Miyakogusa Predicted Gene
- Lj5g3v0539710.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0539710.1 Non Characterized Hit- tr|C6TLC4|C6TLC4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,95.12,1e-38,helicase superfamily c-terminal domain,Helicase,
C-terminal; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NA,CUFF.53243.1
(91 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 165 1e-41
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 162 6e-41
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 162 6e-41
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 154 2e-38
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 87 4e-18
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 87 4e-18
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 87 4e-18
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 86 9e-18
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 85 1e-17
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 85 2e-17
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 83 5e-17
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 82 7e-17
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 79 7e-16
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 79 1e-15
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 79 1e-15
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 75 2e-14
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 75 2e-14
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 75 2e-14
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 75 2e-14
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 74 2e-14
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 74 2e-14
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 74 4e-14
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 74 4e-14
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 74 4e-14
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 74 4e-14
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 73 5e-14
Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like prote... 72 8e-14
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 72 1e-13
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 71 2e-13
Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 70 6e-13
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 70 6e-13
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 69 7e-13
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 69 7e-13
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 69 8e-13
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 69 1e-12
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 69 1e-12
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 69 1e-12
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 68 2e-12
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 68 2e-12
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 68 2e-12
Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC | s... 68 2e-12
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 68 2e-12
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 68 2e-12
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 65 2e-11
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 65 2e-11
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 64 4e-11
Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like prote... 62 9e-11
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 62 1e-10
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 1e-10
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 62 1e-10
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 1e-10
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 61 2e-10
Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like prote... 61 2e-10
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 61 3e-10
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 60 4e-10
Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like prote... 59 8e-10
Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like prote... 59 8e-10
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 58 2e-09
Medtr2g088350.1 | helicase family carboxy-terminal domain protei... 57 3e-09
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 57 6e-09
Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 56 8e-09
Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 55 2e-08
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 2e-08
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 54 5e-08
Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like prote... 52 2e-07
Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 52 2e-07
