Miyakogusa Predicted Gene

Lj5g3v0467070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0467070.1 Non Characterized Hit- tr|I1JTY5|I1JTY5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,55.74,0.00000009,seg,NULL,CUFF.53021.1
         (164 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g015040.1 | transmembrane protein, putative | HC | chr1:36...    82   3e-16

>Medtr1g015040.1 | transmembrane protein, putative | HC |
          chr1:3682071-3681008 | 20130731
          Length = 239

 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 44/60 (73%)

Query: 1  MDHTKNQGFIRKSWFPWITKVGFIVLIALLAKSVKSQDNVEEPSSGLLCISECATCPQIC 60
          M H KN GFI KSWF W T + F++L+    ++++ +D VEEPSSGLLCISEC TCP IC
Sbjct: 1  MGHNKNLGFITKSWFAWTTNIVFMLLVLFANRTLEIEDKVEEPSSGLLCISECVTCPTIC 60