Miyakogusa Predicted Gene
- Lj5g3v0539540.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0539540.1 Non Characterized Hit- tr|B9FU25|B9FU25_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,29.71,0.0002,TPX2,Xklp2 targeting protein; seg,NULL;
coiled-coil,NULL; FAMILY NOT
NAMED,NULL,gene.Ljchr5_pseudomol_20120830.path1.gene1220.1
(406 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g012530.1 | TPX2 (targeting protein for Xklp2) family prot... 420 e-117
Medtr1g012530.2 | TPX2 (targeting protein for Xklp2) family prot... 338 6e-93
Medtr3g107050.1 | TPX2 (targeting protein for Xklp2) family prot... 301 7e-82
Medtr3g107050.2 | TPX2 (targeting protein for Xklp2) family prot... 301 7e-82
Medtr1g055085.1 | TPX2 (targeting protein for Xklp2) family prot... 145 7e-35
Medtr7g106750.1 | targeting protein for Xklp2 protein | HC | chr... 142 5e-34
Medtr1g075310.1 | TPX2 (targeting protein for Xklp2) family prot... 122 7e-28
Medtr1g075310.2 | TPX2 (targeting protein for Xklp2) family prot... 122 7e-28
Medtr1g080690.1 | TPX2 (targeting protein for Xklp2) family prot... 104 2e-22
Medtr7g115310.1 | FAD/NAD(P)-binding oxidoreductase family prote... 101 2e-21
Medtr6g022230.1 | TPX2 (targeting protein for Xklp2) family prot... 57 2e-08
>Medtr1g012530.1 | TPX2 (targeting protein for Xklp2) family protein
| HC | chr1:2520568-2514968 | 20130731
Length = 459
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/418 (58%), Positives = 278/418 (66%), Gaps = 41/418 (9%)
Query: 1 MMDLIILSPADGLEVVHQNGVHDEPSNYGEDCVVSNDVDSSATETSETVSPNGNVEENFN 60
MMD + PADGL+ VHQNGVHDEPSN GED V SND+D T +ET P+GN EN N
Sbjct: 1 MMDPVNSLPADGLDDVHQNGVHDEPSNSGEDAV-SNDLDPHVTVNTETFVPDGN-SENIN 58
Query: 61 QSDSAAPGNSSIAEIEGSNSNMDSKNMTIALE-EVKITDQTEQPRAPKGLVKNKNAKAPS 119
Q +S A GNS++ EIEGSN N+D N+T++ E EVKI TEQ RA KG VKNKNAK S
Sbjct: 59 QLESTATGNSAMKEIEGSNDNVDGSNLTVSKEKEVKIKVSTEQSRAQKGPVKNKNAKVGS 118
Query: 120 SSGVHASLTKRSKNGKDKQPSSAVSNVTLALDSRPRQSIKGRPFNDRQSEMAKLLQSFQH 179
SSGV+ASL K SK GKDKQ S AVSN T ALDSRPRQ IK R NDRQS+++K
Sbjct: 119 SSGVNASLVKNSKIGKDKQASPAVSNGTSALDSRPRQPIKNRSSNDRQSQLSK------Q 172
Query: 180 SSTSDGASSEVTT-------------------GDT-----EDAKPRRLGTLPDYGFSFKC 215
S S+ ASS+V G++ ED KPRR+GTLP+YGFSF+C
Sbjct: 173 PSKSEAASSDVAVEKKKPKSLKKGPLDKVQGEGESSLTNREDTKPRRVGTLPNYGFSFRC 232
Query: 216 GERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPMPTFYQE 275
GERAE+R+EF TK+EEKIQAKE EK+++QAKSKE+QEAEIK LRKSLTFKATP+PTFYQE
Sbjct: 233 GERAEKRREFLTKVEEKIQAKEEEKSSLQAKSKESQEAEIKKLRKSLTFKATPLPTFYQE 292
Query: 276 PPPTKVELKKIPITRPKSPKLGRKKXXXXXXXXXXXXXXXQQGRLSLDEKVLRSNLSKGV 335
P P KVELKKIP TR KSPKLGRKK +QGRLSL+EKV +SN GV
Sbjct: 293 PAPPKVELKKIPTTRAKSPKLGRKKTSTNSESDGNGSCSSRQGRLSLNEKVSQSNSPTGV 352
Query: 336 TPVHHKKPQRRSLPPRLACXXXXXXXXXXXXXXXXXVHDATKKDISFSDATGEEKIEI 393
T H KKP R+SLP RLA ATKKD S S TGEEK EI