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 52 2e-07
Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 2e-07
Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like prote... 51 2e-07
Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 2e-07
Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 2e-07
Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like prote... 51 3e-07
Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC | chr... 50 3e-07
Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC | chr... 50 3e-07
Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC | chr... 50 3e-07
Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC | chr... 50 3e-07
Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC | chr... 50 3e-07
Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative ... 50 4e-07
Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative ... 50 4e-07
Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 50 4e-07
Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative ... 50 5e-07
Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative ... 50 5e-07
Medtr8g079452.1 | helicase family carboxy-terminal domain protei... 50 5e-07
Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like prote... 50 5e-07
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 50 6e-07
Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 |... 49 9e-07
Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like prote... 49 1e-06
Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like prote... 49 1e-06
Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 49 1e-06
Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 49 1e-06
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 48 2e-06
Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 47 3e-06
Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC | ... 47 5e-06
Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC | ... 47 5e-06
Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC | ... 47 5e-06
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 46 9e-06
Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 46 9e-06
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 165 bits (417), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/83 (95%), Positives = 82/83 (98%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
LKRYKGFKEG TRILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKGL
Sbjct: 328 LKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 387
Query: 69 AITFVSCATDVDVLNNVQSRFEV 91
AITFVSC++DVDVLNNVQSRFEV
Sbjct: 388 AITFVSCSSDVDVLNNVQSRFEV 410
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 162 bits (410), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 76/83 (91%), Positives = 82/83 (98%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
LKRY+GFKEG +RILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKGL
Sbjct: 328 LKRYRGFKEGHSRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 387
Query: 69 AITFVSCATDVDVLNNVQSRFEV 91
AITFVSC++DVDVLNNVQSRFE+
Sbjct: 388 AITFVSCSSDVDVLNNVQSRFEI 410
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 162 bits (410), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 76/83 (91%), Positives = 82/83 (98%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
LKRY+GFKEG +RILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKGL
Sbjct: 328 LKRYRGFKEGHSRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 387
Query: 69 AITFVSCATDVDVLNNVQSRFEV 91
AITFVSC++DVDVLNNVQSRFE+
Sbjct: 388 AITFVSCSSDVDVLNNVQSRFEI 410
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 154 bits (389), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/83 (90%), Positives = 78/83 (93%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
LKRYKGFKEG+ RILVATDLVGRGIDIERVNIVIN+DMPDSADTYLHRVGRAGRFGTKGL
Sbjct: 405 LKRYKGFKEGKQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGL 464
Query: 69 AITFVSCATDVDVLNNVQSRFEV 91
AITFVS A D +VLN VQSRFEV
Sbjct: 465 AITFVSSAGDSEVLNQVQSRFEV 487
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 323 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF 382
Query: 73 VSCATDVDVLNNVQSRFEV 91
V+ D +L ++Q + V
Sbjct: 383 VTLE-DARMLADIQKFYNV 400
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 323 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF 382
Query: 73 VSCATDVDVLNNVQSRFEV 91
V+ D +L+++Q + V
Sbjct: 383 VT-TDDERMLSDIQKFYNV 400
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 307 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF 366
Query: 73 VSCATDVDVLNNVQSRFEV 91
V+ D +L ++Q + V
