Miyakogusa Predicted Gene

Lj5g3v0553270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0553270.1 Non Characterized Hit- tr|I1M9P5|I1M9P5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24090
PE,82.31,0,Endonuclease_5,Endonuclease V; seg,NULL,CUFF.53289.1
         (256 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g010130.1 | endonuclease V-like protein | HC | chr1:176117...   421   e-118
Medtr1g010130.3 | endonuclease V-like protein | HC | chr1:176117...   385   e-107
Medtr1g010130.4 | endonuclease V-like protein | HC | chr1:176117...   307   7e-84
Medtr1g010130.2 | endonuclease V-like protein | HC | chr1:176117...   307   7e-84

>Medtr1g010130.1 | endonuclease V-like protein | HC |
           chr1:1761173-1758257 | 20130731
          Length = 259

 Score =  421 bits (1082), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 202/242 (83%), Positives = 216/242 (89%), Gaps = 2/242 (0%)

Query: 17  NWITAQDTLREKLITEDSFPWKAPSTG--LRYVGGVDISFSKDDPSRACGTLVVLDFHTL 74
           NWIT QD L+EKLITED+F WK PS+   LRYVGGVDISFSK  PS ACGTLVVLDF TL
Sbjct: 18  NWITEQDNLKEKLITEDNFTWKLPSSSQELRYVGGVDISFSKHYPSLACGTLVVLDFQTL 77

Query: 75  QVVYEDFSLVTLEVPYVPGFLAFREAPVLLDILEKMKRSDNPFYPQLIMVDGNGILHPRG 134
           Q++Y+DFS VTL VPYVPGFLAFREAPVLLDILEKMKRS +PFYPQL+MVDGN ILHPRG
Sbjct: 78  QILYQDFSFVTLRVPYVPGFLAFREAPVLLDILEKMKRSGSPFYPQLLMVDGNRILHPRG 137

Query: 135 FGLACHIGVMANLPTIGIGKNLHHVDGLDQSTVRKLLGAKENSSKDFITLVGCSGHIWGA 194
           FGLACHIGV ANLPTIGIGKNLHHVDGL QS VR LL AKENSSK FITL GCSG  WGA
Sbjct: 138 FGLACHIGVKANLPTIGIGKNLHHVDGLHQSRVRNLLEAKENSSKHFITLTGCSGRTWGA 197

Query: 195 AMRATQGSIKPIFISIGHRISLQTAITIVQMTCKYRVPELIRQADIRSRDYIRKFEMNAK 254
           AM++TQGSIKPI+ISIGHRISLQTAI IVQMTCKYRVPE IRQADIRSRDYIRK+EMNA+
Sbjct: 198 AMKSTQGSIKPIYISIGHRISLQTAIAIVQMTCKYRVPEPIRQADIRSRDYIRKYEMNAE 257

Query: 255 VK 256
           +K
Sbjct: 258 LK 259


>Medtr1g010130.3 | endonuclease V-like protein | HC |
           chr1:1761173-1758909 | 20130731
          Length = 246

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/223 (83%), Positives = 197/223 (88%), Gaps = 2/223 (0%)

Query: 17  NWITAQDTLREKLITEDSFPWKAPSTG--LRYVGGVDISFSKDDPSRACGTLVVLDFHTL 74
           NWIT QD L+EKLITED+F WK PS+   LRYVGGVDISFSK  PS ACGTLVVLDF TL
Sbjct: 18  NWITEQDNLKEKLITEDNFTWKLPSSSQELRYVGGVDISFSKHYPSLACGTLVVLDFQTL 77

Query: 75  QVVYEDFSLVTLEVPYVPGFLAFREAPVLLDILEKMKRSDNPFYPQLIMVDGNGILHPRG 134
           Q++Y+DFS VTL VPYVPGFLAFREAPVLLDILEKMKRS +PFYPQL+MVDGN ILHPRG
Sbjct: 78  QILYQDFSFVTLRVPYVPGFLAFREAPVLLDILEKMKRSGSPFYPQLLMVDGNRILHPRG 137

