Miyakogusa Predicted Gene

Lj5g3v0526500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0526500.1 tr|G7JD84|G7JD84_MEDTR Mitochondrial acidic
protein MAM33 OS=Medicago truncatula GN=MTR_4g006560
PE=,40.57,3e-19,Mitochondrial glycoprotein MAM33-like,Mitochondrial
glycoprotein; COMPLEMENT COMPONENT 1-RELATED,NUL,gene.g59058.t1.1
         (120 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g013120.1 | glycoprotein family protein | HC | chr1:285829...   177   3e-45
Medtr4g006560.1 | glycoprotein family protein | HC | chr4:678633...    99   7e-22
Medtr5g080880.1 | glycoprotein family protein | HC | chr5:346392...    69   1e-12
Medtr5g093000.1 | glycoprotein family protein | HC | chr5:406019...    55   2e-08
Medtr7g063520.1 | glycoprotein family protein | HC | chr7:231645...    52   9e-08
Medtr5g080870.1 | glycoprotein family protein | LC | chr5:346336...    48   2e-06

>Medtr1g013120.1 | glycoprotein family protein | HC |
           chr1:2858294-2861439 | 20130731
          Length = 233

 Score =  177 bits (448), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 80/117 (68%), Positives = 98/117 (83%)

Query: 1   MFDWYEHITGPGYDSSGADVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRR 60
           MFD +EH+   G DSSG +VRLH SL+VDISKGE G+ELEFVCSAWP  L+V+KVF+L+R
Sbjct: 108 MFDGFEHVPAYGDDSSGVNVRLHLSLIVDISKGEGGNELEFVCSAWPDSLDVQKVFMLKR 167

Query: 61  GHMPARPFLGPNFRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           G M  RP+LGP+FR+L PK++EKF EYLD RGVN+ L+AFLH+YM+ KDRIE LRWM
Sbjct: 168 GKMSTRPYLGPDFRNLKPKIREKFCEYLDARGVNNELSAFLHEYMMNKDRIELLRWM 224


>Medtr4g006560.1 | glycoprotein family protein | HC |
           chr4:678633-682789 | 20130731
          Length = 237

 Score = 99.4 bits (246), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 72/106 (67%), Gaps = 1/106 (0%)

Query: 12  GYDSSGADVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPARPFLGP 71
           G  ++  +V+LH +L+V+ISK EDG  LE +CSAWP  + ++++ +    +M A P+ GP
Sbjct: 123 GGVANADEVQLHITLIVNISK-EDGDVLEIMCSAWPDSIVIKRLLVRANKNMTAEPYAGP 181

Query: 72  NFRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           +F +L+ ++Q+    +L+ RG+ND LA +LH YM +KD+ E + WM
Sbjct: 182 DFEELDDELQDSLYNFLEVRGINDELAKYLHQYMKHKDKTEIIGWM 227


>Medtr5g080880.1 | glycoprotein family protein | HC |
           chr5:34639263-34644206 | 20130731
          Length = 331

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 2/93 (2%)

Query: 26  LLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPAR-PFLGPNFRDLNPKVQEKF 84
           L V +SK +DG  LEF C A+P  + ++ + +        + P+ GP+F+DL+  +Q+ F
Sbjct: 155 LSVSVSK-KDGPSLEFSCVAYPDEIVIDSLSVKNPDFSDEQIPYDGPDFQDLDEALQKSF 213

Query: 85  REYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
            +YL+ RG+  +   FLH+YM+ KD  E+L W+
Sbjct: 214 HKYLEIRGIKPSTTNFLHEYMINKDSREYLVWL 246


>Medtr5g093000.1 | glycoprotein family protein | HC |
           chr5:40601916-40605994 | 20130731
          Length = 221

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 16/100 (16%)

Query: 28  VDISKGEDGSELEFVCSAWPKCLNVEKV-----------FILRRGHMPARPFLGPNFRDL 76
           VD+SK E    L F+C  +   L +  V           +IL   H     + GP F +L
Sbjct: 110 VDVSKPEQKESLNFLCGLYEDALGIHSVSMRPKLLDSSGYILTPTH-----YTGPVFAEL 164

Query: 77  NPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRW 116
           + K+++ F  Y++ RGVND+L  FL  ++  K+    +RW
Sbjct: 165 DEKMRDAFHSYIEERGVNDSLFKFLQAWLYVKEHRNLMRW 204


>Medtr7g063520.1 | glycoprotein family protein | HC |
           chr7:23164570-23167810 | 20130731
          Length = 254

 Score = 52.4 bits (124), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 19  DVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPARP-FLGPNFRDLN 77
           D      L+V + KG +G  +EF  +A+P  + ++ + I        +  + GP F DL+
Sbjct: 147 DSESSIPLVVTVFKG-NGVCMEFGVTAFPDEVVIDSLSIKNPDESEDQLLYEGPEFTDLD 205

Query: 78  PKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
             +Q+ F +YL+ RG+      FL +YM  KD  E+L W+
Sbjct: 206 ENLQKAFLKYLEIRGITPNTTNFLQEYMFNKDNKEYLGWL 245


>Medtr5g080870.1 | glycoprotein family protein | LC |
           chr5:34633631-34637278 | 20130731
          Length = 337

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 16/113 (14%)

Query: 8   ITGPGYDSSGADVRLHFSLL---VDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMP 64
           +TG  +D      R   S +   V +SK ++G+ LEF C A+P  +    +FI  RG   
Sbjct: 112 VTGEEHDKDDESERATQSSIDFSVSVSK-KNGTSLEFCCDAYPDEMVFSGLFITNRGEQ- 169

Query: 65  ARPFLGPNFRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
                 P +  L+      F+ YL+ RG+  +   FL +YM+ +   E+L W+
Sbjct: 170 -----IPYYDRLD------FQYYLEIRGIKPSTTNFLQEYMIKRKSREYLVWL 211