Miyakogusa Predicted Gene

Lj5g3v0495880.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0495880.3 Non Characterized Hit- tr|I3SNI5|I3SNI5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,88.37,0,CM_pl-yst: chorismate mutase,Chorismate mutase, AroQ
class, eukaryotic type; SUBFAMILY NOT NAMED,NUL,CUFF.53082.3
         (277 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g013820.3 | chorismate mutase | HC | chr1:3225457-3222059 ...   430   e-121
Medtr1g013820.1 | chorismate mutase | HC | chr1:3225818-3222063 ...   411   e-115
Medtr1g013820.2 | chorismate mutase | HC | chr1:3225818-3222312 ...   405   e-113
Medtr3g106000.1 | chorismate mutase | HC | chr3:48894811-4888544...   345   3e-95
Medtr5g043210.1 | chorismate mutase | HC | chr5:18985631-1898271...   266   1e-71
Medtr5g043210.2 | chorismate mutase | HC | chr5:18987443-1898271...   266   2e-71
Medtr6g013425.1 | chorismate mutase | HC | chr6:4250485-4244913 ...   258   5e-69
Medtr1g013860.1 | chorismate mutase | HC | chr1:3212643-3212028 ...    62   5e-10
Medtr1g013900.1 | chorismate mutase | HC | chr1:3203806-3203191 ...    62   5e-10
Medtr1g013940.1 | chorismate mutase | HC | chr1:3194988-3194373 ...    62   5e-10
Medtr1g013980.1 | chorismate mutase | HC | chr1:3186171-3185556 ...    62   5e-10

>Medtr1g013820.3 | chorismate mutase | HC | chr1:3225457-3222059 |
           20130731
          Length = 274

 Score =  430 bits (1105), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/277 (74%), Positives = 241/277 (87%), Gaps = 3/277 (1%)

Query: 1   MMIRFPFLVVLVLVISTVRYRMAKAESNDVYTLESVREDLVKQEDTIVFGLIDRARFPMN 60
           MMI+F  L++LVL +STV  +MA AE+   YTL++VRE LV+QEDTIVFGLI+R++FP N
Sbjct: 1   MMIKFK-LLILVLTMSTVINKMATAENE--YTLDTVRETLVRQEDTIVFGLIERSKFPFN 57

Query: 61  YHTYDENYWKIPGFCGSLVECVVQNTEAIQAMAGRYQNPEENAFFPEHLPSPIVPSYPFT 120
             TYD+NY +IPGFCGSLVE V  NTE +QA AGRY+NPEEN FFPE+L   +VPSYPFT
Sbjct: 58  SQTYDQNYLQIPGFCGSLVEFVFTNTEIVQAKAGRYKNPEENPFFPENLSLSLVPSYPFT 117

Query: 121 QILHPGAASININKSIWKNYFDELLPILVASGDDGNYAQTAASDLSLLQAISRRIHYGKF 180
           + LHPGAASININKS+WK YF +LLP+ VASGDDGNYAQTAASDLSLLQAIS+R+HYGKF
Sbjct: 118 KFLHPGAASININKSLWKMYFHDLLPLFVASGDDGNYAQTAASDLSLLQAISKRVHYGKF 177

Query: 181 VAEAKFRESPQDYEPLIRAKDTEGLMKLLTFESVQEMVIKRVEKKAMVFGQEVGLNSDDE 240
           VAE KFRESPQDYEPLIR+KD EGLMKLLTF+SV+EMV KRVEKKA +FGQ++ LNS D+
Sbjct: 178 VAEVKFRESPQDYEPLIRSKDKEGLMKLLTFKSVEEMVKKRVEKKATLFGQDISLNSSDD 237

Query: 241 KEVKRKFDPSVASSLYQKWIIPLTKEVEVEYLLRRLD 277
            + K+KFDPSVAS LY+KW+IPLTKEV+VEYLLRRLD
Sbjct: 238 SKGKQKFDPSVASKLYEKWVIPLTKEVQVEYLLRRLD 274


