Miyakogusa Predicted Gene

Lj5g3v0526490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0526490.1 Non Characterized Hit- tr|I3SR78|I3SR78_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,31.36,4e-19,MAM33,Mitochondrial glycoprotein; seg,NULL;
Mitochondrial glycoprotein MAM33-like,Mitochondrial glyc,CUFF.53151.1
         (236 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g013120.1 | glycoprotein family protein | HC | chr1:285829...   342   1e-94
Medtr4g006560.1 | glycoprotein family protein | HC | chr4:678633...   169   2e-42
Medtr7g063520.1 | glycoprotein family protein | HC | chr7:231645...    96   3e-20
Medtr5g080880.1 | glycoprotein family protein | HC | chr5:346392...    89   3e-18
Medtr5g080870.1 | glycoprotein family protein | LC | chr5:346336...    70   3e-12
Medtr5g093000.1 | glycoprotein family protein | HC | chr5:406019...    70   3e-12
Medtr3g007690.1 | 50S ribosomal protein L5P | HC | chr3:1122156-...    58   8e-09

>Medtr1g013120.1 | glycoprotein family protein | HC |
           chr1:2858294-2861439 | 20130731
          Length = 233

 Score =  342 bits (878), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 160/236 (67%), Positives = 194/236 (82%), Gaps = 3/236 (1%)

Query: 1   MASLIRVVRKKIXXXXXXXXWAVARTLRVRNGTLGFASRGYAEVAAVKSPFESNILRVLR 60
           M+ LIR +++          ++  R   V + TLGF++  +   +  KSPFESNILR+LR
Sbjct: 1   MSVLIRTIQR---AHRLKQTFSSPRISNVLSQTLGFSNSAHVAESVTKSPFESNILRILR 57

Query: 61  NEIEYQAEYAPPHQPETKFNSYTVEERPGEQVITLKGRFGDREDIKIEATMFDGYEHITV 120
           NEIEYQAEYAPPHQP  +F S+ VEERPGEQV+TLKG+FGD EDIKIEATMFDG+EH+  
Sbjct: 58  NEIEYQAEYAPPHQPVKEFKSFIVEERPGEQVVTLKGKFGDNEDIKIEATMFDGFEHVPA 117

Query: 121 PGDDSSGADVRLHLSLLVDISKGEGGSELEFVCSAWPDCLDVEKVYILRRGHMPTRPFLG 180
            GDDSSG +VRLHLSL+VDISKGEGG+ELEFVCSAWPD LDV+KV++L+RG M TRP+LG
Sbjct: 118 YGDDSSGVNVRLHLSLIVDISKGEGGNELEFVCSAWPDSLDVQKVFMLKRGKMSTRPYLG 177

Query: 181 PNFRDLNPKVQEKFREYLDTRGVNDELAAFLHDYMLNKDRIELLRWMDSLKSFVEK 236
           P+FR+L PK++EKF EYLD RGVN+EL+AFLH+YM+NKDRIELLRWMD LKSFVEK
Sbjct: 178 PDFRNLKPKIREKFCEYLDARGVNNELSAFLHEYMMNKDRIELLRWMDRLKSFVEK 233


>Medtr4g006560.1 | glycoprotein family protein | HC |
           chr4:678633-682789 | 20130731
          Length = 237

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 85/195 (43%), Positives = 130/195 (66%), Gaps = 12/195 (6%)

Query: 48  KSPFESNILRVLRNEIEYQAEYAPPHQPET-KFNSYTVEERPGEQVITLKGRFGDREDIK 106
           K  FE NI R+LRNEI+Y+ + +    P   KF S+ V+ RPGE+ ITLK +F + E+IK
Sbjct: 48  KEAFEGNISRLLRNEIQYELQSSSSSNPPADKFGSFLVDGRPGERWITLKRQFAN-ENIK 106

