Miyakogusa Predicted Gene
- Lj5g3v0402730.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0402730.1 tr|G7IB73|G7IB73_MEDTR Chloroplast unusual
positioning 1A OS=Medicago truncatula GN=MTR_1g016290
PE=,75.31,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
coiled-coil,NULL,CUFF.52928.1
(791 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g016290.1 | CHUP1 | HC | chr1:4303228-4308457 | 20130731 986 0.0
Medtr5g053270.1 | CHUP1 | HC | chr5:21962356-21968047 | 20130731 338 1e-92
Medtr4g087780.1 | hypothetical protein | HC | chr4:34535979-3453... 336 5e-92
Medtr1g093850.1 | CHUP1 | HC | chr1:42112497-42107561 | 20130731 325 9e-89
Medtr4g124070.2 | hydroxyproline-rich glycoprotein family protei... 290 6e-78
Medtr4g124070.1 | hydroxyproline-rich glycoprotein family protei... 290 6e-78
Medtr4g124070.3 | hydroxyproline-rich glycoprotein family protei... 290 6e-78
Medtr4g124070.5 | hydroxyproline-rich glycoprotein family protei... 290 6e-78
Medtr4g124070.4 | hydroxyproline-rich glycoprotein family protei... 290 6e-78
Medtr5g071840.1 | SKIP interacting protein, putative | HC | chr5... 258 1e-68
Medtr5g071817.1 | SKIP interacting protein, putative | HC | chr5... 235 1e-61
Medtr8g014900.1 | actin-binding family protein, putative | HC | ... 64 8e-10
Medtr2g100630.3 | CHUP1, putative | HC | chr2:43255814-43252954 ... 57 7e-08
Medtr2g100630.1 | CHUP1, putative | HC | chr2:43255686-43252954 ... 57 7e-08
Medtr2g100630.2 | CHUP1, putative | HC | chr2:43255686-43252954 ... 57 8e-08
Medtr4g089110.1 | hydroxyproline-rich glycoprotein family protei... 57 9e-08
Medtr0170s0030.1 | transmembrane protein, putative | HC | scaffo... 56 1e-07
Medtr2g013000.1 | hydroxyproline-rich glycoprotein family protei... 54 6e-07
>Medtr1g016290.1 | CHUP1 | HC | chr1:4303228-4308457 | 20130731
Length = 754
Score = 986 bits (2550), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 545/799 (68%), Positives = 603/799 (75%), Gaps = 53/799 (6%)
Query: 1 MKED--NNPLENRSKPSRFSDQNQPPQPKLQSSKGSSNMTNNNHSKPRLWGAHIVKGFSA 58
MKE+ NNP EN++K S+FSDQNQPP KLQ++K ++N NNNHSKPRLWGAHIVKGFSA
Sbjct: 1 MKEEIHNNPSENKTKVSKFSDQNQPP--KLQTTK-TTNPNNNNHSKPRLWGAHIVKGFSA 57
Query: 59 DKKTKNPQQSXXXXXXXXXXXXISDVVVTTQKNNNPFVPAHSRVKRSLIGDLSCSLNSQV 118
DKKTK Q SDVV T QKN NPFVP HSRVKRSL+GDLSCS QV
Sbjct: 58 DKKTK---QLPTKKQQNTTTITTSDVV-TNQKNVNPFVPPHSRVKRSLMGDLSCS---QV 110
Query: 119 HPHAFPSHRRQSSTDLFTELDHMRSLLQESKEREGKLNAELVECKGKQSXXXXXXXXXXX 178
HPHAFP+HRRQSSTDLFTELDHMRSLLQESKERE KLNAELVEC+ QS
Sbjct: 111 HPHAFPTHRRQSSTDLFTELDHMRSLLQESKEREAKLNAELVECRKNQSEVDELVKKVAL 170
Query: 179 XXXXXTSLNEQLGSLKSVLXXXXXXXXXXXXDFCSVQXXXXXXXXXXXXXXXXQMQKRNL 238
