Miyakogusa Predicted Gene

Lj5g3v0391500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0391500.1 CUFF.52935.1
         (500 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g079510.1 | nucleolar GTP-binding-like protein | HC | chr2...   907   0.0  
Medtr4g081850.1 | nucleolar GTP-binding-like protein | HC | chr4...   856   0.0  
Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |...   205   7e-53
Medtr4g050490.1 | P-loop nucleoside triphosphate hydrolase super...   128   1e-29
Medtr5g010400.1 | nucleolar GTP-binding protein, putative | HC |...   107   3e-23
Medtr7g094890.1 | ribosome biogenesis GTPase A | HC | chr7:37900...    74   2e-13
Medtr2g079540.1 | nucleolar GTP-binding-like protein, putative |...    74   3e-13
Medtr2g061470.1 | P-loop nucleoside triphosphate hydrolase super...    56   9e-08

>Medtr2g079510.1 | nucleolar GTP-binding-like protein | HC |
           chr2:33482137-33476593 | 20130731
          Length = 574

 Score =  907 bits (2345), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/502 (86%), Positives = 465/502 (92%), Gaps = 3/502 (0%)

Query: 1   MAKKKERKVNVSGKPKHSLDVNRSNDATKKEVRSAATVRRLKMYKSRPVRDKGGKILSHE 60
           M KKKER VN+SGKPKHS D NRSND +K E RSAATVRRLKMYK+RPVR++ G +LS+E
Sbjct: 1   MTKKKERNVNLSGKPKHSNDANRSND-SKTEKRSAATVRRLKMYKTRPVRNRKGHVLSNE 59

Query: 61  LQSKELPSTRIQPDRRWFANTRVVNQKELEFFREELQTRMSSNYNVILQEKKLPLSLLND 120
            QSK+LP TRI+PDR+WF NTRVVNQKELEFFREE+    +SNYN+IL+ K LP+SLLND
Sbjct: 60  YQSKDLPCTRIKPDRQWFGNTRVVNQKELEFFREEMAKHSASNYNIILKGKNLPMSLLND 119

Query: 121 HQKQSRVHLLDRQPFTDAFGPKTKRKRPGLLASDYESLAKKADDSHEAFEEKYGSSGTAE 180
           +QKQSRVHLLDR+PF+DAFGPKTKRKRP LLASDYESLAKKAD S +AFEEK+ S   AE
Sbjct: 120 YQKQSRVHLLDREPFSDAFGPKTKRKRPSLLASDYESLAKKADGSQDAFEEKHASGTAAE 179

Query: 181 ADEADGFRDLVRHNMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLK 240
           ADEADGFRDLVRH MFEKGQSKRIWGELYKVIDSSDVVVQV+DARDPQGTRCYHLEKHLK
Sbjct: 180 ADEADGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVIDARDPQGTRCYHLEKHLK 239

Query: 241 ENCKYKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFA 300
           ENCK+KHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFA
Sbjct: 240 ENCKHKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFA 299

Query: 301 RLKTDKQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDC 360
           RLK+DKQAISVGF+GYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDC
Sbjct: 300 RLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDC 359

Query: 361 PGVVYQNKDTETDVVLKGVVRVTNLKDAADHIGEVLKRVKLEHLQRAYRIQEWVDENDFL 420
           PGVVY N D+ETDVVLKGVVRVTNLKDAADHIGEVLKRVK EHL RAY+I+EWVDENDFL
Sbjct: 360 PGVVYHNNDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKEHLTRAYKIKEWVDENDFL 419

Query: 421 LQLCKSTGKLLKGGEPDLMTAAKMVLHDWQRGKIPFFVPPPRLDDL--SEEPNVNGIDVA 478
           LQLCKS+GKLLKGGEPDLMTAAKM+LHDWQRGKIPFFVPPPR D L  SEEPNVNGIDV 
Sbjct: 420 LQLCKSSGKLLKGGEPDLMTAAKMILHDWQRGKIPFFVPPPRQDALSESEEPNVNGIDVD 479

Query: 479 DGVDSNQASAAIKAIANVLSSQ 500
           + VD NQASAAIKAIANVLSSQ
Sbjct: 480 EAVDHNQASAAIKAIANVLSSQ 501


>Medtr4g081850.1 | nucleolar GTP-binding-like protein | HC |
           chr4:31881653-31883769 | 20130731
          Length = 563

 Score =  856 bits (2211), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/512 (82%), Positives = 451/512 (88%), Gaps = 21/512 (4%)

