Miyakogusa Predicted Gene

Lj5g3v0469120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0469120.1 tr|H0K816|H0K816_9PSEU NADH dehydrogenase
OS=Saccharomonospora azurea SZMC 14600 GN=SZMC14600_16246
,34.25,0.7,seg,NULL,CUFF.53107.1
         (319 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g015010.1 | G-protein coupled receptor, putative | HC | ch...   530   e-151

>Medtr1g015010.1 | G-protein coupled receptor, putative | HC |
           chr1:3672178-3665624 | 20130731
          Length = 308

 Score =  530 bits (1366), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 260/319 (81%), Positives = 275/319 (86%), Gaps = 11/319 (3%)

Query: 1   MATSAAIGGALTAHDRWILTAVNXXXXXXXXXXXXFIVLCYLLFKELRKFSFKLVFYLAL 60
           MAT+AAI   LTA DR ILTAVN            FIVLCYLLFKELRKFSFKLVFYLAL
Sbjct: 1   MATTAAISTTLTASDRGILTAVNVGASSLSFAGSSFIVLCYLLFKELRKFSFKLVFYLAL 60

Query: 61  SDMLCSFFNVIGDPSQGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE 120
           SDMLCSFF++IGD               FFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE
Sbjct: 61  SDMLCSFFSIIGDIVH-----------IFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE 109

Query: 121 AMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGKAIHFITFYMPLWGAILYNGF 180
           AMFHLYVWGTSLVMTVMRSFGNDH+HFG WC +QTG TGKA+HF+TFY+PLWGAILYNGF
Sbjct: 110 AMFHLYVWGTSLVMTVMRSFGNDHRHFGTWCLSQTGLTGKAVHFVTFYLPLWGAILYNGF 169

Query: 181 TYLQVIRMLNNATRMAVGMSGQAYVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDF 240
           TY QVIRMLNNATRMA GMSGQAYVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDF
Sbjct: 170 TYWQVIRMLNNATRMASGMSGQAYVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDF 229

Query: 241 FDPSHKIFWLSLLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKCWPERLYRWLPNKFK 300
           F+P++KIFWLSLLD+GTA+LMGLFNSIAYGLNSSVRRAICERLDK WPERL RWLPN FK
Sbjct: 230 FEPNNKIFWLSLLDIGTASLMGLFNSIAYGLNSSVRRAICERLDKFWPERLNRWLPNNFK 289

Query: 301 YKNLQQESELVSFQTEGQR 319
           YK+L QESEL  F+TE QR
Sbjct: 290 YKSLSQESELSVFKTEDQR 308