Miyakogusa Predicted Gene
- Lj5g3v0528760.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0528760.1 Non Characterized Hit- tr|I1ILY3|I1ILY3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,30.37,2e-16,seg,NULL;
Kinetochor_Ybp2,YAP-binding/Alf4/Glomulin,CUFF.53167.1
(609 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g014840.1 | aberrant root formation protein | HC | chr4:42... 877 0.0
Medtr4g014840.2 | aberrant root formation protein | HC | chr4:42... 877 0.0
Medtr1g013030.1 | aberrant root formation protein | HC | chr1:27... 468 e-132
Medtr1g012280.1 | aberrant root formation protein, putative | LC... 120 3e-27
Medtr1g012260.1 | aberrant root formation protein, putative | LC... 87 5e-17
Medtr1g013010.1 | hypothetical protein | HC | chr1:2789761-27905... 84 4e-16
Medtr1g012290.1 | hypothetical protein | LC | chr1:2403799-24031... 54 5e-07
Medtr1g012330.1 | hypothetical protein | LC | chr1:2418533-24167... 53 9e-07
>Medtr4g014840.1 | aberrant root formation protein | HC |
chr4:4243000-4250375 | 20130731
Length = 604
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/611 (71%), Positives = 501/611 (81%), Gaps = 9/611 (1%)
Query: 1 MSVAVEGEAVSFQASEARNDVRRILESYSKLAEAGDFNDSENTILELVKFLDSLSDTTLS 60
MS+++E E SF SEA +++RIL S KL E GD ++ ENT ELV FLDSL D S
Sbjct: 1 MSISLESETASFLGSEAHTNLQRILRSCPKLDEVGDSHEYENTFSELVNFLDSLLDAAFS 60
Query: 61 EPDDERAENNAYGALFEIHRYISSPSLHQEVVDALSFELPKAVSKFGSISSRLLDMAISI 120
+P +E EN+A+ AL EIHRYI SPSL QEVVDALSFE+PKAVSKF ISS+ DMAISI
Sbjct: 61 DPYNEHKENDAFEALSEIHRYICSPSLDQEVVDALSFEVPKAVSKFAGISSKFSDMAISI 120
Query: 121 IDQLIVKCGPRDMLSILCNTLGYSSKMTKPACYIVSPLSGLSKVFISIQRRQFEQVKEAV 180
IDQ I KCGPRDMLSILC+TLGYSSK+T A YIV PLSG+SKV ISI+RRQF+QVKE +
Sbjct: 121 IDQFIAKCGPRDMLSILCDTLGYSSKVTNAASYIVPPLSGISKVLISIRRRQFQQVKETI 180
Query: 181 PMILNVLKTVXXXXXXXXXXXVFVKAVEIAKSIHEVCDKL--ESVKKEKLQELLGLYVLQ 238
P+ILNVLK V VF +AVEIA SI+EVCDKL E +EK + LLGLYVLQ
Sbjct: 181 PIILNVLKAVSLKSDEELDN-VFDRAVEIANSIYEVCDKLVDEDAAREKFRSLLGLYVLQ 239
Query: 239 CMALVSTSISYKAAICDSLVLQLSQISSYCGLSYLFLLTTYDVETVASSVFGDDKDDCMG 298
C+ALVS +SY A+ C SLVLQLS+ISSYCGLSYL L+TTYDVE VAS+VFG++KDD M
Sbjct: 240 CLALVSAGVSYTASSCHSLVLQLSRISSYCGLSYLSLVTTYDVEVVASAVFGENKDDYMD 299
Query: 299 CLSYVRQGAALSVIWGHVSEGVAHAAKEDLIVIKDELCNNQMKRWQAIGTLKHVLFFVNL 358
CLS+++ G ALSVIWGHVSE VAHAAKED+ V+KDEL NNQ+KRWQAIGTLKHVL FV+L