Sbjct: 353 TLAHQKKPLRKSLPTRLASERTNSAAAPTSK--------ATKKDTSLSKGTGEEKTEI 402
>Medtr1g012530.2 | TPX2 (targeting protein for Xklp2) family protein
| HC | chr1:2520543-2514968 | 20130731
Length = 347
Score = 338 bits (867), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 191/314 (60%), Positives = 225/314 (71%), Gaps = 33/314 (10%)
Query: 1 MMDLIILSPADGLEVVHQNGVHDEPSNYGEDCVVSNDVDSSATETSETVSPNGNVEENFN 60
MMD + PADGL+ VHQNGVHDEPSN GED VSND+D T +ET P+GN EN N
Sbjct: 1 MMDPVNSLPADGLDDVHQNGVHDEPSNSGED-AVSNDLDPHVTVNTETFVPDGN-SENIN 58
Query: 61 QSDSAAPGNSSIAEIEGSNSNMDSKNMTIALE-EVKITDQTEQPRAPKGLVKNKNAKAPS 119
Q +S A GNS++ EIEGSN N+D N+T++ E EVKI TEQ RA KG VKNKNAK S
Sbjct: 59 QLESTATGNSAMKEIEGSNDNVDGSNLTVSKEKEVKIKVSTEQSRAQKGPVKNKNAKVGS 118
Query: 120 SSGVHASLTKRSKNGKDKQPSSAVSNVTLALDSRPRQSIKGRPFNDRQSEMAKLLQSFQH 179
SSGV+ASL K SK GKDKQ S AVSN T ALDSRPRQ IK R NDRQS+++K
Sbjct: 119 SSGVNASLVKNSKIGKDKQASPAVSNGTSALDSRPRQPIKNRSSNDRQSQLSK------Q 172
Query: 180 SSTSDGASSEVTT-------------------GDT-----EDAKPRRLGTLPDYGFSFKC 215
S S+ ASS+V G++ ED KPRR+GTLP+YGFSF+C
Sbjct: 173 PSKSEAASSDVAVEKKKPKSLKKGPLDKVQGEGESSLTNREDTKPRRVGTLPNYGFSFRC 232
Query: 216 GERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPMPTFYQE 275
GERAE+R+EF TK+EEKIQAKE EK+++QAKSKE+QEAEIK LRKSLTFKATP+PTFYQE
Sbjct: 233 GERAEKRREFLTKVEEKIQAKEEEKSSLQAKSKESQEAEIKKLRKSLTFKATPLPTFYQE 292
Query: 276 PPPTKVELKKIPIT 289
P P KVELKK+ ++
Sbjct: 293 PAPPKVELKKVNLS 306
>Medtr3g107050.1 | TPX2 (targeting protein for Xklp2) family protein
| HC | chr3:49471851-49476541 | 20130731
Length = 453
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 191/425 (44%), Positives = 245/425 (57%), Gaps = 59/425 (13%)
Query: 2 MDLIILSPADGLEVVHQNGVHDEPSNYGEDCVVSNDVDSSATETSETVSPNGNVEENFNQ 61
MD + S DGL HQ + N +D V N V T+ +TV NGN +N +
Sbjct: 1 MDPVNTSLEDGL---HQQQLF----NSQQDAVDFNVV----TQIKQTVLSNGNFNDNVSM 49
Query: 62 SDSAAPGNSSIAEIEGSNSNMDSKNMTIALEEVKITDQTEQPRAPKGLVKNKNAKAPSSS 121
+ G S +IEG+N N+ SK + E++I D+TE+ R K LVKN N+K PS
Sbjct: 50 EEEEEEG--SNGKIEGNNVNV-SKEV-----EIEIVDETEKSRTKKDLVKNNNSKLPSPR 101
Query: 122 GVHASLTKRSKNGKDKQPS--SAVSNVTLALDSRPRQSIKGRPFNDRQSEMAKLLQSFQH 179
G+ + +++K+GKD++ + S+VSN T DS PRQ + R ND+Q+ ++K H
Sbjct: 102 GLRMTSVRKNKDGKDEEAAVASSVSNGTSTFDSHPRQPVNNRAVNDKQTHLSK------H 155
Query: 180 SSTSDGASSEVTTGDT------------------------EDAKPRRLGTLPDYGFSFKC 215
S +D AS+E T EDAKPRR+GT+P YGFSFKC
Sbjct: 156 SGKTDAASTEAPMEKTRPHLIKKEPLDNLPGKAESSFPTSEDAKPRRVGTMPTYGFSFKC 215
Query: 216 GERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPMPTFYQE 275
ERAERRKEFY+KLEE+I AKE E++N+QAK+KE+QEAEIK LRK L FKATPMP+FYQE
Sbjct: 216 NERAERRKEFYSKLEERIHAKEVEESNIQAKTKESQEAEIKRLRKKLAFKATPMPSFYQE 275
Query: 276 PPPTKVELKKIPITRPKSPKLGRKKXXXXXXX-XXXXXXXXQQGRLSLDEKVLRSNLSKG 334
P P++VELKKIP TR KSPKLGRKK QQ RLSLDEKV ++N +KG
