Miyakogusa Predicted Gene

Lj5g3v0404800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0404800.1 Non Characterized Hit- tr|I1M923|I1M923_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,89.53,0,PLP-dependent
transferases,Pyridoxal phosphate-dependent transferase, major domain;
GDC-P,Glycine cl,CUFF.52994.1
         (1027 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g016230.1 | glycine dehydrogenase [decarboxylating] protei...  1860   0.0  
Medtr1g016280.1 | glycine dehydrogenase [decarboxylating] protei...   115   3e-25

>Medtr1g016230.1 | glycine dehydrogenase [decarboxylating] protein |
            HC | chr1:4270888-4277979 | 20130731
          Length = 1056

 Score = 1860 bits (4817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 896/1036 (86%), Positives = 939/1036 (90%), Gaps = 16/1036 (1%)

Query: 1    MERARRLANRAILKRLVSEAKHNRKHEPVWNSAAASTTTVPFYXXXXXXXXXXXXXXXLR 60
            MERARRLANRA LKRL+SEAK N K+E       ++TTT P                  R
Sbjct: 1    MERARRLANRATLKRLLSEAKQNCKNE-------STTTTAPLPFSSSSRYVSSVSNSVFR 53

Query: 61   NRGSK---SATNIPRAAAGL------SQTRSISVEALQPSDTFPRRHNSATPEEQAKMSL 111
            NRGS       N+ R   G       +Q+RSI+VEAL+PSDTF RRHNSATPEEQ KM+ 
Sbjct: 54   NRGSNVFGRNNNVSRGVGGFHGSGSSTQSRSITVEALKPSDTFARRHNSATPEEQTKMAE 113

Query: 112  ACGFDNVDSLVDATVPKSIRLKEMKFNKFDGGLTEGQMIEHMKELASKNKVFKSFIGMGY 171
            +CGFD++DSLVDATVPKSIRLKEMKFNKFD GLTEGQMIEHMK+LASKNKVFKSFIGMGY
Sbjct: 114  SCGFDHLDSLVDATVPKSIRLKEMKFNKFDEGLTEGQMIEHMKDLASKNKVFKSFIGMGY 173

Query: 172  YNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMSNASLLD 231
            YNTHVPPVILRNI+ENPAWYTQYTPYQAEISQGRLESLLN+QT+ITDLTGLPMSNASLLD
Sbjct: 174  YNTHVPPVILRNILENPAWYTQYTPYQAEISQGRLESLLNFQTLITDLTGLPMSNASLLD 233

Query: 232  EGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGFELKVVVADLKDIDYKS 291
            EGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGFELKVVV DLKDIDYKS
Sbjct: 234  EGTAAAEAMSMCNNIQKGKKKTFIIASNCHPQTIDICKTRADGFELKVVVKDLKDIDYKS 293

Query: 292  GDVCGVLVQYPGTEGEVLDYGEFIKKAHAHEVKVVMASDLLALTALKPPGEFGADIVVGS 351
            GDVCGVLVQYPGTEGEVLDYGEFIKKAHA+EVKVVMASDLLALT LKPPGEFGADIVVGS
Sbjct: 294  GDVCGVLVQYPGTEGEVLDYGEFIKKAHANEVKVVMASDLLALTVLKPPGEFGADIVVGS 353

Query: 352  AQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKSALRMAMQTREQHIRRDK 411
            AQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGK ALRMAMQTREQHIRRDK
Sbjct: 354  AQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDK 413

Query: 412  ATSNICTAQALLANMAAMYAVYHGPEGLKAISQRVHXXXXXXXXXXXXXXTVEVQDLPFF 471
            ATSNICTAQALLANMAAMYAVYHGPEGLKAI+QRVH              TVEVQD+ FF
Sbjct: 414  ATSNICTAQALLANMAAMYAVYHGPEGLKAIAQRVHGLAGVFALGLKKLGTVEVQDIGFF 473

