Miyakogusa Predicted Gene

Lj5g3v0433520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0433520.1 Non Characterized Hit- tr|B9RQX9|B9RQX9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,47.79,7e-19,seg,NULL,CUFF.53004.1
         (238 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g015650.1 | hypothetical protein | HC | chr1:3979166-39753...   188   4e-48
Medtr3g105210.1 | hypothetical protein | HC | chr3:48514920-4851...   125   3e-29
Medtr4g125330.1 | hypothetical protein | HC | chr4:51962409-5196...    68   8e-12
Medtr3g064350.1 | hypothetical protein | HC | chr3:28959653-2896...    60   2e-09
Medtr3g108910.1 | hypothetical protein | HC | chr3:50337688-5033...    52   3e-07
Medtr1g009640.1 | hypothetical protein | HC | chr1:1409585-14114...    52   6e-07
Medtr1g045430.1 | oligopeptide transporter-like protein | HC | c...    51   8e-07

>Medtr1g015650.1 | hypothetical protein | HC | chr1:3979166-3975307
           | 20130731
          Length = 295

 Score =  188 bits (477), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 107/212 (50%), Positives = 123/212 (58%), Gaps = 15/212 (7%)

Query: 34  IGRNS------DVSSERSMXXXXXXXXXXAESAYSGGALNGMEALEEVLPIRRGISKFYN 87
           IGRNS      +VSSERSM          AES Y+GGAL+ MEALEEVLPIRR IS FY+
Sbjct: 88  IGRNSDDDDDDEVSSERSMDENE------AESKYNGGALDCMEALEEVLPIRRSISNFYS 141

Query: 88  GKSMSFTSLADAASSPSLKDIVKPENAYTRRRRNLMAFSHGWDKNRSYPLRSNXXXXXXX 147
           GKS SFTSLAD  ++PS+KDIVKPENAYTRRRRNL+AF+HGWDKN+++PLRSN       
Sbjct: 142 GKSKSFTSLADVVTTPSVKDIVKPENAYTRRRRNLLAFNHGWDKNKNFPLRSNSGGISKR 201

Query: 148 XXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPRHRVSLIANPRS 207
                       V                                 HP +RVS +A+P  
Sbjct: 202 TMSLSRSALALAVALSNSDSSSSFTSDDSATSTSYSSAPSSPLPPRHPGNRVSSLASPLQ 261

Query: 208 ---YSLADLQHCAIAATMKMSSPSIGNEAAHQ 236
              +SLADL HCAIAATMKM S SI NE  H 
Sbjct: 262 RNFFSLADLHHCAIAATMKMPSSSIENETTHH 293


>Medtr3g105210.1 | hypothetical protein | HC |
           chr3:48514920-48513766 | 20130731
          Length = 200

 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/108 (60%), Positives = 78/108 (72%), Gaps = 6/108 (5%)

Query: 34  IGRNSDVSSERSMXXXXXXXXXXAESAYS-GGALNGMEALEEVLPIRRGISKFYNGKSMS 92
           IG++SD S  R            AES Y+    LN M++L++ LPIRRGISKFY+GKS S
Sbjct: 28  IGKDSDASECRD-----NDDDNEAESTYNYDEPLNMMDSLQQFLPIRRGISKFYDGKSKS 82

Query: 93  FTSLADAASSPSLKDIVKPENAYTRRRRNLMAFSHGWDKNRSYPLRSN 140
           F SLADA SSPS KDI KPENAYTRRRRNLMA +H W+KN+++ LRSN
Sbjct: 83  FMSLADAVSSPSAKDIAKPENAYTRRRRNLMALNHVWEKNKNFLLRSN 130


>Medtr4g125330.1 | hypothetical protein | HC |
           chr4:51962409-51966933 | 20130731
          Length = 243

 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 51/72 (70%)

Query: 64  GALNGMEALEEVLPIRRGISKFYNGKSMSFTSLADAASSPSLKDIVKPENAYTRRRRNLM 123
           G L+ M+ LE+ LP+++ IS FY GKS SFT LADAA +  L++IVK E+ Y ++R++ +
Sbjct: 66  GPLDTMKDLEKDLPVKKSISNFYIGKSKSFTDLADAAGATCLQEIVKAEDPYAKKRKDSL 125

Query: 124 AFSHGWDKNRSY 135
           A +    ++RSY
Sbjct: 126 ARNLLIGRSRSY 137


>Medtr3g064350.1 | hypothetical protein | HC |
           chr3:28959653-28961077 | 20130731
          Length = 205

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 3/69 (4%)

Query: 66  LNGMEALEEVLPIRRGISKFYNGKSMSFTSLADAASSPSLKDIVKPENAYTRRRRNLMAF 125
           L+ M +L + LPI+RG+SKFY GKS SFTSL +     SL+D+ KPE+ Y +R ++  ++
Sbjct: 76  LSDMSSLFQQLPIKRGLSKFYQGKSQSFTSLTNVK---SLEDLAKPESPYNKRLKSCRSY 132

Query: 126 SHGWDKNRS 134
              ++   S
Sbjct: 133 GGFYESQES 141


>Medtr3g108910.1 | hypothetical protein | HC |
           chr3:50337688-50335890 | 20130731
          Length = 234

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 10/80 (12%)

Query: 65  ALNGMEALEEVLPIRRGISKFYNGKSMSFTSLADAASSPSLKDIVKPENAYTRRRRNLMA 124
            L  +++LE+ LPI+RG+S  + GKS SFT L+  +   +L ++ K E+ + +RRR L+A
Sbjct: 67  GLGSLDSLEDSLPIKRGLSSHFEGKSKSFTDLSQVS---NLNELQKQESPFNKRRRVLIA 123

Query: 125 --FS-----HGWDKNRSYPL 137
             FS     + W   +S PL
Sbjct: 124 SKFSRKSSFYSWSNPQSMPL 143


>Medtr1g009640.1 | hypothetical protein | HC | chr1:1409585-1411442
           | 20130731
          Length = 245

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 5/68 (7%)

Query: 57  AESAYSGGALNGMEALEEVLPIRRGISKFYNGKSMSFTSLADAASSPSLKDIVKPENAYT 116
            +S + G  LN +++LE+ LPI++G+S  + GKS SF+ L+   +   LK   K EN + 
Sbjct: 70  VQSKFKG--LNSLDSLEDSLPIKKGLSNHFIGKSKSFSDLSQVTTVTELK---KQENPFN 124

Query: 117 RRRRNLMA 124
           +RRR L+A
Sbjct: 125 KRRRLLIA 132


>Medtr1g045430.1 | oligopeptide transporter-like protein | HC |
           chr1:17035798-17036349 | 20130731
          Length = 183

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 5/68 (7%)

Query: 57  AESAYSGGALNGMEALEEVLPIRRGISKFYNGKSMSFTSLADAASSPSLKDIVKPENAYT 116
            ES + G  LN +++LE+ LPI++G+S  Y GKS SF  ++   +   LK   K E+ + 
Sbjct: 65  VESKFKG--LNSLDSLEDSLPIKKGLSNHYTGKSRSFLDMSQVTTVEELK---KQEHPFN 119

Query: 117 RRRRNLMA 124
           +RRR L+A
Sbjct: 120 KRRRLLIA 127