Sbjct: 367 VTLE-DARMLADIQKFYNV 384
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 85.5 bits (210), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN+D+P + YLHR+GR+GRFG KG++I F
Sbjct: 323 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINF 382
Query: 73 VSCATDVDVLNNVQSRFEV 91
V+ D +L ++Q + V
Sbjct: 383 VT-GEDARMLADIQKFYNV 400
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 85.1 bits (209), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 340 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 399
Query: 73 VSCATDVDVLNNVQSRFEV 91
V+ D +L ++Q + V
Sbjct: 400 VT-KEDEGMLRDIQKFYNV 417
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +R+L+ TDL+ RGID+++V++VIN D+P + YLHR+GR+GRFG KG+AI F
Sbjct: 323 REFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINF 382
Query: 73 VSCATDVDVLNNVQSRFEV 91
V+ D +L ++Q + V
Sbjct: 383 VT-KEDEGMLRDIQKFYNV 400
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ G TR+L+ TD+ RG+D+++V++VIN+D+P++ + Y+HR+GR+GRFG KG+AI FV
Sbjct: 318 FRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVK 377
Query: 75 CATDVDVLNNVQSRF 89
+ D+ +L +++ +
Sbjct: 378 -SDDIKILRDIEQYY 391
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 82.4 bits (202), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ G+T +L+ATD+V RG+D + +N VIN+D PDSA Y+HR+GR+GR G G AITF +
Sbjct: 418 FRAGKTWVLIATDVVARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYT 477
Query: 75 CATDVDVLNNVQS 87
D+ L NV +
Sbjct: 478 -EEDIPFLRNVSN 489
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
+ F+ G R LV TDL RGIDI+ VN+VIN D P +++TYLHRVGR+GRFG GLA+
Sbjct: 429 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVN 488
Query: 72 FVS 74
V+
Sbjct: 489 LVT 491
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
+ F+ G R LV TDL RGIDI+ VN+VIN D P +++TYLHRVGR+GRFG GLA+
Sbjct: 422 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVN 481
Query: 72 FVS 74
++
Sbjct: 482 LIT 484
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
+ F+ G R LV TDL RGIDI+ VN+VIN D P +++TYLHRVGR+GRFG GLA+
Sbjct: 420 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVN 479
Query: 72 FVS 74
++
Sbjct: 480 LIT 482
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L+ FK G+ +L+ATD+ GRG+DI V++VIN+D+P Y+HRVGR R G GL
Sbjct: 336 LEALHDFKSGKVPVLLATDVAGRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGL 395
Query: 69 AITFVSCATDVDVLNNVQSRFE 90
A++ V+ DVD++ +++ E
Sbjct: 396 ALSLVT-QNDVDLIREIETLIE 416
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMP----------DSADTYLHRVGRAGR 62
K FK+G T++L++TD++ RG D ++VN+VIN+D+P + YLHRVGRAGR
Sbjct: 338 KEFKDGLTQVLISTDVLSRGFDQDQVNLVINYDLPLKYTRGQEPEPDCEVYLHRVGRAGR 397
Query: 63 FGTKGLAITFVSCATDVDVLNNVQSRFEV 91
FG KG + ++ V++ ++ F +
Sbjct: 398 FGRKGAVFNLICHESEQMVMSKIEEHFGI 426
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ FK G T ILVATD+ RG+DI V V+N D+P+ D Y+HR+GR GR G KGLA F
Sbjct: 448 RSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAF 507
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 74.7 bits (182), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ FK G T ILVATD+ RG+DI V V+N D+P+ D Y+HR+GR GR G KGLA F
Sbjct: 448 RSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAF 507
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 74.3 bits (181), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ G++ ILVATD+ RG+DI+ + +VIN+D P+ + Y+HR+GR GR G G+A TF S
Sbjct: 785 FRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFS 844
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 74.3 bits (181), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ G++ ILVATD+ RG+DI+ + +VIN+D P+ + Y+HR+GR GR G G+A TF S
Sbjct: 785 FRTGKSPILVATDVAARGLDIKDIRVVINYDFPNGVEDYVHRIGRTGRAGATGVAYTFFS 844
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 73.6 bits (179), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+GF+ + +LVATD+ GRGIDI V VIN+DMP + + Y HR+GR GR G G+A TF
Sbjct: 553 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 612
Query: 73 VSCATDVDVL 82
++ D DV
Sbjct: 613 LTL-QDTDVF 621
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 73.6 bits (179), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+GF+ + +LVATD+ GRGIDI V VIN+DMP + + Y HR+GR GR G G+A TF
Sbjct: 553 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 612
Query: 73 VSCATDVDVL 82
++ D DV
Sbjct: 613 LTL-QDTDVF 621
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 73.6 bits (179), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+GF+ + +LVATD+ GRGIDI V VIN+DMP + + Y HR+GR GR G G+A TF
Sbjct: 553 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 612
Query: 73 VSCATDVDVL 82
++ D DV
Sbjct: 613 LTL-QDTDVF 621