+ L+EQL +L S Q MQKRNL
Sbjct: 171 LEEEKSGLSEQLVALSRSCGLERQEEDKDG----STQNLELEVVELRRLNKELHMQKRNL 226
Query: 239 TCRLSSLEAQLPCPANSSESDIVAKIKAEASLLRHTNEDLSKQVEGLQTSRLNEVEELAY 298
TCRLSS+E+QL C NSSESDIVAK KAEASLLR TNEDLSKQVEGLQTSRLNEVEELAY
Sbjct: 227 TCRLSSMESQLSCSDNSSESDIVAKFKAEASLLRLTNEDLSKQVEGLQTSRLNEVEELAY 286
Query: 299 LRWVNSCLRNELKNTCSALESDKPSSPQSVMSNSGDDCVSSFSDQTNRYSKCSISTSRFS 358
LRWVNSCLR ELKNTCS L+SDK +S+ SS ++ +C S + F+
Sbjct: 287 LRWVNSCLRTELKNTCSTLDSDK-------LSSPQSVVSSSGDSISSFSDQCG-SANSFN 338
Query: 359 LIKKPKKWPITS-DHLSQLECPD-SLIEKNWIEPEVMGRSPSRRHSISGSNCSEEEI-LL 415
L+KKPKKWPITS D LSQ+EC + S+I+KNWIE G S RRHSISGSN SEEE+ +L
Sbjct: 339 LVKKPKKWPITSSDQLSQVECTNNSIIDKNWIESISEG-SNRRRHSISGSNSSEEEVSVL 397
Query: 416 NKRRQS---DIFVCSKEMEKDSVPLSVQSGLEIIQRPQCFGNFQEANKLLASSDVEKRAL 472
+KRRQS D F C KE+EK+SVP+ + +Q QC +EKRAL
Sbjct: 398 SKRRQSNCFDSFECLKEIEKESVPMPL-----FVQ--QCA--------------LEKRAL 436
Query: 473 RVPNPPPRPSSCSISNITKQESSAQVXXXXXXXXXXXXLNFASRSNSAMVKRAPQVVELY 532
R+PNPPPRPS CSIS+ TKQE SAQV ++FASR N+AMVKRAPQVVELY
Sbjct: 437 RIPNPPPRPS-CSISSKTKQECSAQVQPPPPPPPPPPPMSFASRGNTAMVKRAPQVVELY 495
Query: 533 HSLMKRDSRKDSSNGGLSDAPDVANVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIK 592
HSLMKRDSR+DSS+GGLSDAPDVA+VRSSMIGEIENRSSHLLAIKADIETQGEFVNSLI+
Sbjct: 496 HSLMKRDSRRDSSSGGLSDAPDVADVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIR 555
Query: 593 EVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFEWPEKKADTLREAAFGYQDLKKL 652
EV +AVY+NI+DVVAFVKWLDDEL FLVDERAVLKHF+WPEKKADTLREAAFGYQDLKKL
Sbjct: 556 EVNDAVYENIDDVVAFVKWLDDELGFLVDERAVLKHFDWPEKKADTLREAAFGYQDLKKL 615
Query: 653 ESEVSSYKDDPRIPCDIALKKMVALSEKMERTVYNLLRTRESLMRNCKDFQIPIEWMLDN 712
ESEVSSYKDDPR+PCDIALKKMVALSEKMERTVY LLRTR+SLMRNCK+FQIP+EWMLDN
Sbjct: 616 ESEVSSYKDDPRLPCDIALKKMVALSEKMERTVYTLLRTRDSLMRNCKEFQIPVEWMLDN 675
Query: 713 XXXXXXXXXSVKLAKNYMKRVAMELQAKSALDKDPAMDYMLLQGVRFAFRIHQFAGGFDA 772
SVKLAK YMKRVA+E+Q KSA DKDPAMDYM+LQGVRFAFRIHQFAGGFDA
Sbjct: 676 GIIGKIKLGSVKLAKKYMKRVAIEVQTKSAFDKDPAMDYMVLQGVRFAFRIHQFAGGFDA 735
Query: 773 ETMHAFEELRNLASLLNKT 791
ETMHAFEELRNLASLLNKT
Sbjct: 736 ETMHAFEELRNLASLLNKT 754
>Medtr5g053270.1 | CHUP1 | HC | chr5:21962356-21968047 | 20130731
Length = 997
Score = 338 bits (867), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 156/261 (59%), Positives = 205/261 (78%)
Query: 522 VKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVANVRSSMIGEIENRSSHLLAIKADIE 581
V RAPQ+VE Y SLMKR+++KD+S+ +S + ++ R++MIGEIENRS+ LLA+KAD+E
Sbjct: 716 VHRAPQLVEFYQSLMKREAKKDTSSLLVSSTGNTSDARNNMIGEIENRSTFLLAVKADVE 775
Query: 582 TQGEFVNSLIKEVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFEWPEKKADTLRE 641