Query: 1   MAKKKERKVNVSGKPKHSLDVNRSNDATKKEVRSAATVRRLKMYKSRPVRDKGGKILSHE 60
           M KK+ER VNVSGKPKHS D NRSND TK E RSAATVRRLKMY ++PVR++ G++L   
Sbjct: 1   MVKKRERSVNVSGKPKHSNDANRSND-TKNESRSAATVRRLKMYNTKPVRNRKGRVLYEP 59

Query: 61  LQSKELPSTRIQPDRRWFANTRVVNQKELEFFREELQTRMSSNYNVILQEKKLPLSLLND 120
            Q   LPSTRI+PD +WF NTRVVNQKELEFFREE+    SSNYNV++  K LP+SLLND
Sbjct: 60  FQLPYLPSTRIKPDSQWFGNTRVVNQKELEFFREEMAKHGSSNYNVVINGKNLPMSLLND 119

Query: 121 HQKQSRVHLLDRQPFTDAFGPKTKRKRPGLLASDYESLAKKADDSHEAFEEKYGSSGTAE 180
           +QKQSRVHLLDR+PF  AFGPKTKRKRP LLASDYESLAKKAD S +AFE+        E
Sbjct: 120 YQKQSRVHLLDREPFLHAFGPKTKRKRPSLLASDYESLAKKADVSQDAFED------GNE 173

Query: 181 ADEADGFRDLVRHNMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLK 240
           AD  DGFRDLVRH MFEKGQSKRIWGELYKVIDSSDVVVQV+DARDPQGTRCYHLEKHLK
Sbjct: 174 AD--DGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVIDARDPQGTRCYHLEKHLK 231

Query: 241 ENCKYKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSVLRQFA 300
           ENCK+KHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLS+LRQFA
Sbjct: 232 ENCKHKHMVLLLNKCDLIPAWATKGWLRVLSKEYPTLAFHASINKSFGKGSLLSILRQFA 291

Query: 301 RLKTDKQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDC 360
           RLK+DKQAISVGF+GYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDC
Sbjct: 292 RLKSDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDC 351

Query: 361 PGVVYQNKDTETDVVLKGVVRVTNLKDAADHIGEVLKRVKLEHLQRAYRIQEWVDENDFL 420
           PGVVY N D+ETDVVLKGVVRVTNLKDAADHIGEVLKRVK EHL RAY+I+EWVDENDFL
Sbjct: 352 PGVVYHNNDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKEHLTRAYKIKEWVDENDFL 411

Query: 421 LQLCKSTGKLLKGGEPDLMTAAKMVLHDWQRGKIPFFVPPPRLDDL--SEEPNVNGID-- 476
           LQLCKS+GKLLKGGEPDLMTAAKM+LHDWQRGKIPFFVPPPRL+DL  SEEPNVNGID  
Sbjct: 412 LQLCKSSGKLLKGGEPDLMTAAKMILHDWQRGKIPFFVPPPRLEDLSKSEEPNVNGIDVD 471

Query: 477 --------VADGVDSNQASAAIKAIANVLSSQ 500
                   V + VD  QASAAIKAIANVLSSQ
Sbjct: 472 EANVNGIAVDEAVDHYQASAAIKAIANVLSSQ 503


>Medtr1g048030.1 | guanine nucleotide-binding-like protein | HC |
           chr1:18178595-18172713 | 20130731
          Length = 599

 Score =  205 bits (522), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 184/340 (54%), Gaps = 36/340 (10%)

Query: 158 LAKKADDSHE-AFEEKYG---------SSGTAEADEADGFRDLVRHNMFEKGQSKRIW-G 206
           LAKK D+  E A + K G         S  TA  +  +    + + N   K  S R + G
Sbjct: 78  LAKKKDERKERARKRKAGLPVDDDNSNSVETASIENTESVPTVAKTN---KDSSDRAFAG 134

Query: 207 ELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKYKHMVLLLNKCDLIPAWATKGW 266
           +L  VI +SDV+++VLDARDP GTRC ++EK ++++  YK  VLLLNK DL+P  + + W
Sbjct: 135 DLEAVIATSDVILEVLDARDPLGTRCVNIEKRVRDSGTYKRHVLLLNKIDLVPRESVEKW 194

Query: 267 LRVLSKEYPTLAFHAS---------------------INKSFGKGSLLSVLRQFARLKTD 305
           L+ L +E+PT+AF  S                     ++   G  +LL +L+ +AR    
Sbjct: 195 LKYLREEFPTVAFKCSTQQQKSNLGRSKKIKTSNTLQLSDCLGAETLLKLLKNYARSDKL 254

