Miyakogusa Predicted Gene
- Lj5g3v0539700.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0539700.2 Non Characterized Hit- tr|K3XI13|K3XI13_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si001080,93.2,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2,
ATP-binding domain; SUBFAMILY NOT NAMED,NULL; FAMILY ,CUFF.53242.2
(104 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 201 1e-52
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 201 2e-52
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 201 2e-52
Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like prote... 200 2e-52
Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like prote... 200 2e-52
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 199 5e-52
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 77 2e-15
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 76 8e-15
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 76 9e-15
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 75 1e-14
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 75 2e-14
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 74 2e-14
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 71 2e-13
Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 71 3e-13
Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like prote... 71 3e-13
Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC | sc... 69 7e-13
Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 65 9e-12
Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like prote... 64 3e-11
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 63 8e-11
Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family pro... 63 8e-11
Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like prote... 62 9e-11
Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like prote... 62 9e-11
Medtr8g007360.1 | DEAD-box ATP-dependent RNA helicase, putative ... 62 9e-11
Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family pro... 62 1e-10
Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 59 9e-10
Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like prote... 59 1e-09
Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 58 2e-09
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 58 2e-09
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 58 2e-09
Medtr4g077370.1 | DEAD-box helicase family protein | LC | chr4:2... 58 2e-09
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 58 2e-09
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 57 3e-09
Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 57 3e-09
Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like prote... 57 4e-09
Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like prote... 57 4e-09
Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 56 8e-09
Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 1e-08
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 55 1e-08
Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like prote... 54 2e-08
Medtr8g032230.1 | DEAD-box helicase family protein | HC | chr8:1... 54 3e-08
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 54 3e-08
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 54 3e-08
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 54 3e-08
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 54 3e-08
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 54 4e-08
Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 53 5e-08
Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 52 9e-08
Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 52 2e-07
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 50 5e-07
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 50 7e-07
