Miyakogusa Predicted Gene

Lj5g3v0433750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0433750.1 Non Characterized Hit- tr|I1NEF3|I1NEF3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.82,0,GTP-BINDING
PROTEIN-PLANT,NULL; GTP-BINDING PROTEIN-RELATED,NULL; GTP1OBG,GTP
binding domain; no des,CUFF.53008.1
         (590 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |...   679   0.0  
Medtr2g079510.1 | nucleolar GTP-binding-like protein | HC | chr2...   216   4e-56
Medtr4g081850.1 | nucleolar GTP-binding-like protein | HC | chr4...   212   8e-55
Medtr4g050490.1 | P-loop nucleoside triphosphate hydrolase super...   122   8e-28
Medtr7g094890.1 | ribosome biogenesis GTPase A | HC | chr7:37900...    80   7e-15
Medtr7g056733.1 | GNL3L/Grn1 GTPase, putative | HC | chr7:203688...    68   3e-11

>Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |
           chr1:18178595-18172713 | 20130731
          Length = 599

 Score =  679 bits (1751), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/562 (65%), Positives = 424/562 (75%), Gaps = 13/562 (2%)

Query: 39  LTLNGKKKVEKDPGIPNDWPFKEQELKALEXXXXXXIDELEQXXXXXXXXXXXXXLGLLE 98
           L L+GKKKVEKDPGIPNDWPFKEQELK LE      + EL +              GL  
Sbjct: 39  LQLSGKKKVEKDPGIPNDWPFKEQELKLLEARRERALAELAKKKDERKERARKRKAGLPV 98

Query: 99  DDDSSKVVD--SNENTTFVKT-----RDTSDKAFYKDLVKVIEASDVILEVLDARDPLGT 151
           DDD+S  V+  S ENT  V T     +D+SD+AF  DL  VI  SDVILEVLDARDPLGT
Sbjct: 99  DDDNSNSVETASIENTESVPTVAKTNKDSSDRAFAGDLEAVIATSDVILEVLDARDPLGT 158

Query: 152 RCVDIEKMVMKMGPDKHLVLLLNKIDLVPREALEKWLKYLREELPTVAFKCSTQQQRSNL 211
           RCV+IEK V   G  K  VLLLNKIDLVPRE++EKWLKYLREE PTVAFKCSTQQQ+SNL
Sbjct: 159 RCVNIEKRVRDSGTYKRHVLLLNKIDLVPRESVEKWLKYLREEFPTVAFKCSTQQQKSNL 218

Query: 212 GWKSSKTAKSSNTLQLSDCLGADTLLKLLKNYSRSHEIKKSITVGLVGLPNVGKSSLINS 271
           G   SK  K+SNTLQLSDCLGA+TLLKLLKNY+RS ++K SITVGLVGLPNVGKSSLINS
Sbjct: 219 G--RSKKIKTSNTLQLSDCLGAETLLKLLKNYARSDKLKTSITVGLVGLPNVGKSSLINS 276

Query: 272 LKRCHVVNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSKENDSSTALKNCKRIEKLE 331
           L R H V+V A+ G TRS QE++LDKNVKLLDCPGVVML S+END++ ALKNCKRIEKL 
Sbjct: 277 LMRSHAVHVSASAGSTRSKQEIRLDKNVKLLDCPGVVMLDSRENDATIALKNCKRIEKLA 336

Query: 332 DPISPVKEILKLCPSRLLVTLYKIPSFDSVDDFLQKVSTVRGKLKKGGIVDTEAAARIVL 391
           DP+SPVKEILKLCP+R+L++LYKIPSFDSVDDFLQ V+TVRGKLKKGGIVD +AAARIVL
Sbjct: 337 DPVSPVKEILKLCPARVLISLYKIPSFDSVDDFLQIVATVRGKLKKGGIVDIDAAARIVL 396

Query: 392 HDWNEGKIPYYTMPPVRDQGELSEAKIVSEFAKEFNIDDVYNSETSFIGSLKSADAFDPV 451
           HDWN GKIPYYTMPPVRDQGE SEAKIVS+F+KEFNID+VYNSETSFIG+LK     D V
Sbjct: 397 HDWNIGKIPYYTMPPVRDQGEPSEAKIVSQFSKEFNIDEVYNSETSFIGNLKPTVELDHV 456

Query: 452 EVPSSGPLNLDEAMLEDDQQVKPSEQ-EDPENMADNDSDEAMEDDNGDASKNKGNSAASR 510
           EVPSS PL  DE MLEDD+ V+ ++Q E PEN+ DND DE+ME    D SK K  SA+S+
Sbjct: 457 EVPSSCPLIFDETMLEDDKPVELAKQDEGPENVDDNDEDESMECGKEDVSKEKVKSASSK 516

Query: 511 QNEKLYTADGILNPX-XXXXXXXXXXXXXXATSDPMXXXXXXXXXXXXXGS--TMDAEGS 567
           QNEKLYTA+GILNP                ++SDPM              +     ++G 
Sbjct: 517 QNEKLYTAEGILNPKLRRAEKKKKKKANKASSSDPMDGDYDFKVDYFKKDTMDADGSDGG 576