>Medtr1g013820.1 | chorismate mutase | HC | chr1:3225818-3222063 |
           20130731
          Length = 254

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 194/256 (75%), Positives = 225/256 (87%), Gaps = 2/256 (0%)

Query: 22  MAKAESNDVYTLESVREDLVKQEDTIVFGLIDRARFPMNYHTYDENYWKIPGFCGSLVEC 81
           MA AE+   YTL++VRE LV+QEDTIVFGLI+R++FP N  TYD+NY +IPGFCGSLVE 
Sbjct: 1   MATAENE--YTLDTVRETLVRQEDTIVFGLIERSKFPFNSQTYDQNYLQIPGFCGSLVEF 58

Query: 82  VVQNTEAIQAMAGRYQNPEENAFFPEHLPSPIVPSYPFTQILHPGAASININKSIWKNYF 141
           V  NTE +QA AGRY+NPEEN FFPE+L   +VPSYPFT+ LHPGAASININKS+WK YF
Sbjct: 59  VFTNTEIVQAKAGRYKNPEENPFFPENLSLSLVPSYPFTKFLHPGAASININKSLWKMYF 118

Query: 142 DELLPILVASGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEAKFRESPQDYEPLIRAKD 201
            +LLP+ VASGDDGNYAQTAASDLSLLQAIS+R+HYGKFVAE KFRESPQDYEPLIR+KD
Sbjct: 119 HDLLPLFVASGDDGNYAQTAASDLSLLQAISKRVHYGKFVAEVKFRESPQDYEPLIRSKD 178

Query: 202 TEGLMKLLTFESVQEMVIKRVEKKAMVFGQEVGLNSDDEKEVKRKFDPSVASSLYQKWII 261
            EGLMKLLTF+SV+EMV KRVEKKA +FGQ++ LNS D+ + K+KFDPSVAS LY+KW+I
Sbjct: 179 KEGLMKLLTFKSVEEMVKKRVEKKATLFGQDISLNSSDDSKGKQKFDPSVASKLYEKWVI 238

Query: 262 PLTKEVEVEYLLRRLD 277
           PLTKEV+VEYLLRRLD
Sbjct: 239 PLTKEVQVEYLLRRLD 254


>Medtr1g013820.2 | chorismate mutase | HC | chr1:3225818-3222312 |
           20130731
          Length = 252

 Score =  405 bits (1040), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/256 (75%), Positives = 224/256 (87%), Gaps = 4/256 (1%)

Query: 22  MAKAESNDVYTLESVREDLVKQEDTIVFGLIDRARFPMNYHTYDENYWKIPGFCGSLVEC 81
           MA AE+   YTL++VRE LV+QEDTIVFGLI+R++FP N  TYD+NY +IPGFCGSLVE 
Sbjct: 1   MATAENE--YTLDTVRETLVRQEDTIVFGLIERSKFPFNSQTYDQNYLQIPGFCGSLVEF 58

Query: 82  VVQNTEAIQAMAGRYQNPEENAFFPEHLPSPIVPSYPFTQILHPGAASININKSIWKNYF 141
           V  NTE +QA  GRY+NPEEN FFPE+L   +VPSYPFT+ LHPGAASININKS+WK YF
Sbjct: 59  VFTNTEIVQA--GRYKNPEENPFFPENLSLSLVPSYPFTKFLHPGAASININKSLWKMYF 116

Query: 142 DELLPILVASGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEAKFRESPQDYEPLIRAKD 201
            +LLP+ VASGDDGNYAQTAASDLSLLQAIS+R+HYGKFVAE KFRESPQDYEPLIR+KD
Sbjct: 117 HDLLPLFVASGDDGNYAQTAASDLSLLQAISKRVHYGKFVAEVKFRESPQDYEPLIRSKD 176

Query: 202 TEGLMKLLTFESVQEMVIKRVEKKAMVFGQEVGLNSDDEKEVKRKFDPSVASSLYQKWII 261
            EGLMKLLTF+SV+EMV KRVEKKA +FGQ++ LNS D+ + K+KFDPSVAS LY+KW+I
Sbjct: 177 KEGLMKLLTFKSVEEMVKKRVEKKATLFGQDISLNSSDDSKGKQKFDPSVASKLYEKWVI 236