TQG+FV SL EV+ + + +IED+VAFV WLD+EL FLVDERAVLKHF+WPE KAD LRE
Sbjct: 776 TQGDFVTSLATEVRASSFSDIEDLVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALRE 835
Query: 642 AAFGYQDLKKLESEVSSYKDDPRIPCDIALKKMVALSEKMERTVYNLLRTRESLMRNCKD 701
AAF YQDL KLE+ VS++ DDP++ C+ ALKKM +L EK+E++VY LLRTR+ + ++
Sbjct: 836 AAFEYQDLMKLENRVSTFVDDPKLSCEAALKKMYSLLEKVEQSVYALLRTRDMAISRYRE 895
Query: 702 FQIPIEWMLDNXXXXXXXXXSVKLAKNYMKRVAMELQAKSALDKDPAMDYMLLQGVRFAF 761
F IPI W+ D SV+LA+ YMKRVA EL A S +K+PA ++++LQGVRFAF
Sbjct: 896 FGIPINWLQDAGVVGKIKLSSVQLARKYMKRVASELDALSGPEKEPAREFLILQGVRFAF 955
Query: 762 RIHQFAGGFDAETMHAFEELR 782
R+HQFAGGFDAE+M AFE+LR
Sbjct: 956 RVHQFAGGFDAESMKAFEDLR 976
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 64/81 (79%)
Query: 232 QMQKRNLTCRLSSLEAQLPCPANSSESDIVAKIKAEASLLRHTNEDLSKQVEGLQTSRLN 291
Q +KR LT +L++ E+++ +N +E+++VAK K E S LRH NEDLSKQVEGLQ +R +
Sbjct: 281 QYEKRELTVKLNAAESRVAELSNMTETEMVAKAKEEVSNLRHANEDLSKQVEGLQMNRFS 340
Query: 292 EVEELAYLRWVNSCLRNELKN 312
EVEEL YLRWVN+CLR ELKN
Sbjct: 341 EVEELVYLRWVNACLRYELKN 361
>Medtr4g087780.1 | hypothetical protein | HC |
chr4:34535979-34531408 | 20130731
Length = 629
Score = 336 bits (862), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 162/268 (60%), Positives = 203/268 (75%), Gaps = 6/268 (2%)
Query: 520 AMVKRAPQVVELYHSLMKRDS--RKDSSNGGLSDAPDVANVRSSMIGEIENRSSHLLAIK 577
A V++ P+VVE YHSLM+RDS R++S++G ++ P AN R MIGEIENRS+HLLAIK
Sbjct: 345 AKVRKVPEVVEFYHSLMRRDSQTRRESNSGTAAEVPATANARD-MIGEIENRSTHLLAIK 403
Query: 578 ADIETQGEFVNSLIKEVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFEWPEKKAD 637
D+ETQG+F+ LIKEV+ A + +IEDVV FVKWLDDEL +LVDERAVLKHF+WPE+KAD
Sbjct: 404 TDVETQGDFIRYLIKEVEGAAFTDIEDVVPFVKWLDDELSYLVDERAVLKHFDWPEQKAD 463
Query: 638 TLREAAFGYQDLKKLESEVSSYKDDPRIPCDIALKKMVALSEKMERTVYNLLRTRESLMR 697
+REAAFGY DLKKLESE SS++DDPR C ALKKM L EK+E VYN+ R RES +
Sbjct: 464 AMREAAFGYCDLKKLESEASSFRDDPRQLCGPALKKMQTLFEKLEHGVYNISRMRESATK 523
Query: 698 NCKDFQIPIEWMLDNXXXXXXXXXSVKLAKNYMKRVAMELQAKSALDKDPAMDYMLLQGV 757
K FQIP++W+LD+ SVKLA YMKRV+ EL+ + P + +++QGV
Sbjct: 524 RFKVFQIPVDWLLDSGYATKIKLASVKLAMKYMKRVSAELE---TVGGGPEEEELIVQGV 580
Query: 758 RFAFRIHQFAGGFDAETMHAFEELRNLA 785
RFAFR+HQFA GFDA+TM AF+ELR+ A
Sbjct: 581 RFAFRVHQFASGFDADTMRAFQELRDKA 608
>Medtr1g093850.1 | CHUP1 | HC | chr1:42112497-42107561 | 20130731
Length = 992
Score = 325 bits (834), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 200/262 (76%), Gaps = 1/262 (0%)
Query: 522 VKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVANVRSSMIGEIENRSSHLLAIKADIE 581
VKRAP++VE Y SLMKR+++KD+S S + A+ RS++I EIENRSS LLA+KAD+E
Sbjct: 711 VKRAPELVEFYQSLMKREAKKDAS-LLTSSTSNAADTRSNVIAEIENRSSFLLAVKADVE 769
Query: 582 TQGEFVNSLIKEVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFEWPEKKADTLRE 641
TQG+FV SL EV+ A + IEDVVAFV WLD+EL FL DERAVLKHF+WPE K+D LRE
Sbjct: 770 TQGDFVMSLATEVRAASFSKIEDVVAFVNWLDEELSFLSDERAVLKHFDWPEGKSDALRE 829
Query: 642 AAFGYQDLKKLESEVSSYKDDPRIPCDIALKKMVALSEKMERTVYNLLRTRESLMRNCKD 701
A+F YQDL KLE +VS++ DDP++PC+ AL+KM +L EK+E++VY LLRTR+ + K+
Sbjct: 830 ASFEYQDLMKLEKQVSNFTDDPKLPCEDALQKMYSLLEKLEQSVYALLRTRDFAISRYKE 889
Query: 702 FQIPIEWMLDNXXXXXXXXXSVKLAKNYMKRVAMELQAKSALDKDPAMDYMLLQGVRFAF 761
F +P+ W+LD+ SV+LA YMKR+A E+ S + +P ++++LQGVRF+F
Sbjct: 890 FGVPVNWLLDSGVVGKIKLSSVQLANKYMKRIASEIDTLSGPENEPTREFLILQGVRFSF 949
Query: 762 RIHQFAGGFDAETMHAFEELRN 783
R+HQFAGGFD E+M AFEELRN
Sbjct: 950 RVHQFAGGFDTESMKAFEELRN 971
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 62/81 (76%)
Query: 232 QMQKRNLTCRLSSLEAQLPCPANSSESDIVAKIKAEASLLRHTNEDLSKQVEGLQTSRLN 291
Q +KR LT +L++ E+++ ++ +E++++A K+E LRH NEDL KQVEGLQ +R +
Sbjct: 300 QHEKRELTVKLNAAESRITELSSVTENEMIADAKSETGRLRHANEDLQKQVEGLQMNRFS 359
Query: 292 EVEELAYLRWVNSCLRNELKN 312
EVEEL YLRWVN+CLR EL+N
Sbjct: 360 EVEELVYLRWVNACLRYELRN 380
>Medtr4g124070.2 | hydroxyproline-rich glycoprotein family protein |
HC | chr4:51234990-51238821 | 20130731
Length = 574
Score = 290 bits (741), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 187/263 (71%)
Query: 520 AMVKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVANVRSSMIGEIENRSSHLLAIKAD 579
A ++AP VV+L+HSL +D++KD P + +S++GEI+NRS+HLLAI+ D
Sbjct: 292 ANTQKAPAVVQLFHSLKNQDTKKDLKGSINHQKPITNSAHNSIVGEIQNRSAHLLAIRED 351
Query: 580 IETQGEFVNSLIKEVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFEWPEKKADTL 639
I+T+GEF+N LI +V +A Y +IEDV+ FV WLD EL L DERAVLKHF+WPE+KADT+
Sbjct: 352 IQTKGEFINGLINKVVDASYVDIEDVLKFVDWLDGELSTLADERAVLKHFKWPERKADTM 411
Query: 640 REAAFGYQDLKKLESEVSSYKDDPRIPCDIALKKMVALSEKMERTVYNLLRTRESLMRNC 699
REAA Y++LK LE E+SSYKDDP IPC +LKK+ +L +K ER++ L+ R S++R+
Sbjct: 412 REAAVEYRELKMLEQEISSYKDDPDIPCVASLKKIASLLDKSERSIQKLIVLRNSVIRSY 471
Query: 700 KDFQIPIEWMLDNXXXXXXXXXSVKLAKNYMKRVAMELQAKSALDKDPAMDYMLLQGVRF 759
+ + IP WMLD+ S+ L K YMKR+ MEL++ D++ D +LLQGV F
Sbjct: 472 QMYNIPTAWMLDSGISSKIKQSSMTLVKMYMKRLTMELESIRNSDRESNQDSLLLQGVHF 531
Query: 760 AFRIHQFAGGFDAETMHAFEELR 782
A+R HQFAGG D+ET+ AFEE+R
Sbjct: 532 AYRAHQFAGGLDSETLCAFEEIR 554
>Medtr4g124070.1 | hydroxyproline-rich glycoprotein family protein |
HC | chr4:51228760-51238821 | 20130731
Length = 574
Score = 290 bits (741), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 187/263 (71%)
Query: 520 AMVKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVANVRSSMIGEIENRSSHLLAIKAD 579
