Miyakogusa Predicted Gene

Lj5g3v0405030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0405030.1 tr|G7I9X4|G7I9X4_MEDTR Delta-6-desaturase
OS=Medicago truncatula GN=MTR_1g016070 PE=4 SV=1,82.66,0,SUBFAMILY NOT
NAMED,NULL; FATTY ACID DESATURASE 2,NULL; seg,NULL;
FA_desaturase,Fatty acid
desaturas,NODE_41889_length_1550_cov_146.452255.path2.1
         (346 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g016070.1 | fatty acid/sphingolipid desaturase | HC | chr1...   570   e-163
Medtr8g056100.1 | fatty acid/sphingolipid desaturase | HC | chr8...   455   e-128
Medtr1g016060.1 | fatty acid/sphingolipid desaturase | LC | chr1...   362   e-100

>Medtr1g016070.1 | fatty acid/sphingolipid desaturase | HC |
           chr1:4195061-4196827 | 20130731
          Length = 453

 Score =  570 bits (1468), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 272/346 (78%), Positives = 295/346 (85%)

Query: 1   MGLFDKKEHGALISLCVMAVLFCASVSGVLLSDSAWVHVGCAALMGFQWIQSGWIGHDSG 60
           +GLF++K HG L+ L +++V+F  SV GVL  DSA VHV    LMG  WIQSGWIGHDSG
Sbjct: 108 LGLFEEKGHGVLLLLSIISVMFFVSVYGVLFCDSAVVHVLSGGLMGLLWIQSGWIGHDSG 167

Query: 61  HYQIMVNRRFNRFVQILSGNCLTGISIGWWKWNHNAHHIACNSLDFDPDLQHLPXXXXXX 120
           HYQ+MVNR++N+F+QILSGN L GISI WWKWNHNAHH+ACNSLDFDPDLQHLP      
Sbjct: 168 HYQVMVNRKWNQFMQILSGNVLAGISIEWWKWNHNAHHLACNSLDFDPDLQHLPFFVVSS 227

Query: 121 XXXXXXXXXXYERKMNFDPVARFLVSYQHLSYYPVMCFARINLFAQSFMLLLSKRKVPNR 180
                     Y RKMNFD  ARFLVSYQH SYYPVMCFAR+NLFAQSF LL S RKVPNR
Sbjct: 228 KFFTSLTSCFYGRKMNFDSFARFLVSYQHWSYYPVMCFARLNLFAQSFFLLFSNRKVPNR 287

Query: 181 WVELSGLLVFWIWYPLLVSCLPNWGERVLFVLVSFSVTGIQHVQFTLNHFSASVYVGPPT 240
            +EL GL +FWIWYPLLVSCLPNWGERVLFVL SF VTGIQHVQFTLNHFSASVYVGPPT
Sbjct: 288 KMELLGLALFWIWYPLLVSCLPNWGERVLFVLASFCVTGIQHVQFTLNHFSASVYVGPPT 347

Query: 241 AHDWFEKQTHGTLDVSCSPWMDWFHGGLQFQVEHHLFPRLPRCHLRKISPLVKDLCKKHN 300
           AHDWFEKQ HGTLDV CS WMDWFHGGLQFQ+EHHLFPRLPRC+LRKISPLVKDLCKKHN
Sbjct: 348 AHDWFEKQAHGTLDVKCSSWMDWFHGGLQFQIEHHLFPRLPRCNLRKISPLVKDLCKKHN 407

Query: 301 LPYNCVSFWKANVLTLRTLRNAALQARDLSNPVPKNLVWEAVNTHG 346
           LPYNCVSFWKANVLT++TLRNAALQARDL+ PVP+NLVWEAVNTHG
Sbjct: 408 LPYNCVSFWKANVLTIQTLRNAALQARDLTKPVPRNLVWEAVNTHG 453


>Medtr8g056100.1 | fatty acid/sphingolipid desaturase | HC |
           chr8:24418593-24416314 | 20130731
          Length = 449

 Score =  455 bits (1170), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 209/347 (60%), Positives = 267/347 (76%), Gaps = 1/347 (0%)

Query: 1   MGLFDKKEHGALISLCVMAVLFCASVSGVLLSDSAWVHVGCAALMGFQWIQSGWIGHDSG 60
           MGLF+KKEH AL +L  +A++    V GV+   S W H+G   L+G  W+QS +IGHDSG
Sbjct: 103 MGLFEKKEHVALFTLTSVAIMLAIVVYGVVGCTSVWAHLGSGMLLGLLWMQSTYIGHDSG 162