Sbjct: 300 CLSHIKHGCALSVIWGHVSEEVAHAAKEDMTVVKDELRNNQIKRWQAIGTLKHVLSFVSL 359
Query: 359 PWELKKHTIDFLLSITDGSISRKCNNEHSELLSYMPNVFSALQAVKMVIMHAPDPEVRKK 418
PWELKKHTI+FLL ITDG I C++E S+ SYMPN+FSALQAVKMVIM+ PDPE RK
Sbjct: 360 PWELKKHTINFLLCITDGDIRGNCDDEQSQWSSYMPNLFSALQAVKMVIMYTPDPEHRKN 419
Query: 419 SFAVLKGVLADIPISQRFDILKALIANTDSSSMIAILIDLVRREMHTEICSRTSAVKNVA 478
SFAVLKGVLADIPISQR DIL ALI NTDSSSMIAIL+DLVRREMHTEI S TS VK+V
Sbjct: 420 SFAVLKGVLADIPISQRLDILIALITNTDSSSMIAILVDLVRREMHTEISSSTSVVKDVQ 479
Query: 479 PINNKVHPNISFWNPSVLELVELVLRPSQGGPPPLPEQSDAVLSALNLYRFVLMTESSGK 538
H +ISFW PSVLELVE +LRP QGGPP LPEQSDAVLSALNLYRFV+MTES+GK
Sbjct: 480 ------HIDISFWTPSVLELVESILRPPQGGPPSLPEQSDAVLSALNLYRFVIMTESTGK 533
Query: 539 TNCTGVLSRNTLLKAFNEWLLPLRTLVTGILAENKNDYDQLAVDTLCTINPLELVLYRCI 598
TN TGVLSR++L K +NEWLLPLRTLVTGI+ ENK+DYD+LA+DTLCT+NPLELVLYRCI
Sbjct: 534 TNYTGVLSRSSLNKVYNEWLLPLRTLVTGIMVENKSDYDELAIDTLCTLNPLELVLYRCI 593
Query: 599 ELVEDKIKEAT 609
ELVE+K+K+ T
Sbjct: 594 ELVEEKLKQVT 604
>Medtr4g014840.2 | aberrant root formation protein | HC |
chr4:4243000-4250375 | 20130731
Length = 604
Score = 877 bits (2266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/611 (71%), Positives = 501/611 (81%), Gaps = 9/611 (1%)
Query: 1 MSVAVEGEAVSFQASEARNDVRRILESYSKLAEAGDFNDSENTILELVKFLDSLSDTTLS 60
MS+++E E SF SEA +++RIL S KL E GD ++ ENT ELV FLDSL D S
Sbjct: 1 MSISLESETASFLGSEAHTNLQRILRSCPKLDEVGDSHEYENTFSELVNFLDSLLDAAFS 60
Query: 61 EPDDERAENNAYGALFEIHRYISSPSLHQEVVDALSFELPKAVSKFGSISSRLLDMAISI 120
+P +E EN+A+ AL EIHRYI SPSL QEVVDALSFE+PKAVSKF ISS+ DMAISI
Sbjct: 61 DPYNEHKENDAFEALSEIHRYICSPSLDQEVVDALSFEVPKAVSKFAGISSKFSDMAISI 120
Query: 121 IDQLIVKCGPRDMLSILCNTLGYSSKMTKPACYIVSPLSGLSKVFISIQRRQFEQVKEAV 180
IDQ I KCGPRDMLSILC+TLGYSSK+T A YIV PLSG+SKV ISI+RRQF+QVKE +
Sbjct: 121 IDQFIAKCGPRDMLSILCDTLGYSSKVTNAASYIVPPLSGISKVLISIRRRQFQQVKETI 180
Query: 181 PMILNVLKTVXXXXXXXXXXXVFVKAVEIAKSIHEVCDKL--ESVKKEKLQELLGLYVLQ 238
P+ILNVLK V VF +AVEIA SI+EVCDKL E +EK + LLGLYVLQ
Sbjct: 181 PIILNVLKAVSLKSDEELDN-VFDRAVEIANSIYEVCDKLVDEDAAREKFRSLLGLYVLQ 239
Query: 239 CMALVSTSISYKAAICDSLVLQLSQISSYCGLSYLFLLTTYDVETVASSVFGDDKDDCMG 298
C+ALVS +SY A+ C SLVLQLS+ISSYCGLSYL L+TTYDVE VAS+VFG++KDD M
Sbjct: 240 CLALVSAGVSYTASSCHSLVLQLSRISSYCGLSYLSLVTTYDVEVVASAVFGENKDDYMD 299
Query: 299 CLSYVRQGAALSVIWGHVSEGVAHAAKEDLIVIKDELCNNQMKRWQAIGTLKHVLFFVNL 358
