Miyakogusa Predicted Gene

Lj5g3v0575450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0575450.1 tr|F2CX82|F2CX82_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,41.33,5e-16,FAMILY NOT
NAMED,NULL,CUFF.53334.1
         (405 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g102160.1 | transmembrane protein, putative | HC | chr8:42...   176   4e-44
Medtr3g110460.4 | transmembrane protein, putative | HC | chr3:51...   137   2e-32
Medtr3g110460.3 | transmembrane protein, putative | HC | chr3:51...   137   2e-32
Medtr3g110460.1 | transmembrane protein, putative | HC | chr3:51...   136   5e-32
Medtr3g110460.2 | transmembrane protein, putative | HC | chr3:51...   136   5e-32
Medtr5g013800.1 | transmembrane protein, putative | HC | chr5:45...    86   9e-17
Medtr5g013800.2 | transmembrane protein, putative | HC | chr5:45...    85   1e-16

>Medtr8g102160.1 | transmembrane protein, putative | HC |
           chr8:42960250-42971543 | 20130731
          Length = 1402

 Score =  176 bits (445), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 96/161 (59%), Positives = 110/161 (68%), Gaps = 1/161 (0%)

Query: 8   VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
           V +HL  N K+ +DAK   +V  S  EASNL VLKDSS+IHSNANLGV GQ +LNLS  G
Sbjct: 398 VKIHLMQNSKILIDAKEDLLVATSLLEASNLVVLKDSSIIHSNANLGVHGQGYLNLSGPG 457

Query: 68  NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
           +LIEAQHL+LSL  +  VG   VLRGPL+ +G+DN M  QLY + EN   EL HPPE CN
Sbjct: 458 DLIEAQHLVLSLFYSISVGPGSVLRGPLKANGDDN-MTPQLYCKQENCPAELLHPPEDCN 516

Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
            NSS   TLQICRVE   VE   TGS L F WIR + VE S
Sbjct: 517 VNSSLAFTLQICRVEDVSVEGTITGSVLHFHWIRSVKVEYS 557


>Medtr3g110460.4 | transmembrane protein, putative | HC |
           chr3:51645798-51637416 | 20130731
          Length = 817

 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/161 (50%), Positives = 99/161 (61%), Gaps = 1/161 (0%)

Query: 8   VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
           V + L  N KM +D      V  S  EASNL VL+ SS+IHSNANLGV GQ  LNLS  G
Sbjct: 432 VKMFLMWNSKMLIDGGEDISVATSLLEASNLIVLRGSSVIHSNANLGVHGQGLLNLSGPG 491

Query: 68  NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
           + IEAQ L+LSL  +  VG   VLRGPLE +  D+ +  +LY + ++   EL HPPE CN
Sbjct: 492 DWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTDD-VTPKLYCDKKDCPYELLHPPEDCN 550

Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
            NSS   TLQICRVE  +VE    GS + F   R +S+E S
Sbjct: 551 VNSSLSFTLQICRVEDVLVEGLIKGSVVHFHRARTISIESS 591


>Medtr3g110460.3 | transmembrane protein, putative | HC |
           chr3:51645798-51635106 | 20130731
          Length = 1070

 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/161 (50%), Positives = 99/161 (61%), Gaps = 1/161 (0%)

Query: 8   VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
           V + L  N KM +D      V  S  EASNL VL+ SS+IHSNANLGV GQ  LNLS  G
Sbjct: 432 VKMFLMWNSKMLIDGGEDISVATSLLEASNLIVLRGSSVIHSNANLGVHGQGLLNLSGPG 491

Query: 68  NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
           + IEAQ L+LSL  +  VG   VLRGPLE +  D+ +  +LY + ++   EL HPPE CN
Sbjct: 492 DWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTDD-VTPKLYCDKKDCPYELLHPPEDCN 550

Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
            NSS   TLQICRVE  +VE    GS + F   R +S+E S
Sbjct: 551 VNSSLSFTLQICRVEDVLVEGLIKGSVVHFHRARTISIESS 591


