Miyakogusa Predicted Gene

Lj5g3v0391520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0391520.1 Non Characterized Hit- tr|D8L9Q6|D8L9Q6_WHEAT
Putative uncharacterized protein OS=Triticum aestivum
,30.57,0.0000000000002,seg,NULL,CUFF.52917.1
         (304 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g016410.1 | Myo28B1, putative | HC | chr1:4359856-4357284 ...   368   e-102
Medtr1g016410.2 | Myo28B1, putative | HC | chr1:4359449-4357285 ...   314   7e-86

>Medtr1g016410.1 | Myo28B1, putative | HC | chr1:4359856-4357284 |
           20130731
          Length = 306

 Score =  368 bits (945), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/319 (60%), Positives = 225/319 (70%), Gaps = 28/319 (8%)

Query: 1   MADKPSRSLVLFGDGLARSIDPXXXXXX--XXXXXXXCGFXX----XXXXXXXXXXDQRT 54
           MADKPSRSL+L+GDGLAR IDP               C F                D R 
Sbjct: 1   MADKPSRSLILYGDGLARFIDPSSSHTNLHSLASLSSCAFLTLSNSNSNFNPSETEDDRI 60

Query: 55  VREFAVLLDAPXXXXXXXXXXXXKDSPEKQTLPDRFMGMKAAILTNHSGLKSFSSKLGFN 114
           VREF +LLDA                 ++QTLPDRFMGMKAAI+TNHSGLKSFS+KLGF+
Sbjct: 61  VREFTLLLDASQIH-------------DEQTLPDRFMGMKAAIMTNHSGLKSFSTKLGFS 107

Query: 115 VLQLDALAKDYDAGLHENDVVALELLKLLGFQEGKVQDSNNFDLVFFHIGAGEK------ 168
           V+QLD L K + +   ++D+VA+E+LKLLGFQEGKV D++ FDLVF H+GAGEK      
Sbjct: 108 VVQLDGLVKQHASESQDSDIVAVEILKLLGFQEGKVLDNSQFDLVFIHVGAGEKDNGSEQ 167

Query: 169 --NVEYINALVGGLMNQAQPGSDISSRLHLSLVMSYGKVSEDDESKFSVSKRADEKXXXX 226
             +VE+++ALVG +M QAQPGSD+ SRLHLS+VMSYGKV EDDESKFSVSK+ DEK    
Sbjct: 168 NADVEFVDALVGAIMRQAQPGSDVGSRLHLSVVMSYGKVLEDDESKFSVSKKVDEKDSCF 227

Query: 227 XXXX-XXXXAMKGGFPRKDVRLHSPLLIAQWQDAVTRKDNAERFYFQDFMEHGGNLTIPA 285
                    AMKGG PRKDVRLHSP+LIAQ Q AVTRKDN +RF FQDFM++GGNLTIPA
Sbjct: 228 LTLYPLQSYAMKGGVPRKDVRLHSPMLIAQLQHAVTRKDNVQRFTFQDFMKNGGNLTIPA 287

Query: 286 DRFLHEIAFKLWKAPKYGA 304
           DRFLHEIAFK+WKAPKYGA
Sbjct: 288 DRFLHEIAFKMWKAPKYGA 306


>Medtr1g016410.2 | Myo28B1, putative | HC | chr1:4359449-4357285 |
           20130731
          Length = 223

 Score =  314 bits (804), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 155/223 (69%), Positives = 182/223 (81%), Gaps = 9/223 (4%)

Query: 91  MGMKAAILTNHSGLKSFSSKLGFNVLQLDALAKDYDAGLHENDVVALELLKLLGFQEGKV 150
           MGMKAAI+TNHSGLKSFS+KLGF+V+QLD L K + +   ++D+VA+E+LKLLGFQEGKV
Sbjct: 1   MGMKAAIMTNHSGLKSFSTKLGFSVVQLDGLVKQHASESQDSDIVAVEILKLLGFQEGKV 60

Query: 151 QDSNNFDLVFFHIGAGEKN--------VEYINALVGGLMNQAQPGSDISSRLHLSLVMSY 202
            D++ FDLVF H+GAGEK+        VE+++ALVG +M QAQPGSD+ SRLHLS+VMSY
Sbjct: 61  LDNSQFDLVFIHVGAGEKDNGSEQNADVEFVDALVGAIMRQAQPGSDVGSRLHLSVVMSY 120

Query: 203 GKVSEDDESKFSVSKRADEKXXXXXXXX-XXXXAMKGGFPRKDVRLHSPLLIAQWQDAVT 261
           GKV EDDESKFSVSK+ DEK             AMKGG PRKDVRLHSP+LIAQ Q AVT
Sbjct: 121 GKVLEDDESKFSVSKKVDEKDSCFLTLYPLQSYAMKGGVPRKDVRLHSPMLIAQLQHAVT 180

Query: 262 RKDNAERFYFQDFMEHGGNLTIPADRFLHEIAFKLWKAPKYGA 304
           RKDN +RF FQDFM++GGNLTIPADRFLHEIAFK+WKAPKYGA
Sbjct: 181 RKDNVQRFTFQDFMKNGGNLTIPADRFLHEIAFKMWKAPKYGA 223