Query: 262 PLTKEVEVEYLLRRLD 277
           PLTKEV+VEYLLRRLD
Sbjct: 237 PLTKEVQVEYLLRRLD 252


>Medtr3g106000.1 | chorismate mutase | HC | chr3:48894811-48885441 |
           20130731
          Length = 274

 Score =  345 bits (885), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 172/277 (62%), Positives = 217/277 (78%), Gaps = 4/277 (1%)

Query: 2   MIRFPFLVVLVLVIS-TVRYRMAKAESNDVYTLESVREDLVKQEDTIVFGLIDRARFPMN 60
           M++  F+ V+V+++S T R++     S + YT+ESVR  L++QEDTI+F +I+RARFP+N
Sbjct: 1   MMKLRFMAVVVMLLSCTERHKSTAKGSENEYTVESVRASLIRQEDTIIFSVIERARFPLN 60

Query: 61  YHTYDENYWKIPGFCGSLVECVVQNTEAIQAMAGRYQNPEENAFFPEHLPSPIVPSYPFT 120
             TY ++Y  IP F GSL++ V+  TEAIQA +GRY NPEEN +    LP  IVP Y F+
Sbjct: 61  SPTYHQHYASIPHFSGSLLDVVLDYTEAIQAKSGRYINPEENPY-KGILPPSIVPHYNFS 119

Query: 121 QILHPGAASININKSIWKNYFDELLPILVASGDDGNYAQTAASDLSLLQAISRRIHYGKF 180
           Q LH  A+SIN NK+I K YF E+LP+ VA GDDGNYAQTAASDLS+LQAISRRIHYGKF
Sbjct: 120 QFLHTAASSINTNKNIRKVYFHEMLPLFVAFGDDGNYAQTAASDLSILQAISRRIHYGKF 179

Query: 181 VAEAKFRESPQDYEPLIRAKDTEGLMKLLTFESVQEMVIKRVEKKAMVFGQEVGLNSDDE 240
           VAEAKFRESP+DYEPLIRAKD + L+KLLT ++V+E+V+KRVEKKAMVFGQEV L+ D +
Sbjct: 180 VAEAKFRESPRDYEPLIRAKDRKALLKLLTSKNVEEIVVKRVEKKAMVFGQEVSLDHDVK 239

Query: 241 KEVKRKFDPSVASSLYQKWIIPLTKEVEVEYLLRRLD 277
                K DP++ S LY+KWIIP+TK VE+EYLLRRLD
Sbjct: 240 GNY--KVDPAIVSRLYKKWIIPMTKNVELEYLLRRLD 274


>Medtr5g043210.1 | chorismate mutase | HC | chr5:18985631-18982718 |
           20130731
          Length = 263

 Score =  266 bits (681), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 132/247 (53%), Positives = 174/247 (70%), Gaps = 2/247 (0%)

Query: 32  TLESVREDLVKQEDTIVFGLIDRARFPMNYHTYDENYWKIPGFCGSLVECVVQNTEAIQA 91
           TL+ +R  L++QED+I+F L++RA++  N  TYD+ ++   GF GSLVE +V  TE + A
Sbjct: 18  TLDCIRHSLIRQEDSIIFNLLERAQYSYNADTYDKAFFS-DGFHGSLVEYMVHETEKLHA 76

Query: 92  MAGRYQNPEENAFFPEHLPSPIVPSYPFTQILHPGAASININKSIWKNYFDELLPILVAS 151
             GRY +P+E+AFFP +LP P++P   + Q+LH  A SIN+NK IW  YF ELLP LV +
Sbjct: 77  QVGRYTSPDEHAFFPTNLPEPLLPPMKYPQVLHHCANSINLNKMIWNMYFKELLPRLVKA 136