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 73.6 bits (179), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+GF+ + +LVATD+ GRGIDI V VIN+DMP + + Y HR+GR GR G G+A TF
Sbjct: 593 EGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTF 652
Query: 73 VSCATDVDVL 82
++ D DV
Sbjct: 653 LTL-QDTDVF 661
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 73.2 bits (178), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK G++ I+ ATD+ RG+D++ V VIN+D P S + Y+HR+GR GR G KG A TF +
Sbjct: 386 FKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFT 445
Query: 75 CA 76
A
Sbjct: 446 AA 447
>Medtr1g061970.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:27069344-27076281 | 20130731
Length = 491
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 14/91 (15%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMP--------------DSADTYLHRVG 58
K FK+G T++L++TD++ RG D ++VN+VIN+D+P + YLHRVG
Sbjct: 375 KEFKDGLTQVLISTDVLARGFDQQQVNLVINYDLPLKYAAEYTHGHEQEPDYEVYLHRVG 434
Query: 59 RAGRFGTKGLAITFVSCATDVDVLNNVQSRF 89
RAGRFG KG + D L+ ++ F
Sbjct: 435 RAGRFGRKGAVFNLICGERDEKTLSKIEKHF 465
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ FK G T ILVATD+ RG+DI RV V+N D+P+ D Y+HR+GR GR G GLA F
Sbjct: 456 RSFKTGNTPILVATDVAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAF 515
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK G++ I+ ATD+ RG+D++ + V+N+D P S + Y+HR+GR GR G KG A +F +
Sbjct: 492 FKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFFT 551
Query: 75 CA 76
A
Sbjct: 552 SA 553
>Medtr8g018370.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6241938-6240697 | 20130731
Length = 325
Score = 69.7 bits (169), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F+ G +IL+ TD + G+D++ V++VIN+D+P + YLHR+ GRFG KG+AI F
Sbjct: 234 RNFQSGSPQILITTDPLVYGLDVQEVSLVINYDLPTLPENYLHRICHKGRFGRKGVAINF 293
Query: 73 VSCATDVDVLNNVQ 86
V+ D +L+++Q
Sbjct: 294 VTL-DDFRMLSDIQ 306
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 40/62 (64%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ FK G T I+VATD+ RG+DI V VIN D+P D Y+HR+GR GR G GLA F
Sbjct: 445 RSFKRGLTPIMVATDVASRGLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGQSGLATAF 504
Query: 73 VS 74
S
Sbjct: 505 FS 506
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 69.3 bits (168), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
F+ G+T +LVATD+ RG+D++ + +V+N D P + Y+HR+GR GR G G+A TF
Sbjct: 454 FRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTF 511
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 69.3 bits (168), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
F+ G+T +LVATD+ RG+D++ + +V+N D P + Y+HR+GR GR G G+A TF
Sbjct: 454 FRSGRTPVLVATDVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTF 511
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 69.3 bits (168), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK G+ +LVATD+ +G+D + VIN+DMP + Y+HR+GR GR G G+A TF++
Sbjct: 443 FKTGKKDVLVATDIASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFIN 502
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK G+ +LVATD+ +G+D + VIN+DMP + Y+HR+GR GR G G+A TF++
Sbjct: 441 FKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFIN 500
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK +LVAT + RG+D++ + +VIN D+P+ + Y+HRVGR GR G KG AITF+S
Sbjct: 796 FKSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIS 855
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK G IL+ TD+ RG+DI V++VIN+D+P ++ Y+HRVGR R G G+AI+ V+
Sbjct: 296 FKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVN 355
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK G IL+ TD+ RG+DI V++VIN+D+P ++ Y+HRVGR R G G+AI+ V+
Sbjct: 296 FKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVN 355
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 68.2 bits (165), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FK G IL+ TD+ RG+DI V++VIN+D+P ++ Y+HRVGR R G G+AI+ V+
Sbjct: 296 FKSGDCNILLCTDVASRGLDIPAVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVN 355
>Medtr0427s0010.1 | DEAD-box RNA helicase family protein | HC |
scaffold0427:505-2043 | 20130731
Length = 227
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 14/94 (14%)
Query: 10 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDS--------------ADTYLH 55
K K FK+G T +L++ D++ RG D ++VN+VIN+D+P + + Y H
Sbjct: 106 KMVKEFKDGSTGVLISNDVLARGFDQDQVNLVINYDLPLNYTAEITCGGKPELDCEVYFH 165
Query: 56 RVGRAGRFGTKGLAITFVSCATDVDVLNNVQSRF 89
RVGRAGRFG KG + D +++ +++ F
Sbjct: 166 RVGRAGRFGRKGAVFNLICDERDEKLMSKIENHF 199
