Miyakogusa Predicted Gene

Lj5g3v0539960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0539960.1 Non Characterized Hit- tr|I3S4U9|I3S4U9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.45,0,ATP-synt_C,ATPase, F0/V0 complex, subunit C;
VACATPASE,ATPase, V0 complex, proteolipid subunit C; V-,CUFF.53288.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g090330.1 | vacuolar proton-ATPase subunit C proteolipid p...   285   2e-77
Medtr4g072050.1 | vacuolar H+-pumping ATPase 16 kDa proteolipid ...    74   1e-13
Medtr8g076150.1 | vacuolar H+-pumping ATPase 16 kDa proteolipid ...    73   1e-13
Medtr5g021690.1 | vacuolar H+-pumping ATPase 16 kDa proteolipid ...    72   2e-13
Medtr4g010220.1 | transmembrane protein, putative | LC | chr4:22...    47   8e-06

>Medtr7g090330.1 | vacuolar proton-ATPase subunit C proteolipid
           protein | HC | chr7:35528642-35532633 | 20130731
          Length = 182

 Score =  285 bits (729), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 154/181 (85%), Positives = 161/181 (88%)

Query: 1   MSGAATMATRSYVWSTALVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKA 60
           MS +A +A  S  W+ ALV+ISPYTFSAIGIAV+IGVSVLGAAWGIYITGSSLIGAAIKA
Sbjct: 1   MSSSAIIAAHSSSWAAALVRISPYTFSAIGIAVSIGVSVLGAAWGIYITGSSLIGAAIKA 60

Query: 61  PRITSKNLISVIFCEXXXXXXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVG 120
           PRITSKNLISVIFCE            LQTKLESVPKS IY+PESLRAGYAIFASG+IVG
Sbjct: 61  PRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPKSSIYEPESLRAGYAIFASGLIVG 120

Query: 121 FANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPS 180
           FANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPS
Sbjct: 121 FANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPS 180

Query: 181 K 181
           K
Sbjct: 181 K 181


>Medtr4g072050.1 | vacuolar H+-pumping ATPase 16 kDa proteolipid
           subunit 4 | HC | chr4:27331106-27328753 | 20130731
          Length = 164

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 6/157 (3%)

Query: 20  KISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXX 79
           + +P+ F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+       
Sbjct: 8   ETAPF-FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 66

Query: 80  XXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCAL 139
                   + T +   PK++ Y    L  GYA  +SG+  G A L  G+ +GI+G +   
Sbjct: 67  YGLIIAVIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 140 SDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
           ++AQ   LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 158


>Medtr8g076150.1 | vacuolar H+-pumping ATPase 16 kDa proteolipid
           subunit 4 | HC | chr8:32246083-32247718 | 20130731
          Length = 164

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 5/151 (3%)

Query: 26  FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXX 85
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+             
Sbjct: 13  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 72

Query: 86  XXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 145
             + T +   PK++ Y    L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ  
Sbjct: 73  VIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 127

Query: 146 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 128 KLFVGMILILIFAEALALYGLIVGIILSSRA 158


>Medtr5g021690.1 | vacuolar H+-pumping ATPase 16 kDa proteolipid
           subunit 4 | HC | chr5:8424558-8421677 | 20130731
          Length = 164

 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 85/157 (54%), Gaps = 6/157 (3%)

Query: 20  KISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXX 79
           + +P+ F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+       
Sbjct: 8   ETAPF-FGFLGAAAALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGI 66

Query: 80  XXXXXXXXLQTKLESVPKSQIYDPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCAL 139
                   + T +   PK++ Y    L  GYA  +SG+  G A L  G+ +G++G +   
Sbjct: 67  YGLIIAVIISTGIN--PKAKSY---YLFDGYAHLSSGLACGLAGLSAGMAIGVVGDAGVR 121

Query: 140 SDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
           ++AQ   LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 158


>Medtr4g010220.1 | transmembrane protein, putative | LC |
          chr4:2292566-2292895 | 20130731
          Length = 75

 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 5/57 (8%)

Query: 1  MSGAATMATRSYVWSTALVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAA 57
          MS +A +A  S     ALV++S YTF+AI IAV+I VS      GIYI G SLIGAA
Sbjct: 1  MSSSAIIAANSSSCVAALVRVSSYTFAAIDIAVSICVSA-----GIYIAGCSLIGAA 52