNRNLTFSGHL---TCFDSKKLTQFSITSDTE 472
            +R  EI   +P+E+W ++   R  E ++N +    GHL   TC  +  + +  I   T 
Sbjct: 230 VERYWEIQAHEPEEFWLIKCSHRSDEGVANFSWE-RGHLFDYTC--AVIIYEMCIEEPT- 285

Query: 473 ARDIESKLKSTDFKVISLKRNKVRRNPPTPYITSTLQQDAANKLHFTASHTMKLAQKLYE 532
                    +T  KV   ++ K    PP P  T  L++ A+     ++  TMK+A++LY+
Sbjct: 286 ---------ATVTKVTPKEKPKY---PPHPLSTIELEKRASRYFRMSSERTMKVAEELYQ 333

Query: 533 GVELADGVAEGLITYIRTDGFHISDGAVANIRSLIIERYGQN----FAARSPPKYFKKVK 588
           G         G I+Y RT+  + S  +  ++ +++ E+ G      +A R         +
Sbjct: 334 G---------GFISYPRTETDNFS--SRTDLHAIVQEQQGHPEWGIYAQRLLDPGAGLWR 382

Query: 589 NAQ------EAHEAIRPTDIHKLPSMLAGVLDEESLKLYTLIWSRTVSCQMEPAIFEQVQ 642
           N +      +AH  I PT   K  +  +G   ++  KLY L+    ++C  +PA+  +  
Sbjct: 383 NPRGGGHDDQAHPPIHPT---KFSAGESG-WSQDHRKLYELVVRHFLACVSKPALGAETT 438

Query: 643 LDIGNADMSIMLRSASSKVEFPGYRAAFEDIDMEVVQDKHNDRSYRDQAFEVLNSIKTGD 702
           ++I   D++    SA  +V        + DI    + D+ +          ++ +   G+
Sbjct: 439 VEI---DIAGERFSACGRVIL---ERNYLDI---YIYDRWDG--------SMIPNYAIGE 481

Query: 703 LLHLVQAELNQHHTQPPPRYSEASLVKKLEELGIGRPSTYASTIKVLKDRNYVTVKSRV- 761
                   L+   T PPP  SEA L+ ++++  IG  +T    IK L DR Y T  + + 
Sbjct: 482 QFIPTTLTLDPGKTNPPPLLSEADLLSRMDKECIGTDATMHDHIKKLLDRFYATKDANMC 541

Query: 762 LSPEFRGRMVSAFLSHHFSEVMDYNFTADMETELDNVSGGLTEWKGLLRDYWTRFKSYCD 821
            +P   G  +         ++   +  A ME ++ +VS G      +L     + K+   
Sbjct: 542 FTPTNLGEALVMGYDDMGYKLWKPDLRAVMERDMKSVSEGNKSKAEVLDTSLQQMKT--- 598

Query: 822 STSNVHIHQVEKMLEKK--FGQYLFASLRDQK-------RVCPSCMEGTLIFKVSRFGAG 872
              +  +++V K+LE    F + L     D++       R C  C E  ++ K +R G  
Sbjct: 599 CFLDARLNKV-KLLEAMAIFFERLNRVGSDEQNGTGVVVRRCRLCQESDMVLKKNRDG-N 656

Query: 873 YFIGCDQHPRCKYI 886
           + +GC  +P+C+ +
Sbjct: 657 FMVGCRSYPQCRSV 670


>Medtr3g084800.2 | DNA topoisomerase I | HC | chr3:38297420-38308924
           | 20130731
          Length = 800

 Score = 77.0 bits (188), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 112/486 (23%), Positives = 195/486 (40%), Gaps = 86/486 (17%)

Query: 308 GAEVFILASDPDREGEAIAWHILEMLQQQGALHDNIS-VARVVFHEITEQSIKGALQAPR 366
           G    +L  D DREGE I + ++E      +   NI+ V R  F  +TE+ +  AL    
Sbjct: 46  GCRYLVLWLDCDREGENICFEVIE------STGFNINDVYRARFSSVTEKDVLNALDNLV 99

Query: 367 EIDVNLVHAYLARRALDYLIGFNISPLLWKKLPG--------CQSAGRVQSAALSLICDR 418
             + +   A  AR+ +D  +G   +        G          S G  Q+  L     R
Sbjct: 100 RPNRDEAMAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDARVISYGPCQTPTLGFCVQR 159

Query: 419 EMEIDKFKPQEYWTVEAQLRKKELISNRNLTFSGHLTCFDSKKLTQFSITSDTEARDIES 478
            ++I+ FKP+++W+++  + +           SG+    + ++   F    D     +  
Sbjct: 160 YLQINTFKPEKFWSLQPYIIQ-----------SGYEILLEWQRSKLF----DINVAMMFQ 204

Query: 479 KLKSTD--FKVISLKRNKVRRNPPTPYITSTLQQDAANKLHFTASHTMKLAQKLYEGVEL 536
           KL + D   +V ++      +  P    T  L + A++ L F     M+LA++LY     
Sbjct: 205 KLVADDGIVEVTNISEKPETKGRPVGLNTVNLLKVASSALGFGPQMAMQLAERLY----- 259

