Miyakogusa Predicted Gene
- Lj5g3v0381140.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0381140.2 Non Characterized Hit- tr|C6T7K8|C6T7K8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51862 PE,92.42,0,POLLEN
SPECIFIC PROTEIN SF21,Pollen specific protein SF21; N-MYC DOWNSTREAM
REGULATED,Ndr; alpha/bet,CUFF.52921.2
(212 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g016510.1 | pollen-specific SF21-like protein | HC | chr1:... 363 e-101
Medtr8g101710.1 | pollen-specific SF21-like protein | HC | chr8:... 334 3e-92
Medtr1g081240.1 | pollen-specific SF21-like protein | HC | chr1:... 286 7e-78
Medtr1g081240.2 | pollen-specific SF21-like protein | HC | chr1:... 286 1e-77
Medtr8g101710.2 | pollen-specific SF21-like protein | HC | chr8:... 261 5e-70
>Medtr1g016510.1 | pollen-specific SF21-like protein | HC |
chr1:4421553-4416255 | 20130731
Length = 349
Score = 363 bits (932), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/211 (81%), Positives = 184/211 (87%)
Query: 1 MCMGVTAGAYILTLFAMKYRERVLGLILVSPLCKAPSWTEWLYNKVLSNLLYFYGMCGVV 60
MCMGVTAGAYILTLFAMKYR+RVLGLILVSPLCK PSW+EWLYNKV+SNLLYFYGMCGVV
Sbjct: 123 MCMGVTAGAYILTLFAMKYRQRVLGLILVSPLCKEPSWSEWLYNKVMSNLLYFYGMCGVV 182
Query: 61 KEILLKRYFSKEVRGSGNLPELDIVQACRRSLDERQSLNVWRFLEAINGRSDISEGLRKL 120
KEILLKRYFSKE+RG PE DIV+ACRRSLDERQSLNVWRFLEAINGR D+SEGLR L
Sbjct: 183 KEILLKRYFSKEIRGGTQFPESDIVKACRRSLDERQSLNVWRFLEAINGRPDLSEGLRNL 242
Query: 121 QCRSLIFVGDMSPFHSEALHMNSKLDRRFSALVEVQACGSMVTEEQPHAMLVPMEYFLMG 180
CRSLIFVGDMSP+HSE+LH+ KLDRRFSALVEVQACGSMVTEEQPHAML+PMEYFLMG
Sbjct: 243 HCRSLIFVGDMSPYHSESLHITKKLDRRFSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 302
Query: 181 YGLYXXXXXXXXXXXXXXXXCISPELYSPEN 211
YGLY CISPEL+SPE+
Sbjct: 303 YGLYRPSRKSVSPRSPLSPSCISPELFSPES 333
>Medtr8g101710.1 | pollen-specific SF21-like protein | HC |
chr8:42762703-42766823 | 20130731
Length = 347
Score = 334 bits (857), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 159/211 (75%), Positives = 178/211 (84%)
Query: 1 MCMGVTAGAYILTLFAMKYRERVLGLILVSPLCKAPSWTEWLYNKVLSNLLYFYGMCGVV 60
MCMGVTAGAYILTLFAMKYR RV+GLILVSPLCKAPSWTEW YNKV+SNLL+FYGMCG++
Sbjct: 121 MCMGVTAGAYILTLFAMKYRNRVVGLILVSPLCKAPSWTEWFYNKVMSNLLHFYGMCGLL 180
Query: 61 KEILLKRYFSKEVRGSGNLPELDIVQACRRSLDERQSLNVWRFLEAINGRSDISEGLRKL 120
KE LL+RYFSKEVRG+ +PE +IVQACR+ LDER+ NV RFL+AI+ R DI+EGL KL
Sbjct: 181 KECLLQRYFSKEVRGNVEVPESEIVQACRKLLDERKKTNVLRFLQAIDQRPDITEGLEKL 240
Query: 121 QCRSLIFVGDMSPFHSEALHMNSKLDRRFSALVEVQACGSMVTEEQPHAMLVPMEYFLMG 180
CR+LIFVGD SPFHSEA+HM SKLDRR+SALVEVQACGSMVTEEQPHAML+PMEYFLMG
Sbjct: 241 NCRTLIFVGDSSPFHSEAIHMTSKLDRRYSALVEVQACGSMVTEEQPHAMLIPMEYFLMG 300
Query: 181 YGLYXXXXXXXXXXXXXXXXCISPELYSPEN 211