A ++AP VV+L+HSL +D++KD P + +S++GEI+NRS+HLLAI+ D
Sbjct: 292 ANTQKAPAVVQLFHSLKNQDTKKDLKGSINHQKPITNSAHNSIVGEIQNRSAHLLAIRED 351
Query: 580 IETQGEFVNSLIKEVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFEWPEKKADTL 639
I+T+GEF+N LI +V +A Y +IEDV+ FV WLD EL L DERAVLKHF+WPE+KADT+
Sbjct: 352 IQTKGEFINGLINKVVDASYVDIEDVLKFVDWLDGELSTLADERAVLKHFKWPERKADTM 411
Query: 640 REAAFGYQDLKKLESEVSSYKDDPRIPCDIALKKMVALSEKMERTVYNLLRTRESLMRNC 699
REAA Y++LK LE E+SSYKDDP IPC +LKK+ +L +K ER++ L+ R S++R+
Sbjct: 412 REAAVEYRELKMLEQEISSYKDDPDIPCVASLKKIASLLDKSERSIQKLIVLRNSVIRSY 471
Query: 700 KDFQIPIEWMLDNXXXXXXXXXSVKLAKNYMKRVAMELQAKSALDKDPAMDYMLLQGVRF 759
+ + IP WMLD+ S+ L K YMKR+ MEL++ D++ D +LLQGV F
Sbjct: 472 QMYNIPTAWMLDSGISSKIKQSSMTLVKMYMKRLTMELESIRNSDRESNQDSLLLQGVHF 531
Query: 760 AFRIHQFAGGFDAETMHAFEELR 782
A+R HQFAGG D+ET+ AFEE+R
Sbjct: 532 AYRAHQFAGGLDSETLCAFEEIR 554
>Medtr4g124070.3 | hydroxyproline-rich glycoprotein family protein |
HC | chr4:51234956-51238821 | 20130731
Length = 573
Score = 290 bits (741), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 187/263 (71%)
Query: 520 AMVKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVANVRSSMIGEIENRSSHLLAIKAD 579
A ++AP VV+L+HSL +D++KD P + +S++GEI+NRS+HLLAI+ D
Sbjct: 291 ANTQKAPAVVQLFHSLKNQDTKKDLKGSINHQKPITNSAHNSIVGEIQNRSAHLLAIRED 350
Query: 580 IETQGEFVNSLIKEVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFEWPEKKADTL 639
I+T+GEF+N LI +V +A Y +IEDV+ FV WLD EL L DERAVLKHF+WPE+KADT+
Sbjct: 351 IQTKGEFINGLINKVVDASYVDIEDVLKFVDWLDGELSTLADERAVLKHFKWPERKADTM 410
Query: 640 REAAFGYQDLKKLESEVSSYKDDPRIPCDIALKKMVALSEKMERTVYNLLRTRESLMRNC 699
REAA Y++LK LE E+SSYKDDP IPC +LKK+ +L +K ER++ L+ R S++R+
Sbjct: 411 REAAVEYRELKMLEQEISSYKDDPDIPCVASLKKIASLLDKSERSIQKLIVLRNSVIRSY 470
Query: 700 KDFQIPIEWMLDNXXXXXXXXXSVKLAKNYMKRVAMELQAKSALDKDPAMDYMLLQGVRF 759
+ + IP WMLD+ S+ L K YMKR+ MEL++ D++ D +LLQGV F
Sbjct: 471 QMYNIPTAWMLDSGISSKIKQSSMTLVKMYMKRLTMELESIRNSDRESNQDSLLLQGVHF 530
Query: 760 AFRIHQFAGGFDAETMHAFEELR 782
A+R HQFAGG D+ET+ AFEE+R
Sbjct: 531 AYRAHQFAGGLDSETLCAFEEIR 553
>Medtr4g124070.5 | hydroxyproline-rich glycoprotein family protein |
HC | chr4:51228750-51238821 | 20130731
Length = 573
Score = 290 bits (741), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 187/263 (71%)
Query: 520 AMVKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVANVRSSMIGEIENRSSHLLAIKAD 579
A ++AP VV+L+HSL +D++KD P + +S++GEI+NRS+HLLAI+ D
Sbjct: 291 ANTQKAPAVVQLFHSLKNQDTKKDLKGSINHQKPITNSAHNSIVGEIQNRSAHLLAIRED 350
Query: 580 IETQGEFVNSLIKEVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFEWPEKKADTL 639
I+T+GEF+N LI +V +A Y +IEDV+ FV WLD EL L DERAVLKHF+WPE+KADT+