Query: 306 KQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVY 365
           K +I+VG +G PNVGKSS+IN+L   +   V+   G T+  Q I L K + L+DCPGVV 
Sbjct: 255 KTSITVGLVGLPNVGKSSLINSLMRSHAVHVSASAGSTRSKQEIRLDKNVKLLDCPGVVM 314

Query: 366 -QNKDTETDVVLKGVVRVTNLKDAADHIGEVLKRVKLEHLQRAYRIQEWVDENDFLLQLC 424
             +++ +  + LK   R+  L D    + E+LK      L   Y+I  +   +DFL  + 
Sbjct: 315 LDSRENDATIALKNCKRIEKLADPVSPVKEILKLCPARVLISLYKIPSFDSVDDFLQIVA 374

Query: 425 KSTGKLLKGGEPDLMTAAKMVLHDWQRGKIPFFVPPPRLD 464
              GKL KGG  D+  AA++VLHDW  GKIP++  PP  D
Sbjct: 375 TVRGKLKKGGIVDIDAAARIVLHDWNIGKIPYYTMPPVRD 414


>Medtr4g050490.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr4:17882585-17887926 |
           20130731
          Length = 589

 Score =  128 bits (322), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 171/370 (46%), Gaps = 80/370 (21%)

Query: 196 FEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKYKHMVLLLNKC 255
           FEK     IW +L++V++ SD++V V+D+RDP   RC  LE + KE   +K+ +LL+NK 
Sbjct: 152 FEKNLD--IWRQLWRVVERSDLLVMVVDSRDPLFYRCPDLEAYAKEVDVHKNTLLLVNKA 209

Query: 256 DLIPA-------------------WATKGWLRVL------SKEYPTLAFHASIN-KSFGK 289
           DL+PA                   W+ K    VL      S +   +A   + + K +G+
Sbjct: 210 DLLPASVREKWAEYFRAHDILFIFWSAKAATAVLEGKKLGSSQADNMASADNPDTKIYGR 269

Query: 290 GSLLSVLRQFARLKTDKQAI--------------------------SVGFIGYPNVGKSS 323
             LL      ARL+++ +AI                           VGF+GYPNVGKSS
Sbjct: 270 DELL------ARLQSEAEAIVDMRRSSGSSKSSDDNASVSSSSSHVVVGFVGYPNVGKSS 323

Query: 324 VINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQN-KDTETDVVLKGVVRV 382
            IN L  +    V   PG+TK +Q + +++++ L DCPG+V+ +   +  +++  GV+ +
Sbjct: 324 TINALVGQKKTGVTSTPGKTKHFQTLIISEKLILCDCPGLVFPSFSSSRYEMITCGVLPI 383

Query: 383 TNLKDAADHIGEVLKRVKLEHLQRAYRI-----QEWVDE------NDFLLQLCKSTGKLL 431
             +    + +  V  RV    ++  Y I     + +  +      ++ L   C S G+  
Sbjct: 384 DRMTQHRECVQVVANRVPRHVIEEIYNISLPKPKSYESQSRPPLASELLRTYCASRGQTT 443

Query: 432 KGGEPDLMTAAKMVLHDWQRGKIPFFVPPPRL-------DDLSEEPNVNGIDVADGVDSN 484
             G PD   A++ +L D+  GK+P +  PP L       +D +E   VN   V+D  D  
Sbjct: 444 SSGLPDETRASRQILKDYIDGKLPHYEMPPGLSTQELASEDSNEHDQVNP-HVSDASDIE 502

Query: 485 QASAAIKAIA 494
            +S     +A
Sbjct: 503 DSSVVETELA 512


>Medtr5g010400.1 | nucleolar GTP-binding protein, putative | HC |
          chr5:2772264-2772521 | 20130731
          Length = 85

 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/73 (71%), Positives = 62/73 (84%), Gaps = 1/73 (1%)

Query: 7  RKVNVSGKPKHSLDVNRSNDATKKEVRSAATVRRLKMYKSRPVRDKGGKILSHELQSKEL 66
          RK+NV GKPKHSLDVNRSN   KKE RSAAT+RRLKMY+++PVR++ GK+L +E QSK+L
Sbjct: 14 RKINVFGKPKHSLDVNRSN-VVKKEWRSAATIRRLKMYRTKPVRNRKGKVLHNEFQSKDL 72