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 201 bits (511), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/104 (92%), Positives = 100/104 (96%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
MDV+CQAKSGMGKTAVFVLSTLQQIDPV GQVSAL+LCHTRELAYQICHEFERFS +L D
Sbjct: 84 MDVLCQAKSGMGKTAVFVLSTLQQIDPVPGQVSALILCHTRELAYQICHEFERFSTYLAD 143
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
LKVAV YGGVNIKVHKDLLKNECPHIVVGTPGRILALARDK+LS
Sbjct: 144 LKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKDLS 187
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/104 (93%), Positives = 99/104 (95%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
MDVICQAKSGMGKTAVFVLSTLQQIDPV GQVSALVLCHTRELAYQICHEFERFS +LPD
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLPD 143
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
LKVAV YGGVNIKVHKDLLKNECP IVVGTPGRILALAR+K LS
Sbjct: 144 LKVAVFYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNLS 187
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 201 bits (510), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/104 (93%), Positives = 99/104 (95%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
MDVICQAKSGMGKTAVFVLSTLQQIDPV GQVSALVLCHTRELAYQICHEFERFS +LPD
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLPD 143
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
LKVAV YGGVNIKVHKDLLKNECP IVVGTPGRILALAR+K LS
Sbjct: 144 LKVAVFYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNLS 187
>Medtr3g107420.4 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561636 | 20130731
Length = 314
Score = 200 bits (508), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/104 (93%), Positives = 99/104 (95%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
MDVICQAKSGMGKTAVFVLSTLQQIDPV GQVSALVLCHTRELAYQICHEFERFS +LPD
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLPD 143
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
LKVAV YGGVNIKVHKDLLKNECP IVVGTPGRILALAR+K LS
Sbjct: 144 LKVAVFYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNLS 187
>Medtr3g107420.3 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49558567 | 20130731
Length = 314
Score = 200 bits (508), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/104 (93%), Positives = 99/104 (95%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
MDVICQAKSGMGKTAVFVLSTLQQIDPV GQVSALVLCHTRELAYQICHEFERFS +LPD
Sbjct: 84 MDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLPD 143
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
LKVAV YGGVNIKVHKDLLKNECP IVVGTPGRILALAR+K LS
Sbjct: 144 LKVAVFYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNLS 187
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 199 bits (505), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 98/103 (95%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
MDVICQAKSGMGKTAVFVLSTLQQIDPV GQV+ALVLCHTRELAYQICHE ERFS +LPD
Sbjct: 161 MDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVAALVLCHTRELAYQICHEVERFSTYLPD 220
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KVAV YGGVNIKVHKDLLKNECPHIVVGTPGRILAL RDK+L
Sbjct: 221 IKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALTRDKDL 263
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 77.4 bits (189), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D + ALVL TRELA QI E+ + L D
Sbjct: 78 LDVIQQAQSGTGKTATFCSGILQQLDYSVTECQALVLAPTRELAQQI----EKVMRALGD 133
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L + H+VVGTPGR+ + R + L
Sbjct: 134 YLGVKVHACVGGTSVREDQRILSSGV-HVVVGTPGRVFDMLRRQSL 178
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 78 LDVIQQAQSGTGKTATFCSGVLQQLDYNVTQCQALVLAPTRELAQQI----EKVMRALGD 133
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L H+VVGTPGR+ + R + L
Sbjct: 134 YLGVKVHACVGGTSVREDQRILSTGV-HVVVGTPGRVFDMLRRQSL 178
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 75.9 bits (185), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 95 LDVIQQAQSGTGKTATFCSGVLQQLDYNVTQCQALVLAPTRELAQQI----EKVMRALGD 150