Sbjct: 276 PTPSRVELKKIPTTRAKSPKLGRKKSSTMSSELDVNSNSSAQQCRLSLDEKVSQNNPTKG 335
Query: 335 VTPVHHKKPQRRSLPPRLACXXXXXXXXXXXXXXXXXVHD-------ATKKDISFSDATG 387
++ V KKPQRRSLPPRL VHD T + + S AT
Sbjct: 336 ISHVQPKKPQRRSLPPRLTPERISSSNSVTARTSSKAVHDEKTSLSSVTTEVTTLSVATR 395
Query: 388 EEKIE 392
EEK+E
Sbjct: 396 EEKVE 400
>Medtr3g107050.2 | TPX2 (targeting protein for Xklp2) family protein
| HC | chr3:49472302-49476481 | 20130731
Length = 453
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 191/425 (44%), Positives = 245/425 (57%), Gaps = 59/425 (13%)
Query: 2 MDLIILSPADGLEVVHQNGVHDEPSNYGEDCVVSNDVDSSATETSETVSPNGNVEENFNQ 61
MD + S DGL HQ + N +D V N V T+ +TV NGN +N +
Sbjct: 1 MDPVNTSLEDGL---HQQQLF----NSQQDAVDFNVV----TQIKQTVLSNGNFNDNVSM 49
Query: 62 SDSAAPGNSSIAEIEGSNSNMDSKNMTIALEEVKITDQTEQPRAPKGLVKNKNAKAPSSS 121
+ G S +IEG+N N+ SK + E++I D+TE+ R K LVKN N+K PS
Sbjct: 50 EEEEEEG--SNGKIEGNNVNV-SKEV-----EIEIVDETEKSRTKKDLVKNNNSKLPSPR 101
Query: 122 GVHASLTKRSKNGKDKQPS--SAVSNVTLALDSRPRQSIKGRPFNDRQSEMAKLLQSFQH 179
G+ + +++K+GKD++ + S+VSN T DS PRQ + R ND+Q+ ++K H
Sbjct: 102 GLRMTSVRKNKDGKDEEAAVASSVSNGTSTFDSHPRQPVNNRAVNDKQTHLSK------H 155
Query: 180 SSTSDGASSEVTTGDT------------------------EDAKPRRLGTLPDYGFSFKC 215
S +D AS+E T EDAKPRR+GT+P YGFSFKC
Sbjct: 156 SGKTDAASTEAPMEKTRPHLIKKEPLDNLPGKAESSFPTSEDAKPRRVGTMPTYGFSFKC 215
Query: 216 GERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPMPTFYQE 275
ERAERRKEFY+KLEE+I AKE E++N+QAK+KE+QEAEIK LRK L FKATPMP+FYQE
Sbjct: 216 NERAERRKEFYSKLEERIHAKEVEESNIQAKTKESQEAEIKRLRKKLAFKATPMPSFYQE 275
Query: 276 PPPTKVELKKIPITRPKSPKLGRKKXXXXXXX-XXXXXXXXQQGRLSLDEKVLRSNLSKG 334
P P++VELKKIP TR KSPKLGRKK QQ RLSLDEKV ++N +KG
Sbjct: 276 PTPSRVELKKIPTTRAKSPKLGRKKSSTMSSELDVNSNSSAQQCRLSLDEKVSQNNPTKG 335
Query: 335 VTPVHHKKPQRRSLPPRLACXXXXXXXXXXXXXXXXXVHD-------ATKKDISFSDATG 387
++ V KKPQRRSLPPRL VHD T + + S AT
Sbjct: 336 ISHVQPKKPQRRSLPPRLTPERISSSNSVTARTSSKAVHDEKTSLSSVTTEVTTLSVATR 395
Query: 388 EEKIE 392
EEK+E
Sbjct: 396 EEKVE 400
>Medtr1g055085.1 | TPX2 (targeting protein for Xklp2) family protein
| HC | chr1:24263571-24261070 | 20130731
Length = 452
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 80/91 (87%), Gaps = 1/91 (1%)
Query: 210 GFSFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPM 269
GFSF+ ERAE+R+EF++KLEEKIQ KEAE +N+Q KSKE+QEAEIK LRK +TFKA PM
Sbjct: 233 GFSFRLEERAEKRREFFSKLEEKIQEKEAEISNLQEKSKESQEAEIKKLRKRMTFKAAPM 292
Query: 270 PTFYQEPPPTKVELKKIPITRPKSPKLGRKK 300
P+FY+EPPP KVELKKIP TRPKSPKLGR K
Sbjct: 293 PSFYKEPPP-KVELKKIPTTRPKSPKLGRNK 322
>Medtr7g106750.1 | targeting protein for Xklp2 protein | HC |
chr7:43471923-43475667 | 20130731
Length = 421
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 79/91 (86%), Gaps = 1/91 (1%)
Query: 210 GFSFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPM 269
GFS + ERAE+RKEF++K+EEK+ AKEAEKTN QAKSKE QE EIK LRKSLTFKA PM