Query: 135 FGLACHIGVMANLPTIGIGKNLHHVDGLDQSTVRKLLGAKENSSKDFITLVGCSGHIWGA 194
           FGLACHIGV ANLPTIGIGKNLHHVDGL QS VR LL AKENSSK FITL GCSG  WGA
Sbjct: 138 FGLACHIGVKANLPTIGIGKNLHHVDGLHQSRVRNLLEAKENSSKHFITLTGCSGRTWGA 197

Query: 195 AMRATQGSIKPIFISIGHRISLQTAITIVQMTCKYRVPELIRQ 237
           AM++TQGSIKPI+ISIGHRISLQTAI IVQMTCKYRVPE IRQ
Sbjct: 198 AMKSTQGSIKPIYISIGHRISLQTAIAIVQMTCKYRVPEPIRQ 240


>Medtr1g010130.4 | endonuclease V-like protein | HC |
           chr1:1761173-1758909 | 20130731
          Length = 200

 Score =  307 bits (786), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 148/180 (82%), Positives = 156/180 (86%), Gaps = 2/180 (1%)

Query: 17  NWITAQDTLREKLITEDSFPWKAPSTG--LRYVGGVDISFSKDDPSRACGTLVVLDFHTL 74
           NWIT QD L+EKLITED+F WK PS+   LRYVGGVDISFSK  PS ACGTLVVLDF TL
Sbjct: 18  NWITEQDNLKEKLITEDNFTWKLPSSSQELRYVGGVDISFSKHYPSLACGTLVVLDFQTL 77

Query: 75  QVVYEDFSLVTLEVPYVPGFLAFREAPVLLDILEKMKRSDNPFYPQLIMVDGNGILHPRG 134
           Q++Y+DFS VTL VPYVPGFLAFREAPVLLDILEKMKRS +PFYPQL+MVDGN ILHPRG
Sbjct: 78  QILYQDFSFVTLRVPYVPGFLAFREAPVLLDILEKMKRSGSPFYPQLLMVDGNRILHPRG 137

Query: 135 FGLACHIGVMANLPTIGIGKNLHHVDGLDQSTVRKLLGAKENSSKDFITLVGCSGHIWGA 194
           FGLACHIGV ANLPTIGIGKNLHHVDGL QS VR LL AKENSSK FITL GCSG  WGA
Sbjct: 138 FGLACHIGVKANLPTIGIGKNLHHVDGLHQSRVRNLLEAKENSSKHFITLTGCSGRTWGA 197


>Medtr1g010130.2 | endonuclease V-like protein | HC |
           chr1:1761173-1758257 | 20130731
          Length = 200

 Score =  307 bits (786), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 148/180 (82%), Positives = 156/180 (86%), Gaps = 2/180 (1%)

Query: 17  NWITAQDTLREKLITEDSFPWKAPSTG--LRYVGGVDISFSKDDPSRACGTLVVLDFHTL 74
           NWIT QD L+EKLITED+F WK PS+   LRYVGGVDISFSK  PS ACGTLVVLDF TL
Sbjct: 18  NWITEQDNLKEKLITEDNFTWKLPSSSQELRYVGGVDISFSKHYPSLACGTLVVLDFQTL 77

Query: 75  QVVYEDFSLVTLEVPYVPGFLAFREAPVLLDILEKMKRSDNPFYPQLIMVDGNGILHPRG 134
           Q++Y+DFS VTL VPYVPGFLAFREAPVLLDILEKMKRS +PFYPQL+MVDGN ILHPRG
Sbjct: 78  QILYQDFSFVTLRVPYVPGFLAFREAPVLLDILEKMKRSGSPFYPQLLMVDGNRILHPRG 137

Query: 135 FGLACHIGVMANLPTIGIGKNLHHVDGLDQSTVRKLLGAKENSSKDFITLVGCSGHIWGA 194
           FGLACHIGV ANLPTIGIGKNLHHVDGL QS VR LL AKENSSK FITL GCSG  WGA
Sbjct: 138 FGLACHIGVKANLPTIGIGKNLHHVDGLHQSRVRNLLEAKENSSKHFITLTGCSGRTWGA 197