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 67.8 bits (164), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ T ILVATD+ RG+D+ V+ VIN D+P + + Y+HR+GR GR G+ G+A +F
Sbjct: 415 FRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFY- 473
Query: 75 CATDVDVL 82
TD D+
Sbjct: 474 --TDRDMF 479
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 67.8 bits (164), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ T ILVATD+ RG+D+ V+ VIN D+P + + Y+HR+GR GR G+ G+A +F
Sbjct: 384 FRSSSTSILVATDVASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFY- 442
Query: 75 CATDVDVL 82
TD D+
Sbjct: 443 --TDRDMF 448
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 43/57 (75%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 70
GF+ G +LVATD+ RG+DI V++VI++++P++++ ++HR GR GR G KG AI
Sbjct: 369 GFRNGHFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAI 425
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 6 HTGLKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGT 65
H K FK G +++ATD+ RG+DI V +VIN P + + Y+HR+GR GR G
Sbjct: 389 HERTKALSLFKNGSCPLMIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGK 448
Query: 66 KGLAITFVS 74
KG+A TF +
Sbjct: 449 KGVAHTFFT 457
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
K FK G+ R+LV +L RG+D+ ++V+N D+P + Y HR GR GR G G +T
Sbjct: 450 KKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTI 509
Query: 73 VSCATDVDVLNNVQSRFEV 91
++V V+ ++ + E+
Sbjct: 510 CE-ESEVFVVRKLKKQLEI 527
>Medtr1g022305.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:7041752-7035027 | 20130731
Length = 462
Score = 62.4 bits (150), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L+ FK G +IL+ DL RG+DI V+ VIN+D+PD Y+H VG+A G+
Sbjct: 227 LEALNAFKSGNCKILLCNDLASRGLDIPAVDTVINYDIPDDPRDYMHHVGQA---APTGV 283
Query: 69 AITFVS 74
AI+FVS
Sbjct: 284 AISFVS 289
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 42/57 (73%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 70
GF+ +LVATD+ RG+DI V++VI++++P++++ ++HR GR GR G KG AI
Sbjct: 378 GFRNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAI 434
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 62.0 bits (149), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
LK F+E ILVATD+ RG+DI V V+++ +P SA+ Y+HR GR R +G
Sbjct: 515 LKAMDRFRENDNGILVATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASAEGC 574
Query: 69 AITFVS 74
+I +S
Sbjct: 575 SIALIS 580
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 42/57 (73%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 70
GF+ +LVATD+ RG+DI V++VI++++P++++ ++HR GR GR G KG AI
Sbjct: 378 GFRNSYFNVLVATDVASRGLDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAI 434
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 61.6 bits (148), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F++ Q LVATD+ RG+DI V VIN P +Y+HRVGR R G G A+TFV+
Sbjct: 432 FRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVT 491
Query: 75 CATDVDVLNNVQSR 88
+D +L + R
Sbjct: 492 -DSDRSLLKAIAKR 504
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 61.2 bits (147), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F++ Q LVATD+ RG+DI V VIN P +Y+HRVGR R G G A+TFV+
Sbjct: 442 FRKQQVDFLVATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGRAGSAVTFVT 501
Query: 75 CATDVDVLNNVQSR 88
D +L + R
Sbjct: 502 -DNDRSLLKAIAKR 514
>Medtr4g059460.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:21899223-21892509 | 20130731
Length = 613
Score = 60.8 bits (146), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
++ FK ++ +L++TD+ RG+D V +I +D P A Y+HRVGR R G +G ++
Sbjct: 404 FQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLL 463
Query: 72 FVSCATDVDVLNNVQ 86
F+ +++D L +++
Sbjct: 464 FLQ-PSEIDYLQDLE 477
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 60.8 bits (146), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTK-GLAITFV 73
FK G +L+ATD+ RG+DI+ + V+N D+ D ++HR+GR GR G K G+A T +
Sbjct: 522 FKSGAYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLI 581
Query: 74 S 74
+
Sbjct: 582 T 582
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 60.1 bits (144), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+ F G+ ++VAT ++GRG+D+ V VI DMP+S + Y+H++GRA R G +G AI F
Sbjct: 430 QSFMVGEFPVVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIGRASRMGEEGQAIVF 489
Query: 73 VS 74
V+
Sbjct: 490 VN 491
>Medtr2g043360.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890320-18881902 | 20130731
Length = 492
Score = 59.3 bits (142), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
++ FK ++ +L++TD+ RG+D V +I +D P A Y+HRVGR R G +G ++
Sbjct: 283 FQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLL 342
Query: 72 FVSCATDVDVLNNVQ 86
F+ ++++ L +++
Sbjct: 343 FLQ-PSEIEYLQDLE 356
