Miyakogusa Predicted Gene

Lj5g3v0554340.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0554340.2 CUFF.53381.2
         (198 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g010010.1 | transmembrane protein, putative | HC | chr1:16...   238   2e-63
Medtr3g108690.1 | transmembrane protein, putative | HC | chr3:50...   237   7e-63
Medtr3g108690.2 | transmembrane protein, putative | HC | chr3:50...   236   1e-62

>Medtr1g010010.1 | transmembrane protein, putative | HC |
           chr1:1676321-1682368 | 20130731
          Length = 470

 Score =  238 bits (608), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 119/177 (67%), Positives = 138/177 (77%)

Query: 22  QRKGLISRIWNVIFRSNGNDLEKRLQHLSKAEASVMNKIANRSRFRSRILRNLILFSVLF 81
           +RKG +SRIWN +FRSN +D EKRLQ +SK E SVM ++ NRSR   R  R++ILFSVLF
Sbjct: 35  KRKGFVSRIWNFVFRSNKDDFEKRLQCISKEETSVMTRMNNRSRSWRRTSRHIILFSVLF 94

Query: 82  QVIAVVYATMTTRSVGMNWKMRAIRVLPMFLLPALSSAAYSFFVSFIRMCDRRDQKTLET 141
           ++IAV YA MTTRS  MNWKMRAIRVLPMFLLPALSSAAYS FVSFIRMCDRRDQK L+ 
Sbjct: 95  EIIAVSYAIMTTRSTDMNWKMRAIRVLPMFLLPALSSAAYSTFVSFIRMCDRRDQKILDR 154

Query: 142 LRAERQAKIDELKEKTNYYITQQLIQRYDTDPXXXXXXXXXXXXXXXXDSGLKVHVR 198
           LRAER+ KIDELKE+TNYY+TQQLIQ+YDTDP                DSGLK+++ 
Sbjct: 155 LRAERKEKIDELKERTNYYVTQQLIQKYDTDPAAKAAAATSLASKLGADSGLKLYME 211


>Medtr3g108690.1 | transmembrane protein, putative | HC |
           chr3:50206323-50201807 | 20130731
          Length = 455

 Score =  237 bits (604), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 122/196 (62%), Positives = 145/196 (73%), Gaps = 2/196 (1%)

Query: 2   GEEKETSXXXXXXXXXXXXXQRKGLISRIWNVIFRSNGNDLEKRLQHLSKAEASVMNKIA 61
           GE+KETS             +RKG ISRIWN IFR +G+D EKRL+H+SK EA+V+ ++ 
Sbjct: 10  GEKKETSPTATASGNVKK--KRKGFISRIWNGIFRLHGDDFEKRLKHISKEEATVIARVT 67

Query: 62  NRSRFRSRILRNLILFSVLFQVIAVVYATMTTRSVGMNWKMRAIRVLPMFLLPALSSAAY 121
            RSR R +  RNLI+FSV+F+VIAV YA MTTRSVG++WKMRAIRVLPMFLLPALSSA Y
Sbjct: 68  RRSRSRRQTSRNLIVFSVIFEVIAVGYAIMTTRSVGIDWKMRAIRVLPMFLLPALSSAVY 127

Query: 122 SFFVSFIRMCDRRDQKTLETLRAERQAKIDELKEKTNYYITQQLIQRYDTDPXXXXXXXX 181
           S F++F RMCDRRDQ  LE LRAERQAKIDELKEKTNYY TQQLIQRYD DP        
Sbjct: 128 SAFITFTRMCDRRDQNILEKLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAAT 187

Query: 182 XXXXXXXXDSGLKVHV 197
                   DSG+++++
Sbjct: 188 VLASKLGADSGMRLYM 203


>Medtr3g108690.2 | transmembrane protein, putative | HC |
           chr3:50206323-50201807 | 20130731
          Length = 320

 Score =  236 bits (601), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 122/196 (62%), Positives = 145/196 (73%), Gaps = 2/196 (1%)

Query: 2   GEEKETSXXXXXXXXXXXXXQRKGLISRIWNVIFRSNGNDLEKRLQHLSKAEASVMNKIA 61
           GE+KETS             +RKG ISRIWN IFR +G+D EKRL+H+SK EA+V+ ++ 
Sbjct: 10  GEKKETSPTATASGNVKK--KRKGFISRIWNGIFRLHGDDFEKRLKHISKEEATVIARVT 67

Query: 62  NRSRFRSRILRNLILFSVLFQVIAVVYATMTTRSVGMNWKMRAIRVLPMFLLPALSSAAY 121
            RSR R +  RNLI+FSV+F+VIAV YA MTTRSVG++WKMRAIRVLPMFLLPALSSA Y
Sbjct: 68  RRSRSRRQTSRNLIVFSVIFEVIAVGYAIMTTRSVGIDWKMRAIRVLPMFLLPALSSAVY 127

Query: 122 SFFVSFIRMCDRRDQKTLETLRAERQAKIDELKEKTNYYITQQLIQRYDTDPXXXXXXXX 181
           S F++F RMCDRRDQ  LE LRAERQAKIDELKEKTNYY TQQLIQRYD DP        
Sbjct: 128 SAFITFTRMCDRRDQNILEKLRAERQAKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAAT 187

Query: 182 XXXXXXXXDSGLKVHV 197
                   DSG+++++
Sbjct: 188 VLASKLGADSGMRLYM 203