Sbjct: 238 GFSSRLEERAEKRKEFFSKVEEKVLAKEAEKTNQQAKSKENQEKEIKQLRKSLTFKAAPM 297
Query: 270 PTFYQEPPPTKVELKKIPITRPKSPKLGRKK 300
P+FY+EPPP KVELKKIP TRP+SPKLGR +
Sbjct: 298 PSFYKEPPP-KVELKKIPTTRPRSPKLGRHR 327
>Medtr1g075310.1 | TPX2 (targeting protein for Xklp2) family protein
| HC | chr1:33342141-33338595 | 20130731
Length = 383
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 212 SFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPMPT 271
SF+ ERA+RRKEFY+KLEEK QA EAEK +A+SKE +E IK LR+SL FKA+PMP+
Sbjct: 217 SFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPS 276
Query: 272 FYQEPPPTKVELKKIPITRPKSPKLGRKK 300
FY E PP KV+LKK+P TR KSPKLGR+K
Sbjct: 277 FYHEGPPPKVDLKKLPPTRAKSPKLGRRK 305
>Medtr1g075310.2 | TPX2 (targeting protein for Xklp2) family protein
| HC | chr1:33341243-33338595 | 20130731
Length = 383
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/89 (67%), Positives = 72/89 (80%)
Query: 212 SFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPMPT 271
SF+ ERA+RRKEFY+KLEEK QA EAEK +A+SKE +E IK LR+SL FKA+PMP+
Sbjct: 217 SFRSTERAQRRKEFYSKLEEKQQAMEAEKNQNEARSKEEKEEAIKQLRRSLKFKASPMPS 276
Query: 272 FYQEPPPTKVELKKIPITRPKSPKLGRKK 300
FY E PP KV+LKK+P TR KSPKLGR+K
Sbjct: 277 FYHEGPPPKVDLKKLPPTRAKSPKLGRRK 305
>Medtr1g080690.1 | TPX2 (targeting protein for Xklp2) family protein
| HC | chr1:35884532-35888074 | 20130731
Length = 369
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 63/85 (74%)
Query: 212 SFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSLTFKATPMPT 271
+F+ ERA +R+EFY KLEEK +A EK+ +A+ KE QEA IK +RK+L KA P+P
Sbjct: 195 TFRSSERAAKRREFYLKLEEKNRALLEEKSQYEARLKEEQEAAIKQMRKNLVIKAKPVPN 254
Query: 272 FYQEPPPTKVELKKIPITRPKSPKL 296
FY E PP K ELKK+P+TRPKSPKL
Sbjct: 255 FYYEAPPPKAELKKLPLTRPKSPKL 279
>Medtr7g115310.1 | FAD/NAD(P)-binding oxidoreductase family protein
| HC | chr7:47633584-47625724 | 20130731
Length = 867
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
Query: 203 LGTLPDYGFSFKCGERAERRKEFYTKLEEKIQAKEAEKTNMQAKSKETQEAEIKMLRKSL 262
+GT P +F+ ERAE+RKEFY KLEEK +A E E+ +A+ KE +EA +K LRKSL
Sbjct: 207 VGTAP----TFRIYERAEKRKEFYMKLEEKNRALEEERLQYEARRKEEEEAALKQLRKSL 262
Query: 263 TFKATPMPTFYQEPPPTKVELKKIPITRPKSPKLGRKK 300
KA P+P+FY E PP K ELKK+P+TRPKSPKL R+K
Sbjct: 263 VIKAKPVPSFYYEGPPPKTELKKLPLTRPKSPKLSRRK 300
>Medtr6g022230.1 | TPX2 (targeting protein for Xklp2) family
protein, putative | HC | chr6:7750365-7745249 | 20130731
Length = 572
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 211 FSFKCGERAERRKEFYTKLEEKIQAKEAEKTN-MQAKSKETQEAEIKM-LRKSLTFKATP 268
FS + ERA RRK+ KLEEK A E +K + K KE +EI+ LR+S F+A P
Sbjct: 416 FSLRTEERAARRKK---KLEEKFNANEEQKVQQLHTKLKEKTGSEIRRKLRQSFCFQARP 472
Query: 269 MPTFYQEPPPTKVELKKIPITRPKSPKLGR 298
+P FY+E + +E +K+ T +S GR
Sbjct: 473 LPDFYKERKASNIETRKVIQTHYESSNEGR 502