Sbjct: 351 IQTKGEFINGLINKVVDASYVDIEDVLKFVDWLDGELSTLADERAVLKHFKWPERKADTM 410
Query: 640 REAAFGYQDLKKLESEVSSYKDDPRIPCDIALKKMVALSEKMERTVYNLLRTRESLMRNC 699
REAA Y++LK LE E+SSYKDDP IPC +LKK+ +L +K ER++ L+ R S++R+
Sbjct: 411 REAAVEYRELKMLEQEISSYKDDPDIPCVASLKKIASLLDKSERSIQKLIVLRNSVIRSY 470
Query: 700 KDFQIPIEWMLDNXXXXXXXXXSVKLAKNYMKRVAMELQAKSALDKDPAMDYMLLQGVRF 759
+ + IP WMLD+ S+ L K YMKR+ MEL++ D++ D +LLQGV F
Sbjct: 471 QMYNIPTAWMLDSGISSKIKQSSMTLVKMYMKRLTMELESIRNSDRESNQDSLLLQGVHF 530
Query: 760 AFRIHQFAGGFDAETMHAFEELR 782
A+R HQFAGG D+ET+ AFEE+R
Sbjct: 531 AYRAHQFAGGLDSETLCAFEEIR 553
>Medtr4g124070.4 | hydroxyproline-rich glycoprotein family protein |
HC | chr4:51228776-51238821 | 20130731
Length = 573
Score = 290 bits (741), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 136/263 (51%), Positives = 187/263 (71%)
Query: 520 AMVKRAPQVVELYHSLMKRDSRKDSSNGGLSDAPDVANVRSSMIGEIENRSSHLLAIKAD 579
A ++AP VV+L+HSL +D++KD P + +S++GEI+NRS+HLLAI+ D
Sbjct: 291 ANTQKAPAVVQLFHSLKNQDTKKDLKGSINHQKPITNSAHNSIVGEIQNRSAHLLAIRED 350
Query: 580 IETQGEFVNSLIKEVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHFEWPEKKADTL 639
I+T+GEF+N LI +V +A Y +IEDV+ FV WLD EL L DERAVLKHF+WPE+KADT+
Sbjct: 351 IQTKGEFINGLINKVVDASYVDIEDVLKFVDWLDGELSTLADERAVLKHFKWPERKADTM 410
Query: 640 REAAFGYQDLKKLESEVSSYKDDPRIPCDIALKKMVALSEKMERTVYNLLRTRESLMRNC 699
REAA Y++LK LE E+SSYKDDP IPC +LKK+ +L +K ER++ L+ R S++R+
Sbjct: 411 REAAVEYRELKMLEQEISSYKDDPDIPCVASLKKIASLLDKSERSIQKLIVLRNSVIRSY 470
Query: 700 KDFQIPIEWMLDNXXXXXXXXXSVKLAKNYMKRVAMELQAKSALDKDPAMDYMLLQGVRF 759
+ + IP WMLD+ S+ L K YMKR+ MEL++ D++ D +LLQGV F
Sbjct: 471 QMYNIPTAWMLDSGISSKIKQSSMTLVKMYMKRLTMELESIRNSDRESNQDSLLLQGVHF 530
Query: 760 AFRIHQFAGGFDAETMHAFEELR 782
A+R HQFAGG D+ET+ AFEE+R
Sbjct: 531 AYRAHQFAGGLDSETLCAFEEIR 553
>Medtr5g071840.1 | SKIP interacting protein, putative | HC |
chr5:30556288-30553525 | 20130731
Length = 445
Score = 258 bits (660), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/268 (49%), Positives = 187/268 (69%), Gaps = 11/268 (4%)
Query: 522 VKRAPQVVELYHSLMKRDSR---KDSSNGGLSDAPDVANVRSSMIGEIENRSSHLLAIKA 578
V+R P+V+ELY SL ++D+ K NG P VA R+ MI EIENRS HL AIK+
Sbjct: 160 VRRVPEVIELYRSLTRKDANIENKTHHNG----IPAVAFTRN-MIEEIENRSKHLSAIKS 214
Query: 579 DIETQGEFVNSLIKEVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHF-EWPEKKAD 637
++++Q EF++ LIK+V++A Y +I +V F+KWLD EL LVDER+VLKHF +WPE+K D
Sbjct: 215 EVQSQKEFISFLIKQVESASYADISEVETFIKWLDGELSTLVDERSVLKHFPQWPEQKVD 274
Query: 638 TLREAAFGYQDLKKLESEVSSYKDDPRIPCDIALKKMVALSEKMERTVYNLLRTRESLMR 697
LREAA Y++LK LESEVSSY+D+P+ P +ALK++ AL +++E +V + R RES +
Sbjct: 275 ALREAACNYRELKNLESEVSSYEDNPKEPISMALKRIQALQDRLEGSVSSKERIRESSSK 334
