Miyakogusa Predicted Gene

Lj5g3v0529460.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0529460.2 Non Characterized Hit- tr|C6TH49|C6TH49_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4 S,63.51,4e-18,no
description,NULL; FAMILY NOT NAMED,NULL; Ubiquitin-like,NULL;
seg,NULL,CUFF.53232.2
         (269 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g012600.1 | hypothetical protein | HC | chr1:2549497-25547...   266   1e-71
Medtr3g106830.1 | hypothetical protein | HC | chr3:49374368-4937...   145   5e-35
Medtr4g074450.1 | U11/U12 small nuclear ribonucleoprotein 25 kDa...    78   9e-15
Medtr4g108000.6 | anamorsin-like protein | HC | chr4:44769429-44...    75   8e-14
Medtr4g074450.2 | U11/U12 small nuclear ribonucleoprotein 25 kDa...    70   2e-12
Medtr4g108000.7 | anamorsin-like protein | HC | chr4:44769429-44...    69   7e-12
Medtr4g108000.5 | anamorsin-like protein | HC | chr4:44769527-44...    68   7e-12

>Medtr1g012600.1 | hypothetical protein | HC | chr1:2549497-2554775
           | 20130731
          Length = 266

 Score =  266 bits (681), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 148/274 (54%), Positives = 171/274 (62%), Gaps = 14/274 (5%)

Query: 1   MAETSLILTTTTEKIKSRKLLQFSTISIIDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSF 60
           MAETSL L     K K+      S+ S    IF+ KS LY KLPS+P RLSVLKLDG+SF
Sbjct: 1   MAETSLSLILPNMKKKTTLFSSSSSSSSPLPIFSTKSLLYDKLPSEPLRLSVLKLDGTSF 60

Query: 61  DIQVSKTASIAELKDAVEAVFSHMPEKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNY 120
           D+ VSK A+IAELKDAVE VFS+MP+ GPAKISWPHVWGQFCLCYDGQKLVTE+DYL+NY
Sbjct: 61  DVHVSKNATIAELKDAVEGVFSYMPQHGPAKISWPHVWGQFCLCYDGQKLVTEKDYLKNY 120

Query: 121 GIKDGDELHFMRHVSNNCTXXXXXXXXXXXXXXXXXXXXXSQVNSCEPEENC-----NDG 175
           G+KD D+LHF+RH SNNC                      SQ N C+ +ENC     +D 
Sbjct: 121 GVKDSDQLHFIRHASNNC--GARRKRSKKRVFHLKQHRRLSQANYCKQKENCDADEDDDD 178

Query: 176 EVSSDGEEDQENVKTKHCIGXXXXXXHVGKNKLTGIVGELFSCTPLXXXXXXXXXXXXXX 235
              S  EE  EN +TKH I       HV KNK+TG VGEL S TPL              
Sbjct: 179 GDISSDEEALENAETKHHI----EEVHVRKNKITGFVGELLSYTPLAVVRKTRAQNQIFP 234

Query: 236 XTIPRCLLGSFRKIRRIVCFGRRRHYSMRLTWSE 269
            TI RCL+G  RKI+RIVCFGRR+ Y    TW +
Sbjct: 235 STISRCLIGGLRKIKRIVCFGRRQQYP---TWRQ 265


>Medtr3g106830.1 | hypothetical protein | HC |
           chr3:49374368-49372217 | 20130731
          Length = 281

 Score =  145 bits (365), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 141/297 (47%), Gaps = 57/297 (19%)

Query: 8   LTTTTEKIKSRKL-LQFSTISIIDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSF------ 60
           LT+ + +   R L +Q S++ I+D         Y KLPSQ   L+VLKLD SSF      
Sbjct: 4   LTSVSNESPRRSLSIQLSSMIIVDCTLP-----YDKLPSQNLTLTVLKLDSSSFRNLPLL 58

Query: 61  ---------------------------DIQVSKTASIAELKDAVEAVFSHMPEKGPAKIS 93
                                      +++V+KTA++A LK AVEA F H PEK    IS
Sbjct: 59  ADFSSNSYSVLLHFFDLEFICKILIVSEVEVAKTATVAVLKQAVEAAFRHKPEK----IS 114

Query: 94  WPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDELHFMRHVSNNCTXXXXXXXXXXXXXX 153
           WP VWGQFCLCY+GQKLVTE DYLR+YGIKDGD+L F+RHVSN C               
Sbjct: 115 WPLVWGQFCLCYEGQKLVTETDYLRDYGIKDGDQLRFIRHVSNVCN--FQRKPKKRTVNL 172