Query: 107 IEATMFDGYEHITVPGDDSSGA-----DVRLHLSLLVDISKGEGGSELEFVCSAWPDCLD 161
           +E TMFDG     VP    SG      +V+LH++L+V+ISK E G  LE +CSAWPD + 
Sbjct: 107 VEVTMFDG----AVPAPKKSGGVANADEVQLHITLIVNISK-EDGDVLEIMCSAWPDSIV 161

Query: 162 VEKVYILRRGHMPTRPFLGPNFRDLNPKVQEKFREYLDTRGVNDELAAFLHDYMLNKDRI 221
           ++++ +    +M   P+ GP+F +L+ ++Q+    +L+ RG+NDELA +LH YM +KD+ 
Sbjct: 162 IKRLLVRANKNMTAEPYAGPDFEELDDELQDSLYNFLEVRGINDELAKYLHQYMKHKDKT 221

Query: 222 ELLRWMDSLKSFVEK 236
           E++ WM+ +KS++EK
Sbjct: 222 EIIGWMEKVKSYIEK 236


>Medtr7g063520.1 | glycoprotein family protein | HC |
           chr7:23164570-23167810 | 20130731
          Length = 254

 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 9/223 (4%)

Query: 22  AVARTLRVRNGTLGFA-SRGYAEVAAVKSPFESNILRVLRNEIEYQAEYAPPHQPETKFN 80
           A+A  L  +N T  F  SR +A     K+P +  +LRVL +EI+   E         +F 
Sbjct: 33  AIAVNLLRQNETTHFVPSRSFAYGVLAKTPADDTLLRVLNSEIDCALEDNDSLSANLEFP 92

Query: 81  S---YTVEERPGEQVITLKGRFGDRE---DIKIEATMFDGYEHITVPGDDSSGADVRLHL 134
               + VE+ PGE+ I LK +F D      + I        E    P    +  D    +
Sbjct: 93  GDFPFEVEDNPGERTIQLKRQFEDETITVQVDIPNVAPQQSEDEADPEKIENENDSESSI 152

Query: 135 SLLVDISKGEGGSELEFVCSAWPDCLDVEKVYILRRGHMPTRP-FLGPNFRDLNPKVQEK 193
            L+V + KG G   +EF  +A+PD + ++ + I        +  + GP F DL+  +Q+ 
Sbjct: 153 PLVVTVFKGNGVC-MEFGVTAFPDEVVIDSLSIKNPDESEDQLLYEGPEFTDLDENLQKA 211

Query: 194 FREYLDTRGVNDELAAFLHDYMLNKDRIELLRWMDSLKSFVEK 236
           F +YL+ RG+      FL +YM NKD  E L W+  LKSF+EK
Sbjct: 212 FLKYLEIRGITPNTTNFLQEYMFNKDNKEYLGWLKKLKSFIEK 254


>Medtr5g080880.1 | glycoprotein family protein | HC |
           chr5:34639263-34644206 | 20130731
          Length = 331

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 91/160 (56%), Gaps = 8/160 (5%)

Query: 82  YTVEERPGEQVITLKGRFGDREDIKIEATMFD---GYEHITVPGDDSSGAD--VRLHLSL 136
           + + + PG Q ITLK R    E+I++E  M D   G EH     D    ++   +  + L
Sbjct: 97  FKIVDNPGNQTITLK-RTYQGEEIQVEVHMPDLVTGEEHDHQDDDKDDESERATQSSIPL 155

Query: 137 LVDISKGEGGSELEFVCSAWPDCLDVEKVYILRRGHMPTR-PFLGPNFRDLNPKVQEKFR 195
            V +SK +G S LEF C A+PD + ++ + +        + P+ GP+F+DL+  +Q+ F 
Sbjct: 156 SVSVSKKDGPS-LEFSCVAYPDEIVIDSLSVKNPDFSDEQIPYDGPDFQDLDEALQKSFH 214