Query: 698 NCKDFQIPIEWMLDNXXXXXXXXXSVKLAKNYMKRVAMELQAKSALDKDPAMDYMLLQGV 757
++F IP EWM+D S++LAK +MKR+ E+++ AL +D + +LLQGV
Sbjct: 335 KYRNFHIPWEWMMDTGLVGQIKLCSLRLAKEFMKRITKEIKSHEALHEDN--NNLLLQGV 392
Query: 758 RFAFRIHQFAGGFDAETMHAFEELRNLA 785
+FAFR+HQFAGGFD +T F EL+ +
Sbjct: 393 KFAFRVHQFAGGFDPDTTQTFLELKKVG 420
>Medtr5g071817.1 | SKIP interacting protein, putative | HC |
chr5:30515952-30513197 | 20130731
Length = 402
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/248 (49%), Positives = 174/248 (70%), Gaps = 11/248 (4%)
Query: 522 VKRAPQVVELYHSLMKRDSR---KDSSNGGLSDAPDVANVRSSMIGEIENRSSHLLAIKA 578
V+R P+V+ELY SL ++D+ K NG P VA R+ MI EIENRS HL AIK+
Sbjct: 160 VRRVPEVIELYRSLTRKDANIENKTHHNG----IPAVAFTRN-MIEEIENRSKHLSAIKS 214
Query: 579 DIETQGEFVNSLIKEVKNAVYQNIEDVVAFVKWLDDELCFLVDERAVLKHF-EWPEKKAD 637
++++Q EF++ LIK+V++A Y +I +V F+KWLD EL LVDER+VLKHF +WPE+K D
Sbjct: 215 EVQSQKEFISFLIKQVESASYADISEVETFIKWLDGELSTLVDERSVLKHFPQWPEQKVD 274
Query: 638 TLREAAFGYQDLKKLESEVSSYKDDPRIPCDIALKKMVALSEKMERTVYNLLRTRESLMR 697
LREAA Y++LK LESEVSSY+D+P+ P +ALK++ AL +++E +V + R RES +
Sbjct: 275 ALREAACNYRELKNLESEVSSYEDNPKEPISMALKRIQALQDRLEGSVSSKERIRESSSK 334
Query: 698 NCKDFQIPIEWMLDNXXXXXXXXXSVKLAKNYMKRVAMELQAKSALDKDPAMDYMLLQGV 757
++F IP EWM+D S++LAK +MKR+ E+++ AL +D + +LLQGV
Sbjct: 335 KYRNFHIPWEWMMDTGLVGQIKLCSLRLAKEFMKRITKEIKSHEALHEDN--NNLLLQGV 392
Query: 758 RFAFRIHQ 765
+FAFR+HQ
Sbjct: 393 KFAFRVHQ 400
>Medtr8g014900.1 | actin-binding family protein, putative | HC |
chr8:4761635-4765035 | 20130731
Length = 594
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 232 QMQKRNLTCRLSSLEAQLPCPANSSESDIVAKIKAEASLLRHTNEDLSKQVEGLQTSRLN 291
QM +L RL S + E+D ++ E+ LR NEDL+K++E L+ R
Sbjct: 294 QMDNSDLATRLDSTQILANSVLEDPEADA---LREESDRLRQANEDLTKEIEQLKADRCT 350
Query: 292 EVEELAYLRWVNSCLRNELKN 312
+VEEL YL+W+N+C R+EL+N
Sbjct: 351 DVEELVYLKWLNACFRHELRN 371
>Medtr2g100630.3 | CHUP1, putative | HC | chr2:43255814-43252954 |
20130731
Length = 544
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 267 EASLLRHTNEDLSKQVEGLQTSRLNEVEELAYLRWVNSCLRNELKN 312
E+ LR NE L KQ+E L + R +++EEL Y+RW+N+CLR EL+N
Sbjct: 316 ESECLRKENEGLMKQIEQLHSDRCSDLEELVYMRWINACLRYELRN 361
>Medtr2g100630.1 | CHUP1, putative | HC | chr2:43255686-43252954 |
20130731
Length = 544
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 267 EASLLRHTNEDLSKQVEGLQTSRLNEVEELAYLRWVNSCLRNELKN 312
E+ LR NE L KQ+E L + R +++EEL Y+RW+N+CLR EL+N
Sbjct: 316 ESECLRKENEGLMKQIEQLHSDRCSDLEELVYMRWINACLRYELRN 361
>Medtr2g100630.2 | CHUP1, putative | HC | chr2:43255686-43252954 |
20130731
Length = 503