>Medtr2g043360.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:18890321-18881902 | 20130731
Length = 610
Score = 59.3 bits (142), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAIT 71
++ FK ++ +L++TD+ RG+D V +I +D P A Y+HRVGR R G +G ++
Sbjct: 401 FQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGERGESLL 460
Query: 72 FVSCATDVDVLNNVQ 86
F+ ++++ L +++
Sbjct: 461 FLQ-PSEIEYLQDLE 474
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 13 KGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
KGF+ G+ LVAT++ RG+DI V ++I + P + Y+HR GR GR G G+A+
Sbjct: 396 KGFRSGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 455
>Medtr2g088350.1 | helicase family carboxy-terminal domain protein |
LC | chr2:37222042-37223590 | 20130731
Length = 184
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 3 YLPHTGLKRY---KGFKEGQTRILV--ATDLVGRGIDIERVNIVINHDMPDSADTYLHRV 57
+LP LK+Y +K+ RI+V A DL GI+I+ VN+VIN D P +++TYLHRV
Sbjct: 115 FLPGGTLKQYFIRNRWKKLAYRIVVQFALDLSRGGINIQAVNVVINFDFPKNSETYLHRV 174
Query: 58 GRAGRF 63
G +GRF
Sbjct: 175 GWSGRF 180
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 56.6 bits (135), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F+ +T +L+ TD+ RGIDI ++ VIN D P ++HRVGR R G G A +F++
Sbjct: 307 FRSRKTMLLIVTDIAARGIDIPLLDNVINWDFPPKPKIFVHRVGRVARAGRTGTAYSFLT 366
>Medtr5g077690.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:33157541-33150855 | 20130731
Length = 497
Score = 55.8 bits (133), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 10 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLA 69
K F++G ++L+++D + RG+D+E V VIN+D+P T++HR GR R G G
Sbjct: 377 KTLNEFRKGVFQVLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGRTARAGQTGRC 436
Query: 70 ITFVS 74
T +S
Sbjct: 437 FTLMS 441
>Medtr1g102410.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:46249372-46245255 | 20130731
Length = 641
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 70
GF+ G+ LVAT++ RG+DI V ++I + P + Y+HR GR GR G G+A+
Sbjct: 354 GFRYGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV 410
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 10 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLA 69
K F IL+ TD+ RG+DI V+ ++ +D P + ++HRVGR R G +G A
Sbjct: 321 KALTSFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVHRVGRTARLGKQGHA 380
Query: 70 ITFV 73
+ F+
Sbjct: 381 VVFL 384
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 53.5 bits (127), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
FKE + ILV++D+ RG++ V +VI +P + Y+HR+GR GR G +G I ++
Sbjct: 591 FKESKQMILVSSDVTSRGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGKEGKGILLIA 650
>Medtr2g055850.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:23956977-23948909 | 20130731
Length = 557
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRF-GTKGLAITFV 73
F + + IL+ TD+ RG+DI V+ ++ D PD Y+HRVGR R G KG A+ F+
Sbjct: 383 FCKAEKGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFL 442
Query: 74 -------------------SCATDVDVLNNVQSRFE 90
A D L+NVQS+ E
Sbjct: 443 IPEELQFLRYLKAAKVPVKEYAFDDKKLSNVQSQLE 478
>Medtr1g083130.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:37010922-37003111 | 20130731
Length = 604
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 29 VGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVSCATDVDVLNNVQS 87
V RGID + V VIN +MP S Y+HR+GR GR + G +I+ VS ++D V+S
Sbjct: 373 VVRGIDFKNVYTVINFEMPRSVTGYVHRIGRTGRAYSSGTSISLVS-TDEMDTFEEVRS 430
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F++ + ILV +D+ RG+D V++V+ +P + Y+HR+GR GR G +G I ++
Sbjct: 409 FRKSKRLILVTSDVSARGVDYPDVSLVVQLGIPADKELYIHRLGRTGRIGKEGKGILLLA 468
>Medtr5g092560.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40427970-40421694 | 20130731
Length = 747
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIER-VNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 70
Y F E + +L +TD+ RG+D + V+ V+ D P++ +Y+HRVGR R+ + G ++
Sbjct: 365 YSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYNSVGKSV 424
Query: 71 TFV 73
F+
Sbjct: 425 LFL 427
>Medtr5g092560.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:40426461-40421694 | 20130731
Length = 536
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIER-VNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 70
Y F E + +L +TD+ RG+D + V+ V+ D P++ +Y+HRVGR R+ + G ++
Sbjct: 154 YSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYNSVGKSV 213
Query: 71 TFV 73
F+
Sbjct: 214 LFL 216
>Medtr8g079462.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:34021263-34013553 | 20130731
Length = 313
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 10 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLA 69