Query: 61  HYQIMVNRRFNRFVQILSGNCLTGISIGWWKWNHNAHHIACNSLDFDPDLQHLPXXXXXX 120
           HY++M +R +N+  QIL GNC+TGISI WWKW HNAHHIACNSLD+DPDLQH+P      
Sbjct: 163 HYEVMSSRSYNKLAQILCGNCMTGISIAWWKWTHNAHHIACNSLDYDPDLQHIPVFAVSS 222

Query: 121 XXXXXXXXXXYERKMNFDPVARFLVSYQHLSYYPVMCFARINLFAQSFMLLLS-KRKVPN 179
                     Y+R++ FD ++RFL+SYQH+++YPV+CFAR+NL+ Q+F+LL S  R VP+
Sbjct: 223 RFFGSIKSYFYDRQLKFDALSRFLISYQHITFYPVLCFARLNLYLQTFLLLFSPSRNVPD 282

Query: 180 RWVELSGLLVFWIWYPLLVSCLPNWGERVLFVLVSFSVTGIQHVQFTLNHFSASVYVGPP 239
           R   + G+ VFW W+PLL+S LP+W ER++FVL  F V  IQH+QF LNHF+A+VY+GPP
Sbjct: 283 RLYNIMGIGVFWTWFPLLLSALPSWPERLMFVLACFVVCSIQHLQFCLNHFAANVYLGPP 342

Query: 240 TAHDWFEKQTHGTLDVSCSPWMDWFHGGLQFQVEHHLFPRLPRCHLRKISPLVKDLCKKH 299
           + +DWF+KQT GTLD++CS WMDWF GGLQFQ+EHHLFPRLPR  LRK+SPLV DLCKKH
Sbjct: 343 SGNDWFQKQTAGTLDITCSTWMDWFFGGLQFQLEHHLFPRLPRAQLRKVSPLVIDLCKKH 402

Query: 300 NLPYNCVSFWKANVLTLRTLRNAALQARDLSNPVPKNLVWEAVNTHG 346
           NLPY  +SF +AN+ TL+TLR AALQARD +N  P+NL+WEA NTHG
Sbjct: 403 NLPYRSLSFVEANLWTLKTLRTAALQARDFTNSAPQNLLWEAFNTHG 449


>Medtr1g016060.1 | fatty acid/sphingolipid desaturase | LC |
           chr1:4186114-4190494 | 20130731
          Length = 645

 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 177/255 (69%), Positives = 196/255 (76%)

Query: 1   MGLFDKKEHGALISLCVMAVLFCASVSGVLLSDSAWVHVGCAALMGFQWIQSGWIGHDSG 60
           MG F+ K  G L+ + ++ V+ C SV GVL SDS+ V V C  LMGF WIQSGWI HDS 
Sbjct: 103 MGFFEYKGCGVLLMISLIIVMLCVSVCGVLFSDSSCVCVCCGGLMGFLWIQSGWISHDSC 162

Query: 61  HYQIMVNRRFNRFVQILSGNCLTGISIGWWKWNHNAHHIACNSLDFDPDLQHLPXXXXXX 120
           HYQIM N  +N FVQILSGN L+ IS+ WWKWNHNAHH+ACNSLDFDPDLQHLP      
Sbjct: 163 HYQIMANCNWNWFVQILSGNFLSSISMEWWKWNHNAHHLACNSLDFDPDLQHLPFFVVSS 222

Query: 121 XXXXXXXXXXYERKMNFDPVARFLVSYQHLSYYPVMCFARINLFAQSFMLLLSKRKVPNR 180
                     ++RKMNFD  ARFLVSYQH SY P +C AR NLFA+SF LLLS RKVPNR
Sbjct: 223 KFFTSLTSCFHDRKMNFDSFARFLVSYQHWSYCPGICLARFNLFARSFFLLLSNRKVPNR 282

Query: 181 WVELSGLLVFWIWYPLLVSCLPNWGERVLFVLVSFSVTGIQHVQFTLNHFSASVYVGPPT 240
            +EL GLLVFWIWYPLLVSCLPNWGERVLFV+ SFSVTGIQHVQFT NHFSASVY+G PT
Sbjct: 283 KIELLGLLVFWIWYPLLVSCLPNWGERVLFVIASFSVTGIQHVQFTFNHFSASVYIGQPT 342

Query: 241 AHDWFEKQTHGTLDV 255
           +HDWFEKQT GTLD 
Sbjct: 343 SHDWFEKQTSGTLDT 357



 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/38 (68%), Positives = 29/38 (76%)

Query: 308 FWKANVLTLRTLRNAALQARDLSNPVPKNLVWEAVNTH 345
           F K    TL TLRNAALQARDL+ P+P+NLVWEA  TH
Sbjct: 347 FEKQTSGTLDTLRNAALQARDLTKPIPRNLVWEAGVTH 384