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 267 EASLLRHTNEDLSKQVEGLQTSRLNEVEELAYLRWVNSCLRNELKN 312
E+ LR NE L KQ+E L + R +++EEL Y+RW+N+CLR EL+N
Sbjct: 275 ESECLRKENEGLMKQIEQLHSDRCSDLEELVYMRWINACLRYELRN 320
>Medtr4g089110.1 | hydroxyproline-rich glycoprotein family protein,
putative | HC | chr4:35745982-35742108 | 20130731
Length = 735
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 66/269 (24%)
Query: 522 VKRAPQVVELYHSLM----------------KRDSRKDSSNGGLSDAPDVANVRSSMIGE 565
+KR+ Q+ LY +L K+ + +SNGG D + E
Sbjct: 493 LKRSTQLGNLYRTLKGKVEGPSLTGKSAAAGKKSAIGGASNGGKQGMADA-------LAE 545
Query: 566 IENRSSHLLAIKADIETQGEFVNSLIKEVKNAVYQNIEDVVAFVKWLDDELCFLVDERAV 625
+ RSS+ + I+ D++ + + L + N +++ ++ F K ++ L L DE V
Sbjct: 546 MTKRSSYFIQIEEDVQKYTKQIIELRSRITNFKTKDMTELSKFHKDVESILENLTDESQV 605
Query: 626 LKHFE-WPEKKADTLREAAFGYQDLKKLESEVSSYKDDPRIPCDIALKKMVALSEKMERT 684
L FE +P KK + +R AA Y L + +E+ ++K + M L +K+ER
Sbjct: 606 LSRFEGFPTKKLEAIRMAASLYNKLDSILTELQNWK---------VVAPMGQLLDKVERY 656
Query: 685 VYNLLRTRESLMRNCKDFQIPIEWMLDNXXXXXXXXXSVKLAKNYMKRVAMELQAKSALD 744
F E M+D ++ N M+ V E + S +D
Sbjct: 657 -----------------FSKIKEAMVD-------------VSSNCMELVLKEKREDSKID 686
Query: 745 KDPAMD--YMLLQGVRFAFRIHQFAGGFD 771
P + ML + +F FR++ FAGG D
Sbjct: 687 -GPKKECAKMLWRAFQFTFRVYTFAGGLD 714
>Medtr0170s0030.1 | transmembrane protein, putative | HC |
scaffold0170:14845-11941 | 20130731
Length = 565
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 232 QMQKRNLTCRLSSLEAQLPCPANSSESDIVAKIKAEASLLRHTNEDLSKQVEGLQTSRLN 291
+++KR + +L++ A+ N SE V +I+ E + L+H +E LS+QVE LQ +R +
Sbjct: 234 ELEKREVGTKLATALAR-----NKSEETKVIQIQEEINDLQHVHEQLSEQVEILQRNRFD 288
Query: 292 EVEELAYLRWVNSCLRNELKN 312
V+EL Y RW+ CLR E+ N
Sbjct: 289 LVQELVYQRWLFICLRYEVNN 309
>Medtr2g013000.1 | hydroxyproline-rich glycoprotein family protein,
putative | HC | chr2:3422000-3424972 | 20130731
Length = 633
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 19/227 (8%)
Query: 548 GLSDAPDVANVRSSMIGEIENRSSHLLAIKADIETQGEFVNSLIKEVKNAVYQNIEDVVA 607
G++DA + E+ RSS+ I+ D++ + + L + N + + +++
Sbjct: 402 GMADA----------LAEMTKRSSYFQQIEEDVQKYTKHIIELRSSITNFKTKEMTELIK 451
Query: 608 FVKWLDDELCFLVDERAVLKHFE-WPEKKADTLREAAFGYQDLKKLESEVSSYKDDPRIP 666
F K ++ L DE VL FE +P KK + +R AA + L + +E+ + + P
Sbjct: 452 FHKEVESVFEKLTDESQVLSRFEGFPSKKLEAIRMAAALFNKLDSILNELQNV--NIVTP 509
Query: 667 CDIALKKMVALSEKMERTVYNLLRTRESLMRNCKDFQIPIEWMLDNXXXXXXXXXSVKLA 726
L K+ K++ + L RT++ ++ K I ++ + V ++
Sbjct: 510 VTQVLDKIERYFNKIKTELDALERTKDEELKKFKGHNIEFDFYI----LVKIKEAMVDVS 565
Query: 727 KNYMKRVAMELQAKSALD--KDPAMDYMLLQGVRFAFRIHQFAGGFD 771
N M+ E + ++ D + +L + +FAFR++ FAGG D
Sbjct: 566 SNCMELALKERRINNSSDGKRKECGGKLLWRAFQFAFRVYTFAGGHD 612