CLS+++ G ALSVIWGHVSE VAHAAKED+ V+KDEL NNQ+KRWQAIGTLKHVL FV+L
Sbjct: 300 CLSHIKHGCALSVIWGHVSEEVAHAAKEDMTVVKDELRNNQIKRWQAIGTLKHVLSFVSL 359
Query: 359 PWELKKHTIDFLLSITDGSISRKCNNEHSELLSYMPNVFSALQAVKMVIMHAPDPEVRKK 418
PWELKKHTI+FLL ITDG I C++E S+ SYMPN+FSALQAVKMVIM+ PDPE RK
Sbjct: 360 PWELKKHTINFLLCITDGDIRGNCDDEQSQWSSYMPNLFSALQAVKMVIMYTPDPEHRKN 419
Query: 419 SFAVLKGVLADIPISQRFDILKALIANTDSSSMIAILIDLVRREMHTEICSRTSAVKNVA 478
SFAVLKGVLADIPISQR DIL ALI NTDSSSMIAIL+DLVRREMHTEI S TS VK+V
Sbjct: 420 SFAVLKGVLADIPISQRLDILIALITNTDSSSMIAILVDLVRREMHTEISSSTSVVKDVQ 479
Query: 479 PINNKVHPNISFWNPSVLELVELVLRPSQGGPPPLPEQSDAVLSALNLYRFVLMTESSGK 538
H +ISFW PSVLELVE +LRP QGGPP LPEQSDAVLSALNLYRFV+MTES+GK
Sbjct: 480 ------HIDISFWTPSVLELVESILRPPQGGPPSLPEQSDAVLSALNLYRFVIMTESTGK 533
Query: 539 TNCTGVLSRNTLLKAFNEWLLPLRTLVTGILAENKNDYDQLAVDTLCTINPLELVLYRCI 598
TN TGVLSR++L K +NEWLLPLRTLVTGI+ ENK+DYD+LA+DTLCT+NPLELVLYRCI
Sbjct: 534 TNYTGVLSRSSLNKVYNEWLLPLRTLVTGIMVENKSDYDELAIDTLCTLNPLELVLYRCI 593
Query: 599 ELVEDKIKEAT 609
ELVE+K+K+ T
Sbjct: 594 ELVEEKLKQVT 604
>Medtr1g013030.1 | aberrant root formation protein | HC |
chr1:2798487-2801061 | 20130731
Length = 332
Score = 468 bits (1204), Expect = e-132, Method: Compositional matrix adjust.
Identities = 236/337 (70%), Positives = 269/337 (79%), Gaps = 30/337 (8%)
Query: 273 LFLLTTYDVETVASSVFGDDKDDCMGCLSYVRQGAALSVIWGHVSEGVAHAAKEDLIVIK 332
L L+TTYDVE VAS+VFG++KDD M CLS+++ G ALSVI GHVSE VAHAAKED+ V+K
Sbjct: 26 LVLVTTYDVEVVASAVFGENKDDYMDCLSHIKHGCALSVICGHVSEEVAHAAKEDMTVVK 85
Query: 333 DELCNNQMKRWQAIGTLKHVLFFVNLPWELKKHTIDFLLSITDGSISRKCNNEHSELLSY 392
DEL NNQ+KR QAIGTLKHVL FV+LPWELKKHTI+FLL ITDG I C++E S+ SY
Sbjct: 86 DELRNNQIKRSQAIGTLKHVLSFVSLPWELKKHTINFLLCITDGDIHGNCDDEQSQWSSY 145
Query: 393 MPNVFSALQAVKMVIMHAPDPEVRKKSFAVLKGVLADIPISQRFDILKALIANTDSSSMI 452
MPN+FSALQ VLADIPISQ DIL ALI NTDSSSMI
Sbjct: 146 MPNLFSALQ------------------------VLADIPISQSLDILIALITNTDSSSMI 181
Query: 453 AILIDLVRREMHTEICSRTSAVKNVAPINNKVHPNISFWNPSVLELVELVLRPSQGGPPP 512
AIL+DLVRREMHTEI S TS VK+V H +ISFW PSVLELVE +LRP QGGPP
Sbjct: 182 AILVDLVRREMHTEISSSTSVVKDVQ------HIDISFWTPSVLELVESILRPPQGGPPS 235
Query: 513 LPEQSDAVLSALNLYRFVLMTESSGKTNCTGVLSRNTLLKAFNEWLLPLRTLVTGILAEN 572
LPEQSDAVLSALNLYRFV+MTES+GKTN TGVLSR++L K +NEWLLPLRTLVTGI+ EN
Sbjct: 236 LPEQSDAVLSALNLYRFVIMTESTGKTNYTGVLSRSSLNKVYNEWLLPLRTLVTGIMEEN 295