Query: 568 NNEDEDDEQVNSEVPMSGIQVD 589
           ++ D DDEQVN+E PMSG++VD
Sbjct: 577 DDNDVDDEQVNTEAPMSGVEVD 598


>Medtr2g079510.1 | nucleolar GTP-binding-like protein | HC |
           chr2:33482137-33476593 | 20130731
          Length = 574

 Score =  216 bits (551), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/400 (35%), Positives = 209/400 (52%), Gaps = 38/400 (9%)

Query: 98  EDDDSSKVVDSNENTTFVKTRDTSDKAFYKDLVKVIEASDVILEVLDARDPLGTRCVDIE 157
           E D++    D   +T F K +    K  + +L KVI++SDV+++V+DARDP GTRC  +E
Sbjct: 179 EADEADGFRDLVRHTMFEKGQS---KRIWGELYKVIDSSDVVVQVIDARDPQGTRCYHLE 235

Query: 158 KMVMKMGPDKHLVLLLNKIDLVPREALEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSK 217
           K + +    KH+VLLLNK DL+P  A + WL+ L +E PT+AF  S              
Sbjct: 236 KHLKENCKHKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHAS-------------- 281

Query: 218 TAKSSNTLQLSDCLGADTLLKLLKNYSRSHEIKKSITVGLVGLPNVGKSSLINSLKRCHV 277
                    ++   G  +LL +L+ ++R    K++I+VG VG PNVGKSS+IN+L+  +V
Sbjct: 282 ---------INKSFGKGSLLSVLRQFARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNV 332

Query: 278 VNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSKENDSST--ALKNCKRIEKLEDPIS 335
             V   PG T+  Q + L K + L+DCPGVV      NDS T   LK   R+  L+D   
Sbjct: 333 CKVAPIPGETKVWQYITLTKRIFLIDCPGVVY---HNNDSETDVVLKGVVRVTNLKDAAD 389

Query: 336 PVKEILKLCPSRLLVTLYKIPSFDSVDDFLQKVSTVRGKLKKGGIVDTEAAARIVLHDWN 395
            + E+LK      L   YKI  +   +DFL ++    GKL KGG  D   AA+++LHDW 
Sbjct: 390 HIGEVLKRVKKEHLTRAYKIKEWVDENDFLLQLCKSSGKLLKGGEPDLMTAAKMILHDWQ 449

Query: 396 EGKIPYYTMPPVRDQGELSEAKIVSEFAKEFNIDDVYNSETSFIGSLKSA-DAFDPVEVP 454
            GKIP++  PP +D    SE   V+    +  +D  +N  ++ I ++ +   +     VP
Sbjct: 450 RGKIPFFVPPPRQDALSESEEPNVNGIDVDEAVD--HNQASAAIKAIANVLSSQQQRNVP 507

Query: 455 SSGPLNLDEAMLEDDQQVKPSEQEDPENMADNDSDEAMED 494
             G L  +  + E+     P    D  +  D DSD + ED
Sbjct: 508 VQGDLYNENELDEETADQLP----DTGDYTDEDSDASEED 543


>Medtr4g081850.1 | nucleolar GTP-binding-like protein | HC |
           chr4:31881653-31883769 | 20130731
          Length = 563

 Score =  212 bits (539), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 115/286 (40%), Positives = 163/286 (56%), Gaps = 28/286 (9%)

Query: 123 KAFYKDLVKVIEASDVILEVLDARDPLGTRCVDIEKMVMKMGPDKHLVLLLNKIDLVPRE 182
           K  + +L KVI++SDV+++V+DARDP GTRC  +EK + +    KH+VLLLNK DL+P  
Sbjct: 193 KRIWGELYKVIDSSDVVVQVIDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLIPAW 252

Query: 183 ALEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSKTAKSSNTLQLSDCLGADTLLKLLKN 242
           A + WL+ L +E PT+AF  S                       ++   G  +LL +L+ 
Sbjct: 253 ATKGWLRVLSKEYPTLAFHAS-----------------------INKSFGKGSLLSILRQ 289

Query: 243 YSRSHEIKKSITVGLVGLPNVGKSSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLL 302
           ++R    K++I+VG VG PNVGKSS+IN+L+  +V  V   PG T+  Q + L K + L+
Sbjct: 290 FARLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLI 349

Query: 303 DCPGVVMLKSKENDSST--ALKNCKRIEKLEDPISPVKEILKLCPSRLLVTLYKIPSFDS 360
           DCPGVV      NDS T   LK   R+  L+D    + E+LK      L   YKI  +  
Sbjct: 350 DCPGVVY---HNNDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKEHLTRAYKIKEWVD 406

Query: 361 VDDFLQKVSTVRGKLKKGGIVDTEAAARIVLHDWNEGKIPYYTMPP 406
            +DFL ++    GKL KGG  D   AA+++LHDW  GKIP++  PP
Sbjct: 407 ENDFLLQLCKSSGKLLKGGEPDLMTAAKMILHDWQRGKIPFFVPPP 452