Query: 152 GDDGNYAQTAASDLSLLQAISRRIHYGKFVAEAKFRESPQDYEPLIRAKDTEGLMKLLTF 211
           GDDGN    A  D   LQA+S+RIHYGKFVAEAKF+E P  YE  I+AKD + L++LLT+
Sbjct: 137 GDDGNSGSAAVCDTLCLQALSKRIHYGKFVAEAKFQECPSVYEAAIKAKDRKRLLELLTY 196

Query: 212 ESVQEMVIKRVEKKAMVFGQEVGLN-SDDEKEVKRKFDPSVASSLYQKWIIPLTKEVEVE 270
           ESV+E V KRVE KA  F QEV +N + D  +   +    +  +LY KWI+PLTKEV+VE
Sbjct: 197 ESVEESVQKRVEMKARTFSQEVKINEAGDVADPVYRIKSGLIGNLYGKWIMPLTKEVQVE 256

Query: 271 YLLRRLD 277
           YLLRRLD
Sbjct: 257 YLLRRLD 263


>Medtr5g043210.2 | chorismate mutase | HC | chr5:18987443-18982718 |
           20130731
          Length = 318

 Score =  266 bits (679), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 132/247 (53%), Positives = 174/247 (70%), Gaps = 2/247 (0%)

Query: 32  TLESVREDLVKQEDTIVFGLIDRARFPMNYHTYDENYWKIPGFCGSLVECVVQNTEAIQA 91
           TL+ +R  L++QED+I+F L++RA++  N  TYD+ ++   GF GSLVE +V  TE + A
Sbjct: 73  TLDCIRHSLIRQEDSIIFNLLERAQYSYNADTYDKAFFS-DGFHGSLVEYMVHETEKLHA 131

Query: 92  MAGRYQNPEENAFFPEHLPSPIVPSYPFTQILHPGAASININKSIWKNYFDELLPILVAS 151
             GRY +P+E+AFFP +LP P++P   + Q+LH  A SIN+NK IW  YF ELLP LV +
Sbjct: 132 QVGRYTSPDEHAFFPTNLPEPLLPPMKYPQVLHHCANSINLNKMIWNMYFKELLPRLVKA 191

Query: 152 GDDGNYAQTAASDLSLLQAISRRIHYGKFVAEAKFRESPQDYEPLIRAKDTEGLMKLLTF 211
           GDDGN    A  D   LQA+S+RIHYGKFVAEAKF+E P  YE  I+AKD + L++LLT+
Sbjct: 192 GDDGNSGSAAVCDTLCLQALSKRIHYGKFVAEAKFQECPSVYEAAIKAKDRKRLLELLTY 251

Query: 212 ESVQEMVIKRVEKKAMVFGQEVGLN-SDDEKEVKRKFDPSVASSLYQKWIIPLTKEVEVE 270
           ESV+E V KRVE KA  F QEV +N + D  +   +    +  +LY KWI+PLTKEV+VE
Sbjct: 252 ESVEESVQKRVEMKARTFSQEVKINEAGDVADPVYRIKSGLIGNLYGKWIMPLTKEVQVE 311

Query: 271 YLLRRLD 277
           YLLRRLD
Sbjct: 312 YLLRRLD 318


>Medtr6g013425.1 | chorismate mutase | HC | chr6:4250485-4244913 |
           20130731
          Length = 316

 Score =  258 bits (658), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 124/247 (50%), Positives = 174/247 (70%), Gaps = 1/247 (0%)

Query: 32  TLESVREDLVKQEDTIVFGLIDRARFPMNYHTYDENYWKIPGFCGSLVECVVQNTEAIQA 91
           TL+ +R  L++QED+I++ L++RA++  N  TYD + + I GF GSLVE +V+ TE + A
Sbjct: 70  TLDHIRSSLIRQEDSIIYCLLERAQYCYNEDTYDPDTFSIDGFHGSLVEYMVRETEKLHA 129

Query: 92  MAGRYQNPEENAFFPEHLPSPIVPSYPFTQILHPGAASININKSIWKNYFDELLPILVAS 151
             GRY++P+E+ FFP  LP  ++P   + Q+LHP A SININ ++W  YF  L+P LV  
Sbjct: 130 KVGRYKSPDEHPFFPTGLPEQLLPPLQYPQVLHPIAESININDNVWSVYFRVLIPQLVKE 189

