Miyakogusa Predicted Gene

Lj5g3v0526300.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0526300.1 tr|I0Z9S1|I0Z9S1_9CHLO Abi-domain-containing
protein OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,50.59,1e-17,Abi,CAAX amino terminal
protease,NODE_58224_length_436_cov_80.782112.path2.1
         (86 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g467540.2 | CAAX amino terminal protease family protein | ...   158   1e-39
Medtr8g467540.1 | CAAX amino terminal protease family protein | ...   158   1e-39
Medtr8g467540.3 | CAAX amino terminal protease family protein | ...    77   5e-15
Medtr8g099085.1 | CAAX amino terminal protease family protein | ...    53   8e-08
Medtr1g099420.1 | CAAX amino terminal protease family protein | ...    48   2e-06

>Medtr8g467540.2 | CAAX amino terminal protease family protein | HC
           | chr8:24295728-24287936 | 20130731
          Length = 338

 Score =  158 bits (399), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/84 (91%), Positives = 81/84 (96%)

Query: 1   MTSLTKWVPTPVAIIISSAVFALAHLTPGEFPQLFVLGTALGVSYAQTHNLLTPITIHAF 60
           MTSLTKWVPTPVAII+S+AVFALAHLTPGEFPQLFVLG+ALG+SYAQT NLLTPITIHAF
Sbjct: 254 MTSLTKWVPTPVAIILSAAVFALAHLTPGEFPQLFVLGSALGISYAQTRNLLTPITIHAF 313

Query: 61  WNSGVILFLTFLQLQGYDIKELLQ 84
           WNSGVIL LT LQLQGYDIKELLQ
Sbjct: 314 WNSGVILLLTVLQLQGYDIKELLQ 337


>Medtr8g467540.1 | CAAX amino terminal protease family protein | HC
           | chr8:24295707-24281408 | 20130731
          Length = 338

 Score =  158 bits (399), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/84 (91%), Positives = 81/84 (96%)

Query: 1   MTSLTKWVPTPVAIIISSAVFALAHLTPGEFPQLFVLGTALGVSYAQTHNLLTPITIHAF 60
           MTSLTKWVPTPVAII+S+AVFALAHLTPGEFPQLFVLG+ALG+SYAQT NLLTPITIHAF
Sbjct: 254 MTSLTKWVPTPVAIILSAAVFALAHLTPGEFPQLFVLGSALGISYAQTRNLLTPITIHAF 313

Query: 61  WNSGVILFLTFLQLQGYDIKELLQ 84
           WNSGVIL LT LQLQGYDIKELLQ
Sbjct: 314 WNSGVILLLTVLQLQGYDIKELLQ 337


>Medtr8g467540.3 | CAAX amino terminal protease family protein | HC
           | chr8:24295730-24289349 | 20130731
          Length = 293

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 36/40 (90%), Positives = 38/40 (95%)

Query: 1   MTSLTKWVPTPVAIIISSAVFALAHLTPGEFPQLFVLGTA 40
           MTSLTKWVPTPVAII+S+AVFALAHLTPGEFPQLFVLG  
Sbjct: 254 MTSLTKWVPTPVAIILSAAVFALAHLTPGEFPQLFVLGRC 293


>Medtr8g099085.1 | CAAX amino terminal protease family protein | HC
           | chr8:41607888-41603432 | 20130731
          Length = 343

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 40/69 (57%)

Query: 1   MTSLTKWVPTPVAIIISSAVFALAHLTPGEFPQLFVLGTALGVSYAQTHNLLTPITIHAF 60
           + SLTK++P   AI++SS  FALAH        L  LG  +GV + ++ NLL  + +H+ 
Sbjct: 273 LPSLTKYMPVWCAILVSSVAFALAHFNIQRMLPLIFLGMVMGVIFTRSRNLLPSMLLHSL 332

Query: 61  WNSGVILFL 69
           WN  V L L
Sbjct: 333 WNGFVFLDL 341


>Medtr1g099420.1 | CAAX amino terminal protease family protein | HC
           | chr1:44897057-44901183 | 20130731
          Length = 342

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 1   MTSLTKWVPTPVAIIISSAVFALAHLTPGEFPQLFVLGTALGVSYAQTHNLLTPITIHAF 60
           + SLT+++P   A+++SS  FA AH        L  LG  +G  + ++ NLL  + +H+ 
Sbjct: 272 LPSLTRYMPVWSAVLVSSVAFAFAHFNIQRMLPLVFLGMVMGAVFVRSRNLLPSMLLHSL 331

Query: 61  WNSGVILFL 69
           WN+ V L L
Sbjct: 332 WNAFVFLDL 340