Query: 472  DTVKVKTSNAHAIADAALKSEINLRVVDGNTITVAFDETITLEDVDKLFQVFAGGKPVSF 531
            DTVKVKTSNA AIADAA+K+EINLRVVDGNTIT AFDET TLEDVDKLF+VFAGGKPVSF
Sbjct: 474  DTVKVKTSNAKAIADAAVKNEINLRVVDGNTITAAFDETTTLEDVDKLFKVFAGGKPVSF 533

Query: 532  TSASLAPEVQSPIPSGLARESPFLTHPIFNTYQTEHELLRYIHRLQSKDLSLCHSMIPLG 591
            T+ASLAPE Q+ IPSGL RE+P+LTHPIFNTYQTEHELLRYIHRLQSKDLSLCHSMIPLG
Sbjct: 534  TAASLAPEFQNAIPSGLVRETPYLTHPIFNTYQTEHELLRYIHRLQSKDLSLCHSMIPLG 593

Query: 592  SCTMKLNATTEMMPVTWPSFTDIHPFAPVEQAQGYQEMFNNLGDLLCTITGFDSFSLQPN 651
            SCTMKLNATTEMMPVTWPSFTDIHPFAP EQAQGYQEMF+NLGDLLCTITGFDSFSLQPN
Sbjct: 594  SCTMKLNATTEMMPVTWPSFTDIHPFAPTEQAQGYQEMFDNLGDLLCTITGFDSFSLQPN 653

Query: 652  AGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNI 711
            AGAAGEYAGLMVIRAYH+SRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNI
Sbjct: 654  AGAAGEYAGLMVIRAYHMSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVTIGTDAKGNI 713

Query: 712  NIDELRTAAEKNKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG 771
            NI+EL+ AAE +KDNLSA MVTYPSTHGVYEEGID+ICKIIHDNGGQVYMDGANMNAQVG
Sbjct: 714  NIEELKKAAETHKDNLSAFMVTYPSTHGVYEEGIDDICKIIHDNGGQVYMDGANMNAQVG 773

Query: 772  LTSPGWIGADVCHLNLHKTFCIXXXXXXXXXXXXXVKQHLAPFLPSHPVIPTGGIPAPDN 831
            LTSPGWIGADVCHLNLHKTFCI             VK+HLAPFLPSHPV+PTGGIPAP+N
Sbjct: 774  LTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPEN 833

Query: 832  SQPLGTISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLENYYPVLFR 891
            +QPLG+ISAAPWGSALILPISYTYIAMMGS+GLTDASKIAILNANYMAKRLE+YYPVLFR
Sbjct: 834  AQPLGSISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLESYYPVLFR 893

Query: 892  GVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK 951
            GVNGT AHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK
Sbjct: 894  GVNGTCAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK 953

Query: 952  AELDRFCDALISIRQEIAEIEKGKADINNNVLKGAPHPPSLLMADAWTKPYSRECAAFPA 1011
            AELDRFCDALISIR+EIAEIEKG AD++NNVLKGAPHPPSLLMADAWTKPYSRE AAFPA
Sbjct: 954  AELDRFCDALISIRKEIAEIEKGNADVHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPA 1013

Query: 1012 SWLRVAKFWPTTGRVD 1027
             WLRVAKFWPT GRVD
Sbjct: 1014 PWLRVAKFWPTNGRVD 1029


>Medtr1g016280.1 | glycine dehydrogenase [decarboxylating] protein |
           HC | chr1:4298714-4299183 | 20130731
          Length = 87

 Score =  115 bits (287), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 59/69 (85%)

Query: 884 NYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMI 943
           +Y  +LF GVN TVAHEFI+DLRGF+NTAGIEPEDV KRLMD GFHGPT+S  VP TLMI
Sbjct: 13  SYSLILFCGVNETVAHEFIVDLRGFQNTAGIEPEDVVKRLMDNGFHGPTISLLVPDTLMI 72

Query: 944 EPTESESKA 952
           EPTESESK 
Sbjct: 73  EPTESESKV 81