YGLY CISPEL SPE+
Sbjct: 301 YGLYRPCKFSHSPRSPLSPSCISPELLSPES 331
>Medtr1g081240.1 | pollen-specific SF21-like protein | HC |
chr1:36152313-36148396 | 20130731
Length = 354
Score = 286 bits (733), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 130/184 (70%), Positives = 159/184 (86%)
Query: 1 MCMGVTAGAYILTLFAMKYRERVLGLILVSPLCKAPSWTEWLYNKVLSNLLYFYGMCGVV 60
MC+GVTAGAYILTLFAMKY+ERVLGLILVSP+CK PSWTEW+YNKVL NLLYFYGMCG++
Sbjct: 121 MCLGVTAGAYILTLFAMKYKERVLGLILVSPICKGPSWTEWIYNKVLMNLLYFYGMCGLL 180
Query: 61 KEILLKRYFSKEVRGSGNLPELDIVQACRRSLDERQSLNVWRFLEAINGRSDISEGLRKL 120
KE LL+RYFSKE+R S E D++Q CRR LDERQSLNV RFL+A+N R D+SEGL+ L
Sbjct: 181 KECLLQRYFSKELRCSIQGAESDVIQTCRRLLDERQSLNVMRFLQAVNARHDLSEGLKNL 240
Query: 121 QCRSLIFVGDMSPFHSEALHMNSKLDRRFSALVEVQACGSMVTEEQPHAMLVPMEYFLMG 180
QC++LIF GD SPFH+E+++M+ K+D + ALVEVQACGS+VTEE P +M+VP+E FLMG
Sbjct: 241 QCKTLIFAGDSSPFHAESIYMSEKIDSKICALVEVQACGSLVTEEHPISMIVPIERFLMG 300
Query: 181 YGLY 184
+G +
Sbjct: 301 FGFH 304
>Medtr1g081240.2 | pollen-specific SF21-like protein | HC |
chr1:36151859-36148396 | 20130731
Length = 284
Score = 286 bits (732), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 130/184 (70%), Positives = 159/184 (86%)
Query: 1 MCMGVTAGAYILTLFAMKYRERVLGLILVSPLCKAPSWTEWLYNKVLSNLLYFYGMCGVV 60
MC+GVTAGAYILTLFAMKY+ERVLGLILVSP+CK PSWTEW+YNKVL NLLYFYGMCG++
Sbjct: 51 MCLGVTAGAYILTLFAMKYKERVLGLILVSPICKGPSWTEWIYNKVLMNLLYFYGMCGLL 110
Query: 61 KEILLKRYFSKEVRGSGNLPELDIVQACRRSLDERQSLNVWRFLEAINGRSDISEGLRKL 120
KE LL+RYFSKE+R S E D++Q CRR LDERQSLNV RFL+A+N R D+SEGL+ L
Sbjct: 111 KECLLQRYFSKELRCSIQGAESDVIQTCRRLLDERQSLNVMRFLQAVNARHDLSEGLKNL 170
Query: 121 QCRSLIFVGDMSPFHSEALHMNSKLDRRFSALVEVQACGSMVTEEQPHAMLVPMEYFLMG 180
QC++LIF GD SPFH+E+++M+ K+D + ALVEVQACGS+VTEE P +M+VP+E FLMG
Sbjct: 171 QCKTLIFAGDSSPFHAESIYMSEKIDSKICALVEVQACGSLVTEEHPISMIVPIERFLMG 230
Query: 181 YGLY 184
+G +
Sbjct: 231 FGFH 234
>Medtr8g101710.2 | pollen-specific SF21-like protein | HC |
chr8:42762734-42766808 | 20130731
Length = 282
Score = 261 bits (666), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 122/155 (78%), Positives = 139/155 (89%)
Query: 1 MCMGVTAGAYILTLFAMKYRERVLGLILVSPLCKAPSWTEWLYNKVLSNLLYFYGMCGVV 60
MCMGVTAGAYILTLFAMKYR RV+GLILVSPLCKAPSWTEW YNKV+SNLL+FYGMCG++
Sbjct: 121 MCMGVTAGAYILTLFAMKYRNRVVGLILVSPLCKAPSWTEWFYNKVMSNLLHFYGMCGLL 180
Query: 61 KEILLKRYFSKEVRGSGNLPELDIVQACRRSLDERQSLNVWRFLEAINGRSDISEGLRKL 120
KE LL+RYFSKEVRG+ +PE +IVQACR+ LDER+ NV RFL+AI+ R DI+EGL KL
Sbjct: 181 KECLLQRYFSKEVRGNVEVPESEIVQACRKLLDERKKTNVLRFLQAIDQRPDITEGLEKL 240
Query: 121 QCRSLIFVGDMSPFHSEALHMNSKLDRRFSALVEV 155
CR+LIFVGD SPFHSEA+HM SKLDRR+SALVEV
Sbjct: 241 NCRTLIFVGDSSPFHSEAIHMTSKLDRRYSALVEV 275