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L H+VVGTPGR+ + R + L
Sbjct: 151 YLGVKVHACVGGTSVREDQRILSTGV-HVVVGTPGRVFDMLRRQSL 195
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 75.5 bits (184), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 78 LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQI----EKVMRALGD 133
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L+ H VVGTPGR+ + R + L
Sbjct: 134 FLGVKVHACVGGTSVREDQRILQAGV-HTVVGTPGRVFDMLRRQSL 178
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 78 LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQI----EKVMRALGD 133
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L+ H+VVGTPGR+ + R + L
Sbjct: 134 YLGVKVHACVGGTSVREDQRILQTGV-HVVVGTPGRVFDMLRRQSL 178
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
+DVI QA+SG GKTA F LQQ+D Q ALVL TRELA QI E+ + L D
Sbjct: 62 LDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQI----EKVMRALGD 117
Query: 61 ---LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
+KV C GG +++ + +L+ H+VVGTPGR+ + R + L
Sbjct: 118 YLGVKVHACVGGTSVREDQRILQTGV-HVVVGTPGRVFDMLRRQSL 162
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 71.2 bits (173), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
D++ +AK+G GKTA F + L++ID + ++L TRELA Q + KHL +
Sbjct: 188 DILARAKNGTGKTAAFSIPALEKIDQDKNVIQVVILVPTRELALQTSQVCKELGKHL-QI 246
Query: 62 KVAVCYGGVNIKVHKDLLKNECP-HIVVGTPGRILALAR 99
+V V GG ++K D+++ P H++VGTPGRIL LA+
Sbjct: 247 QVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAK 283
>Medtr7g076830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:29001486-28993339 | 20130731
Length = 516
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
D++ +AK+G GKTA F + L++ID + ++L TRELA Q + KHL +
Sbjct: 181 DILARAKNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQVCKELGKHL-QI 239
Query: 62 KVAVCYGGVNIKVHKDLLKNECP-HIVVGTPGRILALAR 99
+V V GG ++K D+++ P H++VGTPGRIL LA+
Sbjct: 240 QVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAK 276
>Medtr7g076800.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28977519-28970435 | 20130731
Length = 514
Score = 70.9 bits (172), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
D++ +AK+G GKTA F + L++ID + ++L TRELA Q + KHL +
Sbjct: 179 DILARAKNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQVCKELGKHL-QI 237
Query: 62 KVAVCYGGVNIKVHKDLLKNECP-HIVVGTPGRILALAR 99
+V V GG ++K D+++ P H++VGTPGRIL LA+
Sbjct: 238 QVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAK 274
>Medtr0915s0010.1 | DEAD-box ATP-dependent RNA helicase | HC |
scaffold0915:3555-1057 | 20130731
Length = 282
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
D++ +AK+G GKTA F + L++ID + ++L TRELA Q + KHL +
Sbjct: 27 DILARAKNGTGKTAAFSIPALEKIDQDNNIIQVVILVPTRELALQTSQVCKELGKHL-QI 85
Query: 62 KVAVCYGGVNIKVHKDLLKNECP-HIVVGTPGRILALAR 99
+V V GG ++K D+++ P H++VGTPGRIL LA+
Sbjct: 86 QVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLAK 122
>Medtr2g066050.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:27664451-27658107 | 20130731
Length = 513
Score = 65.5 bits (158), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 3 VICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDLK 62
VI ++G GKTA F L LQ++ V ALV+ TRELA+Q+ +F L L+
Sbjct: 92 VIGIDQTGSGKTAAFALPILQRLAEHTFGVFALVVTPTRELAFQLAEQFRALGSSL-RLR 150
Query: 63 VAVCYGGVN-IKVHKDLLKNECPHIVVGTPGRILALARD 100
+AV GG++ ++ K+L+ PH+V+ TPGRI L +D
Sbjct: 151 IAVVVGGMDMLRQTKELVAR--PHLVIATPGRIKVLLKD 187
>Medtr7g056830.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:20527189-20518464 | 20130731
Length = 438
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI--DPVAGQVSALVLCHTRELAYQICHEFERFSKHLP 59
D+I AK+G GKT F L L + P A V+ TRELA QI +FE +
