Miyakogusa Predicted Gene

Lj5g3v0391640.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0391640.2 Non Characterized Hit- tr|G7IB80|G7IB80_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,69.92,0,DUF1230,Uncharacterised protein family Ycf36;
Q9LYI9_ARATH_Q9LYI9;,Uncharacterised protein family Yc,CUFF.52920.2
         (271 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g016360.1 | DUF1230 family protein | HC | chr1:4337804-434...   340   1e-93
Medtr1g016360.3 | DUF1230 family protein | HC | chr1:4337811-434...   242   4e-64
Medtr1g016360.2 | DUF1230 family protein | HC | chr1:4337811-434...   206   2e-53
Medtr5g016100.1 | DUF1230 family protein | HC | chr5:5713781-571...   145   6e-35
Medtr5g016100.2 | DUF1230 family protein | HC | chr5:5714484-571...   122   3e-28

>Medtr1g016360.1 | DUF1230 family protein | HC |
           chr1:4337804-4341109 | 20130731
          Length = 252

 Score =  340 bits (871), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 168/211 (79%), Positives = 180/211 (85%), Gaps = 4/211 (1%)

Query: 61  FTSRNPTQCPVPREQQPVNEYQSLSTSFPFSWAAGDVVEYTSRLAVTGLSFAVFVGLPVA 120
            +SRN T+CPVP EQQP+NEYQSLSTSFPFSWAAGDVVEY SRL V G SFA+ VGLPVA
Sbjct: 45  LSSRNGTECPVPLEQQPINEYQSLSTSFPFSWAAGDVVEYGSRLFVVGFSFALLVGLPVA 104

Query: 121 LFGSVGSQSELLKRVLCAACSGVGAVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ 180
            FG+VG+Q E  KR++CAA SGV AVT AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ
Sbjct: 105 WFGTVGAQYEPAKRIVCAASSGVLAVTFAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ 164

Query: 181 VWVKTAEVLARDRLLGSFSVKPVLRRLKVTLVGLATCLLASALILINIDGYQNELNLRSN 240
           +WVKTAEVLARDRLLGSFSVKPVL RLK+TLVGLA CL+  ALI INID    E  L S 
Sbjct: 165 IWVKTAEVLARDRLLGSFSVKPVLSRLKITLVGLAACLVTCALIFINID----ESYLTSR 220

Query: 241 EAGVRVIPGVYNDESARSFEPDAFCGEPNLQ 271
           E GVR IPG YNDESARSFEPDAFCGEP+LQ
Sbjct: 221 ETGVRAIPGAYNDESARSFEPDAFCGEPDLQ 251


>Medtr1g016360.3 | DUF1230 family protein | HC |
           chr1:4337811-4340537 | 20130731
          Length = 193

 Score =  242 bits (617), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 117/144 (81%), Positives = 127/144 (88%)

Query: 61  FTSRNPTQCPVPREQQPVNEYQSLSTSFPFSWAAGDVVEYTSRLAVTGLSFAVFVGLPVA 120
            +SRN T+CPVP EQQP+NEYQSLSTSFPFSWAAGDVVEY SRL V G SFA+ VGLPVA
Sbjct: 45  LSSRNGTECPVPLEQQPINEYQSLSTSFPFSWAAGDVVEYGSRLFVVGFSFALLVGLPVA 104

Query: 121 LFGSVGSQSELLKRVLCAACSGVGAVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ 180
            FG+VG+Q E  KR++CAA SGV AVT AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ
Sbjct: 105 WFGTVGAQYEPAKRIVCAASSGVLAVTFAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ 164

Query: 181 VWVKTAEVLARDRLLGSFSVKPVL 204
           +WVKTAEVLARDRLLGSFSV  +L
Sbjct: 165 IWVKTAEVLARDRLLGSFSVSILL 188


>Medtr1g016360.2 | DUF1230 family protein | HC |
           chr1:4337811-4341109 | 20130731
          Length = 198

 Score =  206 bits (524), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 100/134 (74%), Positives = 112/134 (83%)

Query: 62  TSRNPTQCPVPREQQPVNEYQSLSTSFPFSWAAGDVVEYTSRLAVTGLSFAVFVGLPVAL 121
           +SRN T+CPVP EQQP+NEYQSLSTSFPFSWAAGDVVEY SRL V G SFA+ VGLPVA 
Sbjct: 46  SSRNGTECPVPLEQQPINEYQSLSTSFPFSWAAGDVVEYGSRLFVVGFSFALLVGLPVAW 105

Query: 122 FGSVGSQSELLKRVLCAACSGVGAVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQV 181
           FG+VG+Q E  KR++CAA SGV AVT AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQV
Sbjct: 106 FGTVGAQYEPAKRIVCAASSGVLAVTFAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQV 165

Query: 182 WVKTAEVLARDRLL 195
           ++      A+  +L
Sbjct: 166 FISLFVFKAKSWIL 179


>Medtr5g016100.1 | DUF1230 family protein | HC |
           chr5:5713781-5716307 | 20130731
          Length = 312

 Score =  145 bits (365), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 80/171 (46%), Positives = 109/171 (63%), Gaps = 5/171 (2%)

Query: 68  QCPVPREQQPVNEYQSLSTSFPFSWAAGDVVEYTSRLAVTGLSFAVF--VGLPVALFGSV 125
           +  VP EQ+PVNEY SL     +SW  G++   +  L + GL  AVF  +G P+A   S 
Sbjct: 68  EIEVPFEQRPVNEYSSLKDGMLYSW--GELGPGSFFLRLGGLWLAVFTVLGAPIAA-ASF 124

Query: 126 GSQSELLKRVLCAACSGVGAVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQVWVKT 185
               E L+ +L A    +  V+L V+R+YLGW+YVG+RLLSA + YEE+GWYDGQ+WVK 
Sbjct: 125 SPSREPLRFILAAGTGTLFIVSLIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKP 184

Query: 186 AEVLARDRLLGSFSVKPVLRRLKVTLVGLATCLLASALILINIDGYQNELN 236
            E+LARDRLLGS+ VKPV++ LK TLVG    L+   ++ I     +N L+
Sbjct: 185 PEILARDRLLGSYKVKPVVKLLKQTLVGTGALLVTGVMLFIFATPVENFLH 235


>Medtr5g016100.2 | DUF1230 family protein | HC |
           chr5:5714484-5716307 | 20130731
          Length = 225

 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 69/149 (46%), Positives = 96/149 (64%), Gaps = 5/149 (3%)

Query: 90  FSWAAGDVVEYTSRLAVTGLSFAVF--VGLPVALFGSVGSQSELLKRVLCAACSGVGAVT 147
           +SW  G++   +  L + GL  AVF  +G P+A   S     E L+ +L A    +  V+
Sbjct: 3   YSW--GELGPGSFFLRLGGLWLAVFTVLGAPIAA-ASFSPSREPLRFILAAGTGTLFIVS 59

Query: 148 LAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQVWVKTAEVLARDRLLGSFSVKPVLRRL 207
           L V+R+YLGW+YVG+RLLSA + YEE+GWYDGQ+WVK  E+LARDRLLGS+ VKPV++ L
Sbjct: 60  LIVLRIYLGWSYVGDRLLSAVIPYEESGWYDGQMWVKPPEILARDRLLGSYKVKPVVKLL 119

Query: 208 KVTLVGLATCLLASALILINIDGYQNELN 236
           K TLVG    L+   ++ I     +N L+
Sbjct: 120 KQTLVGTGALLVTGVMLFIFATPVENFLH 148