Miyakogusa Predicted Gene

Lj5g3v0445880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0445880.1 Non Characterized Hit- tr|I1M836|I1M836_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2261
PE=,51.79,0.00000004, ,CUFF.53000.1
         (88 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g068200.1 | protein phosphatase 2C-like protein | HC | chr...    75   2e-14

>Medtr3g068200.1 | protein phosphatase 2C-like protein | HC |
           chr3:30835692-30837501 | 20130731
          Length = 388

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/56 (62%), Positives = 37/56 (66%)

Query: 1   MCKERLHEIAKEVNFVPDQNSEWKNTMKQGFICMDDEVQGWKSHINETTCRCELWT 56
           MCKERLHEI KE      +N EW NTM+QGF  MDDEVQ W S     TCRCEL T
Sbjct: 138 MCKERLHEIVKEEMNEGQENLEWNNTMQQGFARMDDEVQRWNSSSQSVTCRCELQT 193