>Medtr4g050490.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr4:17882585-17887926 |
           20130731
          Length = 589

 Score =  122 bits (307), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 153/340 (45%), Gaps = 36/340 (10%)

Query: 110 ENTTFVKTRDTSDKAFYKDLVKVIEASDVILEVLDARDPLGTRCVDIEKMVMKMGPDKHL 169
           EN   V T    +   ++ L +V+E SD+++ V+D+RDPL  RC D+E    ++   K+ 
Sbjct: 143 ENKKLVLTPFEKNLDIWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAKEVDVHKNT 202

Query: 170 VLLLNKIDLVPREALEKWLKYLREELPTVAFKCSTQQQRSNLGWKSSKTAKSSNTLQL-- 227
           +LL+NK DL+P    EKW +Y R       F  S +   + L  K   ++++ N      
Sbjct: 203 LLLVNKADLLPASVREKWAEYFRAHDILFIF-WSAKAATAVLEGKKLGSSQADNMASADN 261

Query: 228 --SDCLGADTLLKLLKNYSRS--------------------HEIKKSITVGLVGLPNVGK 265
             +   G D LL  L++ + +                          + VG VG PNVGK
Sbjct: 262 PDTKIYGRDELLARLQSEAEAIVDMRRSSGSSKSSDDNASVSSSSSHVVVGFVGYPNVGK 321

Query: 266 SSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSKENDSSTALKNCK 325
           SS IN+L       V +TPG T+  Q + + + + L DCPG+V      +          
Sbjct: 322 SSTINALVGQKKTGVTSTPGKTKHFQTLIISEKLILCDCPGLVFPSFSSSRYEMITCGVL 381

Query: 326 RIEKLEDPISPVKEILKLCPSRLLVTLYKIP-----SFDS------VDDFLQKVSTVRGK 374
            I+++      V+ +    P  ++  +Y I      S++S        + L+     RG+
Sbjct: 382 PIDRMTQHRECVQVVANRVPRHVIEEIYNISLPKPKSYESQSRPPLASELLRTYCASRGQ 441

Query: 375 LKKGGIVDTEAAARIVLHDWNEGKIPYYTMPPVRDQGELS 414
               G+ D   A+R +L D+ +GK+P+Y MPP     EL+
Sbjct: 442 TTSSGLPDETRASRQILKDYIDGKLPHYEMPPGLSTQELA 481


>Medtr7g094890.1 | ribosome biogenesis GTPase A | HC |
           chr7:37900080-37894545 | 20130731
          Length = 373

 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 133/295 (45%), Gaps = 46/295 (15%)

Query: 127 KDLVKVIEASDVILEVLDARDPLGTRCVDIEKMVMKMGPDKHLVLLLNKIDLVPREALEK 186
           K+L + ++  DV++EV D R PL T      +M + +G +K  +L+LN+ D++       
Sbjct: 109 KELKEQLKLMDVVIEVRDGRIPLST---SHPQMDLWLG-NKKRILVLNREDMISTADRNA 164

Query: 187 WLKYLREELPTVAFKCSTQQQRSNLGWKSSKTAKSSNTLQLSDCLGADTLLKLLKNYSRS 246
           W +Y       V F          LG  + K  +      L+  L AD       N  R 
Sbjct: 165 WAEYFTRHGTKVVF------SNGQLGMGTLKLCR------LAKELAADV------NVKRR 206

Query: 247 HE--IKKSITVGLVGLPNVGKSSLINSLKRCHVVNVGATPGLTRSMQEVQLDKNVKLLDC 304
            +  + + +  G+VG PNVGKSSLIN L +  +      PG+TR ++ V+  K+++LLD 
Sbjct: 207 AKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRDLRWVRFGKDLELLDS 266

Query: 305 PGVVMLKSKENDSSTALKNCKRIEKLEDPISPVKEILKLCPSRLLVTLYKIPSFDSVDDF 364
           PG++ ++  +  ++  L  C  I +    ++ V  I       L+  L K+P+     D 
Sbjct: 267 PGILPMRISDQSAAIKLAICDDIGERSYDVADVAAI-------LVQMLTKLPAVGR--DA 317

Query: 365 LQKVSTVRGKLKKGGIV-----------DTEAAARIVLHDWNEGKIPYYTM--PP 406
           L K    R   + G I            D   AA  VL D+ +G+  + ++  PP
Sbjct: 318 LCKRYKFRVDSECGKIFIEKLALHLFNGDVHQAAYRVLSDFRKGRFGWTSLERPP 372


>Medtr7g056733.1 | GNL3L/Grn1 GTPase, putative | HC |
          chr7:20368805-20369248 | 20130731
          Length = 92

 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/42 (73%), Positives = 34/42 (80%)

Query: 39 LTLNGKKKVEKDPGIPNDWPFKEQELKALEXXXXXXIDELEQ 80
          + L+GK+KVEKDPGIPNDWPFKEQELKALE      I ELEQ
Sbjct: 39 VQLSGKRKVEKDPGIPNDWPFKEQELKALEARRERAIQELEQ 80