Sbjct: 48 DLIGLAKTGSGKTGAFALPILHALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEI- 106
Query: 60 DLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
+K AV GG+++ V + + + PHI+VGTPGR+L
Sbjct: 107 GVKCAVLVGGIDM-VQQSVKIAKLPHIIVGTPGRVL 141
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI------DPVAGQVSALVL--CHTRELAYQICHEFER 53
DV+ +AK+G GKT F+L +++ + DP Q LVL C TRELA Q E +
Sbjct: 144 DVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDPGQSQTPILVLVVCPTRELARQAAAEATK 203
Query: 54 FSKHLPDLKVAVCYGGVNI-KVHKDLLKNECPHIVVGTPGRI 94
K+ P + V GG I K + KN C I+V TPGR+
Sbjct: 204 LLKYHPTIGAQVVIGGTKIVSEQKRIQKNPC-QILVATPGRL 244
>Medtr8g097000.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:40729630-40725252 | 20130731
Length = 756
Score = 62.8 bits (151), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPV--------AGQVSALVLCHTRELAYQICHEFER 53
DV+ +AK+G GKTA F+L ++ + A + L+LC TRELA QI E +
Sbjct: 326 DVMVKAKTGTGKTAAFLLPAIETVLKAMSSKTSHRAPPIYVLILCPTRELASQIAAEAKV 385
Query: 54 FSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
K+ + V GGV KV + L+++ ++V TPGR+L
Sbjct: 386 LLKYHDGVGVQTLVGGVRFKVDQKRLESDPCQMLVATPGRLL 427
>Medtr6g082080.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641167-30650711 | 20130731
Length = 438
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI--DPVAGQVSALVLCHTRELAYQICHEFERFSKHLP 59
D+I A++G GKT F L L + P A V+ TRELA QI +FE +
Sbjct: 48 DLIGLAETGSGKTGAFALPILHALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEI- 106
Query: 60 DLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
+K AV GG+++ V + + + PHI+VGTPGR+L
Sbjct: 107 GVKCAVLVGGIDM-VQQSVKIAKLPHIIVGTPGRVL 141
>Medtr6g082080.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:30641166-30650890 | 20130731
Length = 438
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI--DPVAGQVSALVLCHTRELAYQICHEFERFSKHLP 59
D+I A++G GKT F L L + P A V+ TRELA QI +FE +
Sbjct: 48 DLIGLAETGSGKTGAFALPILHALLEAPRPNHFFACVMSPTRELAIQISEQFEALGSEI- 106
Query: 60 DLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
+K AV GG+++ V + + + PHI+VGTPGR+L
Sbjct: 107 GVKCAVLVGGIDM-VQQSVKIAKLPHIIVGTPGRVL 141
>Medtr8g007360.1 | DEAD-box ATP-dependent RNA helicase, putative |
LC | chr8:1486926-1487156 | 20130731
Length = 76
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 46 QICHEFERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
ICHE ERF+ +L D+KV V YG +NIKVHKDLL +IVVGTP RI
Sbjct: 10 HICHEVERFNTYLLDIKVIVFYGSLNIKVHKDLLN--INNIVVGTPRRIF 57
>Medtr8g027780.2 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10126329 | 20130731
Length = 458
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI------DPVAGQVSALVL--CHTRELAYQICHEFER 53
DV+ +AK+G GKT F+L +++ + DP Q LVL C TRELA Q E +
Sbjct: 144 DVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDPGQSQTPILVLVVCPTRELARQAAAEATK 203
Query: 54 FSKHLPDLKVAVCYGGVNI-KVHKDLLKNECPHIVVGTPGRI 94
K+ P + V GG I K + KN C I+V TPGR+
Sbjct: 204 LLKYHPTIGAQVVIGGTKIVSEQKRIQKNPC-QILVATPGRL 244
>Medtr2g063080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:26668487-26670676 | 20130731
Length = 552
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQ----------------VSALVLCHTRELAY 45
DVI Q+ +G GKT ++L L I P+ G+ V A+++ +REL
Sbjct: 147 DVIIQSYTGSGKTLAYLLPILSVIGPLKGENNEGGGDGGESGKKLGVEAVIVAPSRELGM 206
Query: 46 QICHEFERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
QI EFE+ V GG N ++ LK P IVVGTPGRI L+ +L
Sbjct: 207 QIVREFEKILGMENRKVVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSASGKL 264
>Medtr3g071620.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:32167186-32161537 | 20130731
Length = 589
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI-----DPVAGQVSALVLCHTRELAYQICHEFERFSK 56
DV A +G GKT FV+ ++ + +P QV +++ TRELA QI H + F
Sbjct: 54 DVAVDAATGSGKTLAFVIPLVEILRRNASNPKPHQVLGVIISPTRELASQIYHVAQPFIS 113