K F++G ++L+++D + R +D+E V VIN+D+P TY+HR GR R G
Sbjct: 193 KTLNEFRKGVFQVLLSSDALTREMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGRC 252
Query: 70 ITFVS 74
T +S
Sbjct: 253 FTLMS 257
>Medtr4g112320.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46124357-46130061 | 20130731
Length = 401
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR-FGTKGLAITFV 73
F + + IL+ TD+ RG+DI V+ ++ +D PD Y+HRVGR R KG A+ F+
Sbjct: 208 FCQAEKGILLCTDVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGKGNALLFL 267
>Medtr4g112340.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46109502-46117199 | 20130731
Length = 583
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR-FGTKGLAITFV 73
F + + IL+ TD+ RG+DI V+ ++ +D PD Y+HRVGR R KG A+ F+
Sbjct: 390 FCQAEKGILLCTDVAARGLDIPSVDWILQYDPPDEPKEYIHRVGRTARGEDGKGNALLFL 449
>Medtr5g069330.3 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 73
FK G+ IL+ ++ RG+DI V++VIN+++P + Y+HRVG G AI+FV
Sbjct: 295 AFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA---AISFV 351
Query: 74 S 74
+
Sbjct: 352 N 352
>Medtr5g069330.1 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 73
FK G+ IL+ ++ RG+DI V++VIN+++P + Y+HRVG G AI+FV
Sbjct: 291 AFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA---AISFV 347
Query: 74 S 74
+
Sbjct: 348 N 348
>Medtr5g069330.4 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382212-29375908 | 20130731
Length = 417
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 73
FK G+ IL+ ++ RG+DI V++VIN+++P + Y+HRVG G AI+FV
Sbjct: 291 AFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA---AISFV 347
Query: 74 S 74
+
Sbjct: 348 N 348
>Medtr5g069330.5 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 421
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 73
FK G+ IL+ ++ RG+DI V++VIN+++P + Y+HRVG G AI+FV
Sbjct: 295 AFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA---AISFV 351
Query: 74 S 74
+
Sbjct: 352 N 352
>Medtr5g069330.2 | DEAD-box ATP-dependent RNA helicase | LC |
chr5:29382234-29375756 | 20130731
Length = 417
Score = 50.4 bits (119), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 14 GFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFV 73
FK G+ IL+ ++ RG+DI V++VIN+++P + Y+HRVG G AI+FV
Sbjct: 291 AFKSGKFNILLCSEAARRGLDIPAVDMVINYNIPRDPNDYMHRVGWTGHVNA---AISFV 347
Query: 74 S 74
+
Sbjct: 348 N 348
>Medtr1g023070.1 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L K G+ IL+ +D V +G+DI V++VIN+++P S + Y++RVG +
Sbjct: 43 LGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT--VAHVNV 100
Query: 69 AITFVS 74
AI+FVS
Sbjct: 101 AISFVS 106
>Medtr1g023070.3 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 177
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L K G+ IL+ +D V +G+DI V++VIN+++P S + Y++RVG +
Sbjct: 43 LGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT--VAHVNV 100
Query: 69 AITFVS 74
AI+FVS
Sbjct: 101 AISFVS 106
>Medtr1g046570.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:17543999-17545772 | 20130731
Length = 398
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 16 KEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVG-RAGRFGTKGLAITFVS 74
+ G +L+ TD + G D+ +V++++N+D+P + + YL+R+G R+G+FG + +AI F++
Sbjct: 311 QSGSPHVLITTDPLVCGTDVHKVSLIVNYDLPAAPENYLYRIGRRSGQFG-RCVAINFMT 369
>Medtr1g023070.2 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L K G+ IL+ +D V +G+DI V++VIN+++P S + Y++RVG +
Sbjct: 43 LGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT--VAHVNV 100
Query: 69 AITFVS 74
AI+FVS
Sbjct: 101 AISFVS 106
>Medtr1g023070.4 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr1:7318006-7312768 | 20130731
Length = 206
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L K G+ IL+ +D V +G+DI V++VIN+++P S + Y++RVG +
Sbjct: 43 LGSLNALKSGECNILLCSDFVSKGLDIPAVDMVINYNIPLSPNDYIYRVGWT--VAHVNV 100
Query: 69 AITFVS 74
AI+FVS
Sbjct: 101 AISFVS 106
>Medtr8g079452.1 | helicase family carboxy-terminal domain protein
| HC | chr8:34005644-34004777 | 20130731
Length = 113
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F++G ++L+++D + R +D+E V VIN+D+P TY+HR GR R G T +S
Sbjct: 29 FRKGVFQVLLSSDALTRVMDVEGVRNVINYDVPKFIKTYVHRAGRTARAVQTGRCFTLMS 88
>Medtr1g009617.1 | DEAD-box ATP-dependent RNA helicase-like protein
| LC | chr1:1383737-1377649 | 20130731
Length = 400
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGL 68
L+ FK G+ IL+ +D + +G+DI V++VIN+++P Y++RVG +
Sbjct: 184 LRSLNAFKSGEYNILLCSDFLSKGLDIPAVDMVINYNIPRYPKDYIYRVGWTA--AHVNV 241
Query: 69 AITFVS 74
AI+FVS
Sbjct: 242 AISFVS 247
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F++ + ILV +D+ RG+D V++V+ +P Y+HR+GR GR G +G I ++
