Miyakogusa Predicted Gene

Lj5g3v0422420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0422420.1 Non Characterized Hit- tr|G7IY67|G7IY67_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,78.43,0.000000000000008,SUBFAMILY NOT NAMED,NULL;
PHENYLALANYL-TRNA SYNTHETASE,NULL; DUF2431,Domain of unknown function
DUF2,97004_g.1
         (67 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g061070.1 | DUF2431 domain protein | LC | chr3:24245457-24...    85   2e-17
Medtr5g093740.1 | DUF2431 domain protein | LC | chr5:40928768-40...    74   4e-14
Medtr2g027540.2 | nucleic acid-binding protein, putative | HC | ...    72   8e-14
Medtr2g027540.1 | nucleic acid-binding protein, putative | HC | ...    72   9e-14
Medtr6g082260.1 | DUF2431 domain protein | HC | chr6:30709133-30...    67   3e-12
Medtr6g082340.1 | methyltransferase small domain protein | HC | ...    67   3e-12
Medtr6g082310.1 | DUF2431 domain protein | LC | chr6:30728134-30...    65   2e-11

>Medtr3g061070.1 | DUF2431 domain protein | LC |
          chr3:24245457-24248169 | 20130731
          Length = 467

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/51 (78%), Positives = 44/51 (86%), Gaps = 4/51 (7%)

Query: 17 EEPEEGVKWVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHDSY 67
          +EP    KWVTHY SDHQILLVGDGDFSFSL LAKAFGSA+NIVA+S D+Y
Sbjct: 32 DEP----KWVTHYCSDHQILLVGDGDFSFSLSLAKAFGSASNIVASSLDTY 78


>Medtr5g093740.1 | DUF2431 domain protein | LC |
          chr5:40928768-40931464 | 20130731
          Length = 529

 Score = 73.6 bits (179), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 41/49 (83%)

Query: 18 EPEEGVKWVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHDS 66
          +P+   KW+ HYS+ H+ILLVG+GDFSF+L LA AFGSA+NIVATS DS
Sbjct: 2  DPKMEEKWIKHYSNHHKILLVGEGDFSFALSLANAFGSASNIVATSRDS 50



 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 37/43 (86%)

Query: 24  KWVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHDS 66
           +W+ HY+S  +ILLVG+GDFSF+L LA+AF SA+N+VATS DS
Sbjct: 257 RWIKHYNSCQKILLVGEGDFSFALSLARAFRSASNMVATSLDS 299


>Medtr2g027540.2 | nucleic acid-binding protein, putative | HC |
          chr2:10086430-10089465 | 20130731
          Length = 225

 Score = 72.4 bits (176), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 37/44 (84%)

Query: 23 VKWVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHDS 66
           KW  HYSS H+IL VG+GDFSFSLCLA+AFGSA N++ATS DS
Sbjct: 40 AKWKKHYSSKHKILFVGEGDFSFSLCLARAFGSAHNLIATSLDS 83


>Medtr2g027540.1 | nucleic acid-binding protein, putative | HC |
          chr2:10086430-10089465 | 20130731
          Length = 249

 Score = 72.4 bits (176), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 32/43 (74%), Positives = 37/43 (86%)

Query: 24 KWVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHDS 66
          KW  HYSS H+IL VG+GDFSFSLCLA+AFGSA N++ATS DS
Sbjct: 41 KWKKHYSSKHKILFVGEGDFSFSLCLARAFGSAHNLIATSLDS 83


>Medtr6g082260.1 | DUF2431 domain protein | HC |
          chr6:30709133-30707666 | 20130731
          Length = 211

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/42 (78%), Positives = 36/42 (85%)

Query: 24 KWVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHD 65
          K V HYSS H ILLVG+GDFSF+LCLAKAFGSA N+VATS D
Sbjct: 4  KIVKHYSSFHNILLVGEGDFSFALCLAKAFGSAVNMVATSLD 45


>Medtr6g082340.1 | methyltransferase small domain protein | HC |
          chr6:30738874-30737745 | 20130731
          Length = 215

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/43 (69%), Positives = 35/43 (81%)

Query: 24 KWVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHDS 66
          K + HY S H+ILLVG+GDFSFSLCLA+ FGSA N+ ATS DS
Sbjct: 4  KRIMHYRSSHKILLVGEGDFSFSLCLARTFGSAVNMTATSLDS 46


>Medtr6g082310.1 | DUF2431 domain protein | LC |
          chr6:30728134-30726748 | 20130731
          Length = 206

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/42 (73%), Positives = 35/42 (83%)

Query: 24 KWVTHYSSDHQILLVGDGDFSFSLCLAKAFGSAANIVATSHD 65
          K +THY S  + LLVG+GDFSFSLCLAKAFGSA N+VATS D
Sbjct: 4  KSITHYKSSQKNLLVGEGDFSFSLCLAKAFGSARNMVATSLD 45