Query: 154 XXXXXXXSQVNSCEPEENCNDGEVSSDGEEDQENVKTKHCIGXXXXXXHVG-KNKLTGIV 212
                  SQVN C   EN ++  +  D       +++ +          +G  ++LTG +
Sbjct: 173 KQHGRSLSQVNRCLLTENGDEDNIGLDSIV----IESGNIQDCNAEENRLGVSSRLTGYL 228

Query: 213 GELFSCTPLXXXXXXXXXXXXXXXTIPRCLLGSFRKIRRIVCFGRRRHYSMRLTWSE 269
           G +FS                    I + +  SF+K++ IV   R+ H   R  W+E
Sbjct: 229 GGMFS-----EARMAVVRKARLEGGISKGIASSFKKVKGIVGHCRKPH--RRHAWTE 278


>Medtr4g074450.1 | U11/U12 small nuclear ribonucleoprotein 25
           kDa-like protein | HC | chr4:28358541-28355520 |
           20130731
          Length = 162

 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 59/89 (66%), Gaps = 2/89 (2%)

Query: 48  FRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEK--GPAKISWPHVWGQFCLCY 105
            R++VLKLD +SFD+ +  TA++ +LK A++   ++M +   G   ISW  VW  +CL +
Sbjct: 50  MRITVLKLDTTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISWRSVWANYCLSF 109

Query: 106 DGQKLVTEEDYLRNYGIKDGDELHFMRHV 134
           D  KL+ ++D L+N G+++  ++HF+ +V
Sbjct: 110 DNNKLLNDDDVLQNLGVRNNSQIHFVPYV 138


>Medtr4g108000.6 | anamorsin-like protein | HC |
           chr4:44769429-44762505 | 20130731
          Length = 436

 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 57/86 (66%), Gaps = 2/86 (2%)

Query: 48  FRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEK--GPAKISWPHVWGQFCLCY 105
            R++VLKLD +SFD+ +  TA++ +LK A++   ++M +   G   ISW  VW  +CL +
Sbjct: 318 MRITVLKLDTTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISWRSVWANYCLSF 377

Query: 106 DGQKLVTEEDYLRNYGIKDGDELHFM 131
           D  KL+ ++D L+N G+++  ++HF+
Sbjct: 378 DNNKLLNDDDVLQNLGVRNNSQIHFV 403


>Medtr4g074450.2 | U11/U12 small nuclear ribonucleoprotein 25
           kDa-like protein | HC | chr4:28358538-28356849 |
           20130731
          Length = 146

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 56/92 (60%), Gaps = 2/92 (2%)

Query: 39  LYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEK--GPAKISWPH 96
           L G       R++VLKLD +SFD+ +  TA++ +LK A++   ++M +   G   ISW  
Sbjct: 41  LIGLELGSAMRITVLKLDTTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISWRS 100

Query: 97  VWGQFCLCYDGQKLVTEEDYLRNYGIKDGDEL 128
           VW  +CL +D  KL+ ++D L+N G+++  ++
Sbjct: 101 VWANYCLSFDNNKLLNDDDVLQNLGVRNNSQV 132


>Medtr4g108000.7 | anamorsin-like protein | HC |
           chr4:44769429-44763927 | 20130731
          Length = 414

 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 54/83 (65%), Gaps = 2/83 (2%)

Query: 48  FRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEK--GPAKISWPHVWGQFCLCY 105
            R++VLKLD +SFD+ +  TA++ +LK A++   ++M +   G   ISW  VW  +CL +
Sbjct: 318 MRITVLKLDTTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISWRSVWANYCLSF 377

Query: 106 DGQKLVTEEDYLRNYGIKDGDEL 128
           D  KL+ ++D L+N G+++  ++
Sbjct: 378 DNNKLLNDDDVLQNLGVRNNSQV 400


>Medtr4g108000.5 | anamorsin-like protein | HC |
           chr4:44769527-44763927 | 20130731
          Length = 399

 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 54/83 (65%), Gaps = 2/83 (2%)

Query: 48  FRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEK--GPAKISWPHVWGQFCLCY 105
            R++VLKLD +SFD+ +  TA++ +LK A++   ++M +   G   ISW  VW  +CL +
Sbjct: 303 MRITVLKLDTTSFDVILMNTATLKDLKLAIKKKVNYMEQSSMGHRHISWRSVWANYCLSF 362

Query: 106 DGQKLVTEEDYLRNYGIKDGDEL 128
           D  KL+ ++D L+N G+++  ++
Sbjct: 363 DNNKLLNDDDVLQNLGVRNNSQV 385