Query: 196 EYLDTRGVNDELAAFLHDYMLNKDRIELLRWMDSLKSFVE 235
           +YL+ RG+      FLH+YM+NKD  E L W++ LK+F++
Sbjct: 215 KYLEIRGIKPSTTNFLHEYMINKDSREYLVWLNKLKNFIK 254


>Medtr5g080870.1 | glycoprotein family protein | LC |
           chr5:34633631-34637278 | 20130731
          Length = 337

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 24/174 (13%)

Query: 64  EYQAEYAPPHQPETKFNSYTVEERPGEQVITLKGRF-GDREDIKIEAT-MFDGYEHITVP 121
           E++ E  P + P      + + E P  Q I LK  + G++ ++K+    +  G EH    
Sbjct: 68  EFRGEEVPSNFP------FKIVENPRNQTIILKRTYQGEKIEVKVHMVDLVTGEEH---D 118

Query: 122 GDDSSGADVRLHLSLLVDISKGEGGSELEFVCSAWPDCLDVEKVYILRRGHMPTRPFLGP 181
            DD S    +  +   V +SK  G S LEF C A+PD +    ++I  RG         P
Sbjct: 119 KDDESERATQSSIDFSVSVSKKNGTS-LEFCCDAYPDEMVFSGLFITNRGEQ------IP 171

Query: 182 NFRDLNPKVQEKFREYLDTRGVNDELAAFLHDYMLNKDRIELLRWMDSLKSFVE 235
            +  L+      F+ YL+ RG+      FL +YM+ +   E L W++ LK+F++
Sbjct: 172 YYDRLD------FQYYLEIRGIKPSTTNFLQEYMIKRKSREYLVWLNKLKNFIK 219


>Medtr5g093000.1 | glycoprotein family protein | HC |
           chr5:40601916-40605994 | 20130731
          Length = 221

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 25/207 (12%)

Query: 40  GYAEVAAVKSPFESNILRVLRNEIEYQAEYAPPHQPETKFNSYTVEERPGEQVITLKGRF 99
           G    A + S  ++ +LR L+      A+   P +     N   V+     +   LK  +
Sbjct: 21  GVRGAATMSSAVDTMVLRSLKEHYMEVAKMNMPPKVSPPSNFTIVKGALDSEGPVLKRNY 80

Query: 100 GDREDIKIEATMFDGYEHITVPGDDSSGADVRLHLSLLVDISKGEGGSELEFVCSAWPDC 159
           G+ E+I I     +        G++  GA  +L +   VD+SK E    L F+C  + D 
Sbjct: 81  GE-EEISIYVMRLNNI------GEEQDGAIDQLFIH--VDVSKPEQKESLNFLCGLYEDA 131

Query: 160 LDVEKV-----------YILRRGHMPTRPFLGPNFRDLNPKVQEKFREYLDTRGVNDELA 208
           L +  V           YIL   H     + GP F +L+ K+++ F  Y++ RGVND L 
Sbjct: 132 LGIHSVSMRPKLLDSSGYILTPTH-----YTGPVFAELDEKMRDAFHSYIEERGVNDSLF 186

Query: 209 AFLHDYMLNKDRIELLRWMDSLKSFVE 235
            FL  ++  K+   L+RW  ++  F++
Sbjct: 187 KFLQAWLYVKEHRNLMRWFKTMGLFID 213


>Medtr3g007690.1 | 50S ribosomal protein L5P | HC |
          chr3:1122156-1120010 | 20130731
          Length = 241

 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 22 AVARTLRVRNGTLGFA-SRGYAEVAAVKSPFESNILRVLRNEIEYQAEYAPPHQPETK 78
           + R   V + TLGF+ +  Y   +  KSPFESNILR++RNE+E+ A+ APPHQ   K
Sbjct: 7  TIQRAHNVLSQTLGFSNTSSYIAESVTKSPFESNILRIIRNEMEFLADIAPPHQAYEK 64