Query: 57 HLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRI 94
L ++K + GGV +K ++ E ++++GTPGR+
Sbjct: 114 TLANVKSMLLVGGVEVKADIKKIEEEGANVLIGTPGRL 151
>Medtr4g079320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:30630772-30640503 | 20130731
Length = 787
Score = 58.2 bits (139), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 60/98 (61%), Gaps = 6/98 (6%)
Query: 1 MDVICQAKSGMGKTAVFVLSTLQQIDP--VAGQVSALVLCHTRELAYQICHEFERFSKHL 58
+DV+ A++G GKTA F++ L +++ G V L+L TR+LA Q +F + H
Sbjct: 56 IDVVAMARTGSGKTAAFLVPMLHRLNQHVPQGGVRGLILSPTRDLAQQTL-KFTKELGHF 114
Query: 59 PDLKVAVCYGGVNIKVH-KDLLKNECPHIVVGTPGRIL 95
DL+V++ GG +++ ++L +N P I++ TPGR++
Sbjct: 115 TDLRVSLLVGGDSMESQFEELAQN--PDIIIATPGRLM 150
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI---DPV--AGQVSALVLCHTRELAYQICHEFERFSK 56
D++ A++G GKTA F + +Q P+ ALVL TRELA QI E + FS+
Sbjct: 155 DLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSR 214
Query: 57 HLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
L K A+ GG NI+ + L+ I V TPGR +
Sbjct: 215 SLESFKTAIVVGGTNIEKQRSELRAGV-EIAVATPGRFI 252
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI---DPV--AGQVSALVLCHTRELAYQICHEFERFSK 56
D++ A++G GKTA F + +Q P+ ALVL TRELA QI E + FS+
Sbjct: 124 DLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSR 183
Query: 57 HLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
L K A+ GG NI+ + L+ I V TPGR +
Sbjct: 184 SLESFKTAIVVGGTNIEKQRSELRAGV-EIAVATPGRFI 221
>Medtr4g077370.1 | DEAD-box helicase family protein | LC |
chr4:29630577-29632466 | 20130731
Length = 446
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 3 VICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDLK 62
VI K+G GKTA F L LQ++ V ALVL TRELA Q+ H+F L L
Sbjct: 289 VIGIDKTGSGKTAAFALPILQRLGETPFGVFALVLTPTRELAVQLAHQFWILGSSL-RLI 347
Query: 63 VAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDK 101
+ V GG++ ++ L P++V+ TP R+ L +D
Sbjct: 348 LTVVVGGLDKRIQAKQLVAR-PNLVIATPERLKILLQDN 385
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 57.8 bits (138), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
DVI QA+SG GKT++ L+ Q +D +V AL++ TRELA Q + ++
Sbjct: 72 DVIAQAQSGTGKTSMIALTVCQVVDTSVREVQALIVSPTRELASQTEKVILTIGDFI-NI 130
Query: 62 KVAVCYGGVNIKVHKDLLKNE-CPHIVVGTPGRILALARDKEL 103
+ C GG + V +D+ K E H+V GTPGR+ + + + L
Sbjct: 131 QAHACIGGKS--VGEDIRKLEHGVHVVSGTPGRVCDMIKRRTL 171
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI--------DPVAGQVSALVLCHTRELAYQICHEFER 53
DV+ +AK+G GKT F+L +++ + D + LV+C TRELA Q E +
Sbjct: 239 DVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDRDQRRPPIFVLVICPTRELACQAAAEATK 298
Query: 54 FSKHLPDLKVAVCYGGVNIKV-HKDLLKNECPHIVVGTPGRI 94
K+ P + V V GG + + K + N C I+V TPGR+
Sbjct: 299 LLKYHPTIGVQVVIGGTRLALEQKRMQANPC-QILVATPGRL 339
>Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857813-27867050 | 20130731
Length = 456
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI---DPV--AGQVSALVLCHTRELAYQICHEFERFSK 56
D++ A++G GKTA F + +Q P+ ALVL TRELA QI E + FS+
Sbjct: 155 DLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPLALVLAPTRELAQQIEKEVQAFSR 214
Query: 57 HLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
L K A+ GG NI+ + L+ I V TPGR +
Sbjct: 215 SLESFKTAIVVGGTNIEKQRSELRAGV-EIAVATPGRFI 252
>Medtr3g449250.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688391-16681206 | 20130731
Length = 558
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI-----------DPVAGQVSALVLCHTRELAYQICHE 50
D+I +A++G GKT F + L +I DP+A LVL TRELA Q+ E
Sbjct: 128 DMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPLA-----LVLAPTRELARQVEKE 182
Query: 51 FERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
F+ + P+L++ YGG+ I+ L + IVVGTPGR++ L + L
Sbjct: 183 FKDAA---PNLEIISLYGGMPIQQQISKLGSGV-DIVVGTPGRVIDLLKRGSL 231
>Medtr3g449250.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:16688386-16681429 | 20130731