>Medtr3g110460.1 | transmembrane protein, putative | HC |
           chr3:51645866-51631348 | 20130731
          Length = 1447

 Score =  136 bits (342), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/161 (50%), Positives = 99/161 (61%), Gaps = 1/161 (0%)

Query: 8   VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
           V + L  N KM +D      V  S  EASNL VL+ SS+IHSNANLGV GQ  LNLS  G
Sbjct: 432 VKMFLMWNSKMLIDGGEDISVATSLLEASNLIVLRGSSVIHSNANLGVHGQGLLNLSGPG 491

Query: 68  NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
           + IEAQ L+LSL  +  VG   VLRGPLE +  D+ +  +LY + ++   EL HPPE CN
Sbjct: 492 DWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTDD-VTPKLYCDKKDCPYELLHPPEDCN 550

Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
            NSS   TLQICRVE  +VE    GS + F   R +S+E S
Sbjct: 551 VNSSLSFTLQICRVEDVLVEGLIKGSVVHFHRARTISIESS 591


>Medtr3g110460.2 | transmembrane protein, putative | HC |
           chr3:51645866-51631348 | 20130731
          Length = 1447

 Score =  136 bits (342), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/161 (50%), Positives = 99/161 (61%), Gaps = 1/161 (0%)

Query: 8   VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
           V + L  N KM +D      V  S  EASNL VL+ SS+IHSNANLGV GQ  LNLS  G
Sbjct: 432 VKMFLMWNSKMLIDGGEDISVATSLLEASNLIVLRGSSVIHSNANLGVHGQGLLNLSGPG 491

Query: 68  NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
           + IEAQ L+LSL  +  VG   VLRGPLE +  D+ +  +LY + ++   EL HPPE CN
Sbjct: 492 DWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTDD-VTPKLYCDKKDCPYELLHPPEDCN 550

Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
            NSS   TLQICRVE  +VE    GS + F   R +S+E S
Sbjct: 551 VNSSLSFTLQICRVEDVLVEGLIKGSVVHFHRARTISIESS 591


>Medtr5g013800.1 | transmembrane protein, putative | HC |
           chr5:4526714-4513931 | 20130731
          Length = 1437

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 2/142 (1%)

Query: 12  LWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELGNLIE 71
           +W N  M +D    ++V  S  E  NL VL+  S+I SN NLG+ GQ  L L+  G+ I+
Sbjct: 432 MW-NSTMEIDGGKSTVVSASVLEVRNLAVLRQRSVISSNTNLGLYGQGLLQLTGDGDAIK 490

Query: 72  AQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCNKNSS 131
            Q L LSL  N  VG   +L+ PL+       +   L  + +   ++L  PP+ C+ N +
Sbjct: 491 GQRLSLSLFYNVTVGPGSLLQAPLDDDASRGTVTKHL-CDTQRCPIDLITPPDDCHVNYT 549

Query: 132 WILTLQICRVEIAIVEVATTGS 153
              +LQICRVE  IV     GS
Sbjct: 550 LSFSLQICRVEDLIVNGIMKGS 571


>Medtr5g013800.2 | transmembrane protein, putative | HC |
           chr5:4524779-4513560 | 20130731
          Length = 1155

 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 74/142 (52%), Gaps = 2/142 (1%)

Query: 12  LWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELGNLIE 71
           +W N  M +D    ++V  S  E  NL VL+  S+I SN NLG+ GQ  L L+  G+ I+
Sbjct: 150 MW-NSTMEIDGGKSTVVSASVLEVRNLAVLRQRSVISSNTNLGLYGQGLLQLTGDGDAIK 208

Query: 72  AQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCNKNSS 131
            Q L LSL  N  VG   +L+ PL+       +   L  + +   ++L  PP+ C+ N +
Sbjct: 209 GQRLSLSLFYNVTVGPGSLLQAPLDDDASRGTVTKHL-CDTQRCPIDLITPPDDCHVNYT 267

Query: 132 WILTLQICRVEIAIVEVATTGS 153
              +LQICRVE  IV     GS
Sbjct: 268 LSFSLQICRVEDLIVNGIMKGS 289