Miyakogusa Predicted Gene

Lj5g3v0469110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0469110.1 Non Characterized Hit- tr|I1M9C6|I1M9C6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,93.48,9e-19,
,TC75015.path1.1
         (56 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g015020.1 | kinase 1B | HC | chr1:3676465-3673328 | 20130731    113   4e-26
Medtr1g015020.2 | kinase 1B | HC | chr1:3676444-3673267 | 20130731    113   4e-26
Medtr3g105320.1 | kinase 1B | HC | chr3:48552585-48554979 | 2013...    90   5e-19
Medtr2g041960.1 | Serine/Threonine kinase family protein | HC | ...    76   8e-15
Medtr4g125260.1 | receptor-like kinase | HC | chr4:51940056-5193...    69   1e-12
Medtr8g020920.1 | receptor-like kinase | HC | chr8:7399879-74025...    57   3e-09
Medtr4g123480.1 | receptor-like kinase | HC | chr4:50943298-5094...    50   6e-07
Medtr4g115120.1 | receptor-like kinase | HC | chr4:47514015-4751...    49   8e-07

>Medtr1g015020.1 | kinase 1B | HC | chr1:3676465-3673328 | 20130731
          Length = 388

 Score =  113 bits (282), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 52/56 (92%)

Query: 1   MKVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVYVAVYENGDKDKI 56
           +KVAMLAFKCLSHHPNPRP MSDVVKVLEPLQDFDDV IGPFVYVAV ENGDKD I
Sbjct: 333 LKVAMLAFKCLSHHPNPRPFMSDVVKVLEPLQDFDDVFIGPFVYVAVNENGDKDTI 388


>Medtr1g015020.2 | kinase 1B | HC | chr1:3676444-3673267 | 20130731
          Length = 388

 Score =  113 bits (282), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 51/56 (91%), Positives = 52/56 (92%)

Query: 1   MKVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVYVAVYENGDKDKI 56
           +KVAMLAFKCLSHHPNPRP MSDVVKVLEPLQDFDDV IGPFVYVAV ENGDKD I
Sbjct: 333 LKVAMLAFKCLSHHPNPRPFMSDVVKVLEPLQDFDDVFIGPFVYVAVNENGDKDTI 388


>Medtr3g105320.1 | kinase 1B | HC | chr3:48552585-48554979 |
           20130731
          Length = 384

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/50 (78%), Positives = 44/50 (88%)

Query: 1   MKVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVYVAVYEN 50
           +KVA L +KCLSHHPNPRP+MSDVVK LE LQDFDD+ IGPFVYVAV E+
Sbjct: 333 LKVAALTYKCLSHHPNPRPNMSDVVKSLELLQDFDDMFIGPFVYVAVSES 382


>Medtr2g041960.1 | Serine/Threonine kinase family protein | HC |
           chr2:18329227-18325624 | 20130731
          Length = 543

 Score = 75.9 bits (185), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/54 (61%), Positives = 41/54 (75%)

Query: 2   KVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVYVAVYENGDKDK 55
           K A LA++CLSH P  RP+MS+VVK+LEPLQDFDD+ IGPFVY    +N +  K
Sbjct: 330 KAASLAYQCLSHRPKSRPTMSNVVKILEPLQDFDDIPIGPFVYTVPIDNNEVAK 383


>Medtr4g125260.1 | receptor-like kinase | HC |
           chr4:51940056-51937267 | 20130731
          Length = 514

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/43 (67%), Positives = 34/43 (79%)

Query: 2   KVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVY 44
           K A LA++CLSH P  RP+MS VV  LEPL+DFDD+ IGPFVY
Sbjct: 336 KAAALAYQCLSHRPRNRPTMSTVVNTLEPLKDFDDIPIGPFVY 378


>Medtr8g020920.1 | receptor-like kinase | HC | chr8:7399879-7402554
           | 20130731
          Length = 475

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/48 (54%), Positives = 33/48 (68%)

Query: 2   KVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVYVAVYE 49
           K+AML ++CLSHH   RP+M  VVK LE +   +D+ IG FVYVA  E
Sbjct: 330 KLAMLTYQCLSHHDKSRPTMRTVVKTLEHVMKLNDIPIGHFVYVAPIE 377


>Medtr4g123480.1 | receptor-like kinase | HC |
           chr4:50943298-50944426 | 20130731
          Length = 206

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/43 (51%), Positives = 27/43 (62%)

Query: 2   KVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLIGPFVY 44
           K+A LA+ CLS  P  RP+M +VVK L PLQD +D  I    Y
Sbjct: 159 KIAQLAYSCLSREPKSRPNMDEVVKALTPLQDLNDFAISRKTY 201


>Medtr4g115120.1 | receptor-like kinase | HC |
           chr4:47514015-47510054 | 20130731
          Length = 444

 Score = 49.3 bits (116), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/38 (55%), Positives = 26/38 (68%)

Query: 2   KVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVLI 39
           K+A LA+ CLS  P  RP+M +VVK L PLQD +D  I
Sbjct: 364 KIAQLAYSCLSRDPKSRPNMDEVVKALTPLQDLNDFAI 401