Length = 579
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 20/113 (17%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI-----------DPVAGQVSALVLCHTRELAYQICHE 50
D+I +A++G GKT F + L +I DP+A LVL TRELA Q+ E
Sbjct: 128 DMIGRARTGTGKTLAFGIPILDKIIKFNAKNGKRRDPLA-----LVLAPTRELARQVEKE 182
Query: 51 FERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKEL 103
F+ + P+L++ YGG+ I+ L + IVVGTPGR++ L + L
Sbjct: 183 FKDAA---PNLEIISLYGGMPIQQQISKLGSGV-DIVVGTPGRVIDLLKRGSL 231
>Medtr2g041140.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:18030127-18021965 | 20130731
Length = 747
Score = 55.8 bits (133), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSA---LVLCHTRELAYQICHEFERFSKHL 58
D+ A +G GKTA F L TL+++ V A L+L TRELA Q+ E +K
Sbjct: 179 DICGSAITGSGKTAAFALPTLERLLFRPKGVHAIRVLILTPTRELAVQVHSMIEELAKFT 238
Query: 59 PDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARD 100
+++ + GGV K + L++ P IVV TPGR++ R+
Sbjct: 239 DNIRCCLIVGGVPTKGQEAALRSR-PDIVVATPGRMIDHLRN 279
>Medtr7g109720.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:44909506-44914537 | 20130731
Length = 775
Score = 55.5 bits (132), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI------DPVAGQVSALVLCH-TRELAYQICHEFERF 54
D+I AK+G GKTA FVL + I G + V+C TRELA+QI E ++F
Sbjct: 270 DIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIG--VICAPTRELAHQIYLEAKKF 327
Query: 55 SKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
+K ++V+ YGG++ LK C IVV TPGR++ + + K L+
Sbjct: 328 AKAY-GIRVSAVYGGMSKLEQFKELKAGC-EIVVATPGRLIDMLKMKALA 375
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI--DPVAGQ------VSALVLCHTRELAYQICHEFER 53
DV+ +AK+G GKT F+L +++ + P + + LV+C TRELA Q E +
Sbjct: 140 DVLAKAKTGTGKTVAFLLPSIEVVVKSPPNNRGQNQTPILVLVVCPTRELACQAAAEATK 199
Query: 54 FSKHLPDLKVAVCYGGVNIKV-HKDLLKNECPHIVVGTPGRI 94
K+ P + V GG ++ K + KN C I++ TPGR+
Sbjct: 200 LLKYHPTIGAQVVIGGTSLSSEQKRIQKNPC-QILIATPGRL 240
>Medtr4g049910.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:17617607-17621556 | 20130731
Length = 450
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSKHLPDL 61
D+I QA++G GKT FVL L ++DP AL +C TRELA Q ++ K
Sbjct: 96 DLIAQARNGSGKTTCFVLGMLSRVDPNMKAPQALCICPTRELAIQNNEVLQKMGK----- 150
Query: 62 KVAVCYGGVNIKVHKDLLKNECP--------HIVVGTPGRILALARDKEL 103
Y G++ ++ + P +V+GTPG I +L K+L
Sbjct: 151 -----YTGISSELAIPSMDKIPPSRRPPIMAQVVIGTPGTINSLKNHKKL 195
>Medtr8g032230.1 | DEAD-box helicase family protein | HC |
chr8:12119817-12118310 | 20130731
Length = 171
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQI-DPVAGQVSALVLCHTRELAYQICHEFERFSKHLPD 60
DVI +++G GKT F L L + D A V+ TRELAYQ+ +FE +
Sbjct: 48 DVIGFSQTGSGKTGAFALPILHALLDAPRHGFFACVISPTRELAYQVPEQFEALGSEI-G 106
Query: 61 LKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
+K AV G +++ V + + + P I VGTPGR+L
Sbjct: 107 VKCAVLVGQMDM-VQQSIEIAKGPDIFVGTPGRVL 140
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 2 DVICQAKSGMGKTAVFV---LSTLQQIDPVAGQVS-----ALVLCHTRELAYQICHEFER 53
DVI A++G GKTA FV LS + ++ P++ + A+V+ TRELA QI E +
Sbjct: 287 DVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVK 346
Query: 54 FSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
F++++ +KV GG +I+ ++ C IV+ TPGR++
Sbjct: 347 FAQYM-GIKVVSIVGGQSIEEQGFKIRQGC-EIVIATPGRLI 386
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 2 DVICQAKSGMGKTAVFV---LSTLQQIDPVAGQVS-----ALVLCHTRELAYQICHEFER 53
DVI A++G GKTA FV LS + ++ P++ + A+V+ TRELA QI E +
Sbjct: 287 DVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVK 346
Query: 54 FSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
F++++ +KV GG +I+ ++ C IV+ TPGR++
Sbjct: 347 FAQYM-GIKVVSIVGGQSIEEQGFKIRQGC-EIVIATPGRLI 386
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 2 DVICQAKSGMGKTAVFV---LSTLQQIDPVAGQVS-----ALVLCHTRELAYQICHEFER 53
DVI A++G GKTA FV LS + ++ P++ + A+V+ TRELA QI E +