Query: 67 PSTRIQPDRRWFA 79
          PSTRIQ D RWF 
Sbjct: 73 PSTRIQSDPRWFG 85


>Medtr7g094890.1 | ribosome biogenesis GTPase A | HC |
           chr7:37900080-37894545 | 20130731
          Length = 373

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 144/334 (43%), Gaps = 35/334 (10%)

Query: 151 LASDYESLAKKADDSHEAFEEKYGSS-GTAEADEADGFRDLVRHNMFEKGQSKRIWGELY 209
           L S Y ++    +++ +  E   G+   T    +   +  ++R   +  G   +   EL 
Sbjct: 53  LQSQYPTIQIIGNNTFDGSEGGTGTDLWTGLDTDLYHWTKVLRPVQWFPGHIAKAEKELK 112

Query: 210 KVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKYKHMVLLLNKCDLIPAWATKGWLRV 269
           + +   DVV++V D R P  T    ++  L      K  +L+LN+ D+I       W   
Sbjct: 113 EQLKLMDVVIEVRDGRIPLSTSHPQMDLWLGN----KKRILVLNREDMISTADRNAWAEY 168

Query: 270 LSKEYPTLAFHASINKSFGKGSLLSVLRQFARLKTD-----------KQAISVGFIGYPN 318
            ++    + F    N   G G+L  + R    L  D            + +  G +GYPN
Sbjct: 169 FTRHGTKVVFS---NGQLGMGTL-KLCRLAKELAADVNVKRRAKGLLPRPVRAGIVGYPN 224

Query: 319 VGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYQNKDTETDVVLKG 378
           VGKSS+IN L  + +C  AP PG T+  +++   K + L+D PG++      ++  +   
Sbjct: 225 VGKSSLINRLLKRRMCPAAPRPGVTRDLRWVRFGKDLELLDSPGILPMRISDQSAAIKLA 284

Query: 379 VV-----RVTNLKDAADHIGEVLKR---VKLEHLQRAYRIQEWVDENDFLLQLCKSTGKL 430
           +      R  ++ D A  + ++L +   V  + L + Y+ +  VD     + + K    L
Sbjct: 285 ICDDIGERSYDVADVAAILVQMLTKLPAVGRDALCKRYKFR--VDSECGKIFIEKLALHL 342

Query: 431 LKGGEPDLMTAAKMVLHDWQRGKIPF--FVPPPR 462
             G   D+  AA  VL D+++G+  +     PPR
Sbjct: 343 FNG---DVHQAAYRVLSDFRKGRFGWTSLERPPR 373


>Medtr2g079540.1 | nucleolar GTP-binding-like protein, putative |
          HC | chr2:33493413-33493216 | 20130731
          Length = 65

 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/45 (86%), Positives = 41/45 (91%), Gaps = 1/45 (2%)

Query: 7  RKVNVSGKPKHSLDVNRSNDATKKEVRSAATVRRLKMYKSRPVRD 51
          RKVNVSGKPKHSLDVNRSN ATKK  RSAATVRRLKMYKS+PV +
Sbjct: 15 RKVNVSGKPKHSLDVNRSNVATKKS-RSAATVRRLKMYKSKPVHN 58


>Medtr2g061470.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr2:26052534-26057259 |
           20130731
          Length = 375

 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 26/166 (15%)

Query: 216 DVVVQVLDARDPQGTRCYHLEKHLKENCKYKHMVLLLNKCDLIPAWATKGWLRVLSKEYP 275
           D++V V DAR P  ++C HL  H        + +++LNK DL    + + W+    +   
Sbjct: 51  DLIVHVTDARIPFSSQC-HLLTH--------NHIIVLNKADLASRSSLQVWMDYFRETNC 101

Query: 276 TLAFHASINKSFGKGSLLSVLRQFARLKTDKQA----ISVGFIGYPNVGKSSVINTL--- 328
                 + NK   +  L  + RQ  +L+   QA     +V  IG PNVGKS++ N L   
Sbjct: 102 VSCGVDAHNKESIRQFLSLIQRQVGKLRRTDQANKYTATVMLIGLPNVGKSALTNALHHV 161

Query: 329 -RTKNVCK-------VAPIPGETK-VWQY-ITLTKRIFLIDCPGVV 364
            R     K       V+P PGETK +  Y I     I+++D P V+
Sbjct: 162 GRISAAEKGKLKHATVSPEPGETKDIRSYKIASHPNIYVLDTPAVL 207