Sbjct: 405 FRKSKRLILVTSDVSARGVDYPDVSLVVQVGLPADKQQYIHRLGRTGRKGKEGKGILLLA 464
>Medtr8g018350.1 | eukaryotic translation initiation factor 4A1 | HC
| chr8:6234340-6233617 | 20130731
Length = 176
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 37/56 (66%)
Query: 9 LKRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFG 64
++R F+ G ++L+ TD + G D+ + ++V+N+D+P + YL+ +GR+G+F
Sbjct: 87 IEREFLFESGSPQVLITTDPLVCGTDLHKASLVVNYDLPTVPENYLNHIGRSGKFA 142
>Medtr4g068990.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25903244-25908935 | 20130731
Length = 752
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIER-VNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 70
Y F E + IL ATD+ RG+D R V+ V+ D P++ +Y+HRVGR R+ + G ++
Sbjct: 365 YSEFCE-KCSILFATDVAARGLDFNRAVDWVVQVDCPENVASYIHRVGRTARYKSLGKSV 423
Query: 71 TFV 73
++
Sbjct: 424 LYL 426
>Medtr4g068990.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:25904178-25909316 | 20130731
Length = 535
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 12 YKGFKEGQTRILVATDLVGRGIDIER-VNIVINHDMPDSADTYLHRVGRAGRFGTKGLAI 70
Y F E + IL ATD+ RG+D R V+ V+ D P++ +Y+HRVGR R+ + G ++
Sbjct: 154 YSEFCE-KCSILFATDVAARGLDFNRAVDWVVQVDCPENVASYIHRVGRTARYKSLGKSV 212
Query: 71 TFV 73
++
Sbjct: 213 LYL 215
>Medtr8g042690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr8:16475815-16482952 | 20130731
Length = 462
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%)
Query: 10 KRYKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLA 69
K Y F + IL+ T++ G++I V++++ +D P + Y+H+VGR R KG A
Sbjct: 306 KIYYSFSNAEEMILLCTNIAAFGLNIPDVDLIVQYDPPIDPEEYIHKVGRTARGTRKGNA 365
Query: 70 ITFV 73
+ F+
Sbjct: 366 LLFL 369
>Medtr4g131750.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:54963018-54968467 | 20130731
Length = 480
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 16 KEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR 62
++G +LVATD+ RG+D + + N+D+P +A YLHR GR R
Sbjct: 396 RKGGGYLLVATDVAARGVDFPEMTHIYNYDLPKTAIDYLHRAGRTCR 442
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 15 FKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
F++ + ILV +D+ RG+D V +V+ +P Y+HR+GR GR G +G I ++
Sbjct: 504 FRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPADKQQYIHRLGRTGRKGKEGQGILLLA 563
>Medtr8g062720.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:26237354-26229767 | 20130731
Length = 594
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%)
Query: 22 ILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITF 72
+LV TD RG+DI V+ VI D SA +LHR+GR R G GL +
Sbjct: 487 VLVCTDAAARGVDIPNVSHVIQADFATSAVDFLHRIGRTARAGQIGLVTSM 537
>Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043455 | 20130731
Length = 876
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 4 LPHTGLKR-YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR 62
LP L+R +K F E ++VAT G GID V +I++ P S + Y GRAGR
Sbjct: 540 LPKLHLRRTHKEFHENTLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGR 599
Query: 63 FGTKGLAITFVSCATDVDVLNNVQS 87
G I + + A +L + +S
Sbjct: 600 DGKLADCILYANLARKPSLLPSRRS 624
>Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043472 | 20130731
Length = 768
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 4 LPHTGLKR-YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR 62
LP L+R +K F E ++VAT G GID V +I++ P S + Y GRAGR
Sbjct: 540 LPKLHLRRTHKEFHENTLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGR 599
Query: 63 FGTKGLAITFVSCATDVDVLNNVQS 87
G I + + A +L + +S
Sbjct: 600 DGKLADCILYANLARKPSLLPSRRS 624
>Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050187-37043472 | 20130731
Length = 768
Score = 46.6 bits (109), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 4 LPHTGLKR-YKGFKEGQTRILVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGR 62
LP L+R +K F E ++VAT G GID V +I++ P S + Y GRAGR
Sbjct: 540 LPKLHLRRTHKEFHENTLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGR 599
Query: 63 FGTKGLAITFVSCATDVDVLNNVQS 87
G I + + A +L + +S
Sbjct: 600 DGKLADCILYANLARKPSLLPSRRS 624
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 23 LVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
LV TDL RG+D++ V+ VI D P ++ YLHR GR R G KG + V+
Sbjct: 423 LVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLVT 473
>Medtr6g039840.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348848-14341230 | 20130731
Length = 508
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 23 LVATDLVGRGIDIERVNIVINHDMPDSADTYLHRVGRAGRFGTKGLAITFVS 74
LV TDL RG+D++ V+ VI D P ++ YLHR GR R G KG + V+
Sbjct: 247 LVCTDLAARGLDLD-VDHVIMFDFPLNSIDYLHRTGRTARMGAKGKITSLVT 297