Query: 573 KNDYDQLAVDTLCTINPLELVLYRCIELVEDKIKEAT 609
K+DYD+LA+DTLCT+NPLELVLYRCIELVE+K+K+ T
Sbjct: 296 KSDYDELAIDTLCTLNPLELVLYRCIELVEEKLKQVT 332
>Medtr1g012280.1 | aberrant root formation protein, putative | LC |
chr1:2402683-2401628 | 20130731
Length = 171
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 163 KVFISIQRRQFEQVKEAVPMILNVLKTVXXXXXXXXXXXVFVKAVEIAKSIHEVCDKL-E 221
+V IS Q RQFEQV+ VP ILN LK V VF + VEI+ SI+EVC KL +
Sbjct: 15 EVLISTQMRQFEQVRAVVPSILNSLKVVHLETDKAIDD-VFDRTVEISNSIYEVCSKLVD 73
Query: 222 SVKKEKLQELLGLYVLQCMALVSTSISYKAAICDSLVLQLSQISSYCGLSYLFLLTTYDV 281
+V +EKL+ +L LYVLQC+AL+S Y SLVLQLS+IS CGLSYL L+TTYDV
Sbjct: 74 NVAREKLRAVLDLYVLQCLALLSGINIYDVPSYHSLVLQLSRISLNCGLSYLSLVTTYDV 133
Query: 282 ETVASSVFG 290
E V S+VFG
Sbjct: 134 EAVVSTVFG 142
>Medtr1g012260.1 | aberrant root formation protein, putative | LC |
chr1:2393767-2392835 | 20130731
Length = 104
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%), Gaps = 8/74 (10%)
Query: 536 SGKTNCTGVLSRNTLLKAFNEWLLPLRTLVTGILAENKNDYDQLAVDTLCTINPLELVLY 595
+GKTN TGVLSR++LLK +NEWLLPL+T VTGI+ +NK+ +C ++PLE+VL
Sbjct: 39 TGKTNYTGVLSRSSLLKVYNEWLLPLQTRVTGIMTDNKS--------FICDLSPLEMVLS 90
Query: 596 RCIELVEDKIKEAT 609
RCIELVE+K+ + T
Sbjct: 91 RCIELVEEKLNQIT 104
>Medtr1g013010.1 | hypothetical protein | HC | chr1:2789761-2790509
| 20130731
Length = 81
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 48/66 (72%)
Query: 98 ELPKAVSKFGSISSRLLDMAISIIDQLIVKCGPRDMLSILCNTLGYSSKMTKPACYIVSP 157
ELPKAVSKF ISS LDMAISIIDQ IVKCGP ML +LC TLG +SK A I+ P
Sbjct: 2 ELPKAVSKFAGISSSSLDMAISIIDQFIVKCGPEYMLFVLCYTLGEASKAISAAACIIPP 61
Query: 158 LSGLSK 163
LS +SK
Sbjct: 62 LSEISK 67
>Medtr1g012290.1 | hypothetical protein | LC | chr1:2403799-2403119
| 20130731
Length = 54
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 5/55 (9%)
Query: 116 MAISIIDQLIVKCGPRDMLSILCNTLGYSSKMTKPACYIVSPLSGLSKVFISIQR 170
MAISIIDQ I KCGP+ ML ILC TLG++S + +PA PL+ LS ++ QR
Sbjct: 1 MAISIIDQFIAKCGPKLMLFILCYTLGHASNLRRPAL----PLT-LSLLYQGSQR 50
>Medtr1g012330.1 | hypothetical protein | LC | chr1:2418533-2416779
| 20130731
Length = 255
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 39 DSENTILELVKFLDSLSDTTLSEPDDERAENNAYGALFEIHRYISSPSLHQ 89
+SEN I ELVKFLDS S LS+P +E E +A AL EIHRYI SPSL Q
Sbjct: 170 ESENLISELVKFLDSSSVAALSDPYNEHKEVSAVEALSEIHRYI-SPSLDQ 219