Miyakogusa Predicted Gene

Lj5g3v0403740.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0403740.1 Non Characterized Hit- tr|I1M9C2|I1M9C2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,37.04,8e-19,seg,NULL,CUFF.52931.1
         (253 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g016270.1 | hypothetical protein | HC | chr1:4297451-42982...    99   5e-21
Medtr8g097140.1 | hypothetical protein | HC | chr8:34852431-3485...    77   2e-14

>Medtr1g016270.1 | hypothetical protein | HC |
          chr1:4297451-4298281 | 20130731
          Length = 276

 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/80 (61%), Positives = 62/80 (77%), Gaps = 2/80 (2%)

Query: 1  MKTIYGECLSFKEISLSKATKVISQFASADNGASEVVSAYLHRASASFVELNNLHKELKS 60
          MKTI G C S KEISLSKA+K++S+F SADNGAS V++AYL RAS +F ELN LHKELK 
Sbjct: 1  MKTITGHCESSKEISLSKASKILSKFVSADNGASHVINAYLLRASTAFNELNQLHKELKP 60

Query: 61 KK--RLKRQTETGEDSGRVI 78
           +  R  R++ T +DSGR++
Sbjct: 61 AQSHRKNRRSHTTDDSGRLV 80



 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 53/72 (73%), Gaps = 5/72 (6%)

Query: 173 QEQRKEIDKKLSNNIEGENGS-VGHQDLQNKKKKKYETESEDKLYAEDVKIEGKKKRKNE 231
           QEQ KE++KKLSN ++ E+G  VG QD++ + KKK+E  SE+KL+A + K E +KKRKNE
Sbjct: 197 QEQHKEVEKKLSNGVKSESGGLVGSQDVEIRSKKKHEAGSENKLHAGEEKTEQRKKRKNE 256

Query: 232 DLEWRQEDRSGE 243
           D     E+RSGE
Sbjct: 257 DA----EERSGE 264


>Medtr8g097140.1 | hypothetical protein | HC |
           chr8:34852431-34851080 | 20130731
          Length = 235

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 110/252 (43%), Gaps = 23/252 (9%)

Query: 3   TIYGECLSFKEISLSKATKVISQFASADNGASEVVSAYLHRASASFVELNNLHKELKSKK 62
            I   C S KEISLS+A K+ S F SADNGAS      L +    F  LN LHKELK  K
Sbjct: 2   PITRRCESSKEISLSRAAKIFSNFVSADNGASGGYDVILGKTFKGFNLLNQLHKELKLSK 61

Query: 63  --RLKRQTETGEDSGRVIGFGTQSFGSQNDGGDDEKSTQTKVNGTIGYEKVN--MNGGXX 118
             R  RQ+   +DS   +   ++      DG    KS Q  V       K N  +NG   
Sbjct: 62  SHRKNRQSHITDDS---VDVKSEKEFRNVDG----KSNQIDV-------KFNQEVNGFEQ 107

Query: 119 XXXXXXXXXXXXXXIHGDSILKSGEGEIDGKLTAMSPNXXXXXXXXXXXXXXXXQEQRKE 178
                          +G S+   G      K    +                  QEQ+KE
Sbjct: 108 PKETEKKISNNAKVENGVSVAPRGVEVRSKKRNEAASEVKMQRGKNSEVENAEGQEQQKE 167

Query: 179 IDKKLSNNIEGENGSVGHQDLQNKKKKKYETESEDKLYAEDVKIEGKKKRKNEDLEWRQE 238
           ++KK S  +    G +G  DL+ +  KK E  SE KLYA    +E +KKRK++D E R E
Sbjct: 168 VEKKPSTGV-NSGGPMGPLDLEIRTNKKIEAVSESKLYA----VEKRKKRKSQDGEERIE 222

Query: 239 DRSGELTQKRKK 250
              GE ++K+ K
Sbjct: 223 SSLGEHSKKKMK 234