Miyakogusa Predicted Gene

Lj5g3v0358770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0358770.1 Non Characterized Hit- tr|I3S858|I3S858_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,DUF866,Protein of unknown function DUF866, eukaryotic;
MAL13P1.257-like,NULL; SUBFAMILY NOT NAMED,NU,CUFF.52883.1
         (166 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g016900.1 | UPF0587 C1orf123-like protein | HC | chr1:4550...   296   5e-81

>Medtr1g016900.1 | UPF0587 C1orf123-like protein | HC |
           chr1:4550572-4546641 | 20130731
          Length = 166

 Score =  296 bits (759), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 137/166 (82%), Positives = 153/166 (92%)

Query: 1   MVNYMLMISAELENLTNLQPQGGCDDPNFSYLFKVKCGRCGELSQRETCVVLNDTVPLPV 60
           MVN+MLMISAELENLTNLQPQGG DDPNF Y FK+KCGRCGE+SQ+ETCV LNDTVPLP 
Sbjct: 1   MVNFMLMISAELENLTNLQPQGGVDDPNFPYFFKLKCGRCGEVSQKETCVSLNDTVPLPA 60

Query: 61  GKGSTHLIQKCKFCGREGTVTMVVGRGKPLTHETSESGKYSPLMLFDCRGYEPVDFVFTG 120
           G+G+THL+QKCKFC    TVTM+ G+GKPLT ET+ESGK+SPLMLFDCRGYEP+DFVF  
Sbjct: 61  GRGTTHLVQKCKFCASVSTVTMIPGKGKPLTQETTESGKFSPLMLFDCRGYEPIDFVFGT 120

Query: 121 GWKVESLEGTKFEDVDLSSGEFAEYDEKGECPVMISNVRATFDVVK 166
           GWKVESLEGTKFE+VDLSSG+F+EYDEKGECPVMISN+RATFDVVK
Sbjct: 121 GWKVESLEGTKFENVDLSSGDFSEYDEKGECPVMISNLRATFDVVK 166