Miyakogusa Predicted Gene

Lj5g3v0335550.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0335550.1 Non Characterized Hit- tr|I1MJK6|I1MJK6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,74.58,0.000000000000002, ,CUFF.52874.1
         (59 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g026785.1 | hypothetical protein | HC | chr3:8251194-82508...    93   7e-20

>Medtr3g026785.1 | hypothetical protein | HC |
          chr3:8251194-8250863 | 20130731
          Length = 58

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 45/59 (76%), Positives = 54/59 (91%), Gaps = 1/59 (1%)

Query: 1  MTLLSAIFCCFKSKEEDKSSDIAVVEAGSLSRKPEKDIKRSAAPIVASYFPVNSQPSRL 59
          MT+LSAIFCCFKS+EEDKS+ + VVEAGSLS+KP+ + +RS+APIV SYFPVNSQPSRL
Sbjct: 1  MTILSAIFCCFKSEEEDKSTHV-VVEAGSLSKKPKGEPQRSSAPIVVSYFPVNSQPSRL 58