Query: 537 ADGVAEGLITYIRTD------GFHISDGAVANIRSLIIERYGQNFAARSPPKYFKKVKNA 590
                +G I+Y RT+       F       A   +     Y +   A      ++K ++ 
Sbjct: 260 ----TQGFISYPRTESTAYPPSFDFRSALSAQRNNPTWGNYVEGLLASG----YQKPRSG 311

Query: 591 QEA--HEAIRPTDIHKLPSMLAGVLDEESLKLYTLIWSR---TVS--CQMEPAIFEQVQL 643
            +   H  I P     + S    +L  ++ KLY  I      TVS  C+    I ++V+ 
Sbjct: 312 TDVGDHPPITP-----MKSASEDMLGNDAWKLYQYICQYFIGTVSPDCKY---IRKKVEF 363

Query: 644 DIGNADMSIMLRSASSKVEFPGYRAAFEDIDMEVVQDKHNDRSYRDQAFEVLNSIKTGDL 703
            +G        +   +K    G+ A    + +       ND+S        L S + G  
Sbjct: 364 QVGGESFHCTGQHVITK----GFTAIMPWLAI-------NDKS--------LPSFEEGQK 404

Query: 704 LHLVQAELNQHHTQPPPRYSEASLVKKLEELGIGRPSTYASTIKVLKDRNYVTVKS-RVL 762
           + L + EL +  T PP   +E+ L+  +E+ GIG  ++    I  + +RNYV V++ R L
Sbjct: 405 IKLSKVELYEGSTTPPDFLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKL 464

Query: 763 SPEFRG 768
           SP   G
Sbjct: 465 SPTTLG 470


>Medtr3g084800.1 | DNA topoisomerase I | HC | chr3:38297430-38308919
           | 20130731
          Length = 860

 Score = 77.0 bits (188), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 112/486 (23%), Positives = 195/486 (40%), Gaps = 86/486 (17%)

Query: 308 GAEVFILASDPDREGEAIAWHILEMLQQQGALHDNIS-VARVVFHEITEQSIKGALQAPR 366
           G    +L  D DREGE I + ++E      +   NI+ V R  F  +TE+ +  AL    
Sbjct: 106 GCRYLVLWLDCDREGENICFEVIE------STGFNINDVYRARFSSVTEKDVLNALDNLV 159

Query: 367 EIDVNLVHAYLARRALDYLIGFNISPLLWKKLPG--------CQSAGRVQSAALSLICDR 418
             + +   A  AR+ +D  +G   +        G          S G  Q+  L     R
Sbjct: 160 RPNRDEAMAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDARVISYGPCQTPTLGFCVQR 219

Query: 419 EMEIDKFKPQEYWTVEAQLRKKELISNRNLTFSGHLTCFDSKKLTQFSITSDTEARDIES 478
            ++I+ FKP+++W+++  + +           SG+    + ++   F    D     +  
Sbjct: 220 YLQINTFKPEKFWSLQPYIIQ-----------SGYEILLEWQRSKLF----DINVAMMFQ 264

Query: 479 KLKSTD--FKVISLKRNKVRRNPPTPYITSTLQQDAANKLHFTASHTMKLAQKLYEGVEL 536
           KL + D   +V ++      +  P    T  L + A++ L F     M+LA++LY     
Sbjct: 265 KLVADDGIVEVTNISEKPETKGRPVGLNTVNLLKVASSALGFGPQMAMQLAERLY----- 319

Query: 537 ADGVAEGLITYIRTD------GFHISDGAVANIRSLIIERYGQNFAARSPPKYFKKVKNA 590
                +G I+Y RT+       F       A   +     Y +   A      ++K ++ 
Sbjct: 320 ----TQGFISYPRTESTAYPPSFDFRSALSAQRNNPTWGNYVEGLLASG----YQKPRSG 371

Query: 591 QEA--HEAIRPTDIHKLPSMLAGVLDEESLKLYTLIWSR---TVS--CQMEPAIFEQVQL 643
            +   H  I P     + S    +L  ++ KLY  I      TVS  C+    I ++V+ 
Sbjct: 372 TDVGDHPPITP-----MKSASEDMLGNDAWKLYQYICQYFIGTVSPDCKY---IRKKVEF 423

Query: 644 DIGNADMSIMLRSASSKVEFPGYRAAFEDIDMEVVQDKHNDRSYRDQAFEVLNSIKTGDL 703
            +G        +   +K    G+ A    + +       ND+S        L S + G  
Sbjct: 424 QVGGESFHCTGQHVITK----GFTAIMPWLAI-------NDKS--------LPSFEEGQK 464

Query: 704 LHLVQAELNQHHTQPPPRYSEASLVKKLEELGIGRPSTYASTIKVLKDRNYVTVKS-RVL 762
           + L + EL +  T PP   +E+ L+  +E+ GIG  ++    I  + +RNYV V++ R L
Sbjct: 465 IKLSKVELYEGSTTPPDFLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKL 524

Query: 763 SPEFRG 768
           SP   G
Sbjct: 525 SPTTLG 530