Sbjct: 287 DVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVK 346
Query: 54 FSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
F++++ +KV GG +I+ ++ C IV+ TPGR++
Sbjct: 347 FAQYM-GIKVVSIVGGQSIEEQGFKIRQGC-EIVIATPGRLI 386
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 53.9 bits (128), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 10/102 (9%)
Query: 2 DVICQAKSGMGKTAVFV---LSTLQQIDPVAGQVS-----ALVLCHTRELAYQICHEFER 53
DVI A++G GKTA FV LS + ++ P++ + A+V+ TRELA QI E +
Sbjct: 325 DVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEDETVK 384
Query: 54 FSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRIL 95
F++++ +KV GG +I+ ++ C IV+ TPGR++
Sbjct: 385 FAQYM-GIKVVSIVGGQSIEEQGFKIRQGC-EIVIATPGRLI 424
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 16/117 (13%)
Query: 2 DVICQAKSGMGKTAVFVL---------STLQQIDPVAGQVSALVLCHTRELAYQICHEFE 52
D+I A +G GKT VFVL + I P G L++C +RELA Q E
Sbjct: 183 DMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPF-GLIICPSRELARQTYEVIE 241
Query: 53 RFSKHL-----PDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
F L P+L+ +C GG++++ +++K HIVV TPGR+ + K+++
Sbjct: 242 EFLLPLKEAGYPELRPLLCIGGIDMRSQLEIVKKGV-HIVVATPGRLKDMLAKKKMN 297
>Medtr7g057250.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:20515753-20505772 | 20130731
Length = 798
Score = 53.1 bits (126), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 23/122 (18%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQ----------IDPVAGQVSA-----------LVLCHT 40
DVI A++G GKT F L LQ+ I V G+ +A L++ T
Sbjct: 202 DVIGAAETGSGKTLAFGLPILQRLLEEREKAESISGVNGEEAAEKYATTGLLRSLIIAPT 261
Query: 41 RELAYQICHEFERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARD 100
RELA Q+ + +KH+ +++V GG+ + + LLK P IVV TPGR+ L
Sbjct: 262 RELALQVAKHLKAVAKHI-NVRVTAIVGGILPEKQERLLKAR-PEIVVATPGRLWELMSS 319
Query: 101 KE 102
E
Sbjct: 320 GE 321
>Medtr3g049990.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:19680414-19670656 | 20130731
Length = 760
Score = 52.4 bits (124), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSA---LVLCHTRELAYQICHEFERFSKHL 58
D+ A +G GKTA F L TL+++ +V A L+L TRELA Q+ + S+
Sbjct: 190 DICGSAITGSGKTAAFALPTLERLLFRPKRVHAIRVLILTPTRELAAQVQSMIKSLSQ-F 248
Query: 59 PDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARD 100
D++ + GG++ K + L++ P IVV TPGR++ R+
Sbjct: 249 TDIRCCLIVGGLSTKEQEVALRSR-PDIVVATPGRMIDHLRN 289
>Medtr6g056080.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:20125418-20119486 | 20130731
Length = 681
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQID--PVA-------GQV-SALVLCHTRELAYQICHEF 51
D++ +A++G GKT FVL L+ + P G+V S +VL TRELA Q+ +F
Sbjct: 141 DLVGRARTGQGKTLAFVLPILESLTNGPAKSVRKTGYGRVPSVIVLLPTRELANQVYADF 200
Query: 52 ERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRI 94
E + L L YGG + L+ IV+GTPGRI
Sbjct: 201 ELYGSSL-GLSACAVYGGAPYGAQETKLRRGV-DIVIGTPGRI 241
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQ---------IDPVAGQVSALVLCHTRELAYQICHEFE 52
D+I A +G GKT VFVL + I P G L++C + ELA Q E
Sbjct: 185 DMIGIAFTGSGKTLVFVLPMIMMAMQEEIRMPIVPGEGPF-GLIICPSWELARQTYEVIE 243
Query: 53 RFSKHL-----PDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
+F L P+L+ +C GG++++ ++K HIVV TPGR+ + K+++
Sbjct: 244 QFLLPLKEAGYPELRPLLCIGGIDMRSQLKIVKKGV-HIVVATPGRLKDMLAKKKMN 299
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 49.7 bits (117), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 18/119 (15%)
Query: 2 DVICQAKSGMGKTAVFVLSTLQQID---------PVAGQV-------SALVLCHTRELAY 45
D++ A++G GKTA F + I P G V +AL+L TREL+
Sbjct: 178 DLMACAQTGSGKTAAFCFPIISGIMKERLASGLLPRGGGVDSDVAFPTALILSPTRELSC 237
Query: 46 QICHEFERFSKHLPDLKVAVCYGGVNIKVHKDLLKNECPHIVVGTPGRILALARDKELS 104
QI E +F+ H +K+AV YGG I +L+ I+V TPGR++ L + +S
Sbjct: 238 QIHAEACKFA-HQTGVKIAVVYGGAPIGQQLRILERGV-DILVATPGRLVDLIERERVS 294