Query: 152 GDDGNYAQTAASDLSLLQAISRRIHYGKFVAEAKFRESPQDYEPLIRAKDTEGLMKLLTF 211
           GDDGNY  +A  D+  LQA+S+RIHYGKFVAEAKF+ +P  Y+  I A+D + LM+LLT+
Sbjct: 190 GDDGNYGSSAVCDVMCLQALSKRIHYGKFVAEAKFQAAPDSYKAAIIAQDKDRLMELLTY 249

Query: 212 ESVQEMVIKRVEKKAMVFGQEVGLNSDDEK-EVKRKFDPSVASSLYQKWIIPLTKEVEVE 270
             V+E + +RV  KA  +GQEV +N  D+K E   K +PS+ + LY  WI+PLTKEV+V 
Sbjct: 250 PEVEESIKRRVAVKAKTYGQEVAVNLKDQKTEPVYKINPSLVADLYSDWIMPLTKEVQVA 309

Query: 271 YLLRRLD 277
           YLLR+LD
Sbjct: 310 YLLRKLD 316


>Medtr1g013860.1 | chorismate mutase | HC | chr1:3212643-3212028 |
           20130731
          Length = 71

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 54/64 (84%)

Query: 200 KDTEGLMKLLTFESVQEMVIKRVEKKAMVFGQEVGLNSDDEKEVKRKFDPSVASSLYQKW 259
           +D EGLMKLLTF+SV+EMV KR++KK  +F Q++  +++D+ + K+KFDPS+AS+ Y+KW
Sbjct: 7   QDKEGLMKLLTFKSVEEMVKKRLKKKTTLFRQDINFDNNDDNKGKQKFDPSMASTFYEKW 66

Query: 260 IIPL 263
           +IPL
Sbjct: 67  VIPL 70


>Medtr1g013900.1 | chorismate mutase | HC | chr1:3203806-3203191 |
           20130731
          Length = 71

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 54/64 (84%)

Query: 200 KDTEGLMKLLTFESVQEMVIKRVEKKAMVFGQEVGLNSDDEKEVKRKFDPSVASSLYQKW 259
           +D EGLMKLLTF+SV+EMV KR++KK  +F Q++  +++D+ + K+KFDPS+AS+ Y+KW
Sbjct: 7   QDKEGLMKLLTFKSVEEMVKKRLKKKTTLFRQDINFDNNDDNKGKQKFDPSMASTFYEKW 66

Query: 260 IIPL 263
           +IPL
Sbjct: 67  VIPL 70


>Medtr1g013940.1 | chorismate mutase | HC | chr1:3194988-3194373 |
           20130731
          Length = 71

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 54/64 (84%)

Query: 200 KDTEGLMKLLTFESVQEMVIKRVEKKAMVFGQEVGLNSDDEKEVKRKFDPSVASSLYQKW 259
           +D EGLMKLLTF+SV+EMV KR++KK  +F Q++  +++D+ + K+KFDPS+AS+ Y+KW
Sbjct: 7   QDKEGLMKLLTFKSVEEMVKKRLKKKTTLFRQDINFDNNDDNKGKQKFDPSMASTFYEKW 66

Query: 260 IIPL 263
           +IPL
Sbjct: 67  VIPL 70


>Medtr1g013980.1 | chorismate mutase | HC | chr1:3186171-3185556 |
           20130731
          Length = 71

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 54/64 (84%)

Query: 200 KDTEGLMKLLTFESVQEMVIKRVEKKAMVFGQEVGLNSDDEKEVKRKFDPSVASSLYQKW 259
           +D EGLMKLLTF+SV+EMV KR++KK  +F Q++  +++D+ + K+KFDPS+AS+ Y+KW
Sbjct: 7   QDKEGLMKLLTFKSVEEMVKKRLKKKTTLFRQDINFDNNDDNKGKQKFDPSMASTFYEKW 66

Query: 260 IIPL 263
           +IPL
Sbjct: 67  VIPL 70