Miyakogusa Predicted Gene
- Lj5g3v0322420.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0322420.1 Non Characterized Hit- tr|B9R6W3|B9R6W3_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,29.89,0.0001,seg,NULL,CUFF.52863.1
(187 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g017530.1 | hypothetical protein | HC | chr1:4938216-49362... 139 2e-33
Medtr1g017530.2 | hypothetical protein | HC | chr1:4938216-49362... 138 3e-33
Medtr3g103400.1 | DUF4378 domain protein | HC | chr3:47706502-47... 77 1e-14
>Medtr1g017530.1 | hypothetical protein | HC | chr1:4938216-4936230
| 20130731
Length = 333
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 110/185 (59%), Gaps = 22/185 (11%)
Query: 1 MASATAKPQKRLRDFLNEQQEPFILEVYLXXXXXXXXXXXXXXXXXXLNK--RRKPLLPF 58
MA+ A+PQKRL +FLNE+QEPF+LE+YL LNK +RK LLPF
Sbjct: 1 MATHLAEPQKRLGEFLNEKQEPFMLELYL--------LERGYSKSLSLNKKRKRKVLLPF 52
Query: 59 CKALTILHNKLGFNSESNIL--TREHDQRKRHATVSEPGLVDHVVQFSSASGSIEFNSCP 116
KAL + NKL F S+SN L TR+++QRK+HA + V+FSSAS S NSC
Sbjct: 53 SKALIFIINKLAFQSQSNTLPTTRDYEQRKKHAGCN--------VEFSSASNSTMSNSCS 104
Query: 117 CIG-EGTSISPHKDHNSFSSHIFQTSNACNKKRRQRQRCIEGNLESLGKIPLRNVLNGKF 175
+ EGTSIS H+DH+ FSSHI QT R QRQRC+EG +SL KIPL N
Sbjct: 105 NVDEEGTSISSHRDHHLFSSHIHQTCKEYT-MRWQRQRCMEGRSQSLAKIPLSRAPNENK 163
Query: 176 SLANM 180
+ M
Sbjct: 164 DVEGM 168
>Medtr1g017530.2 | hypothetical protein | HC | chr1:4938216-4936230
| 20130731
Length = 335
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 110/186 (59%), Gaps = 22/186 (11%)
Query: 1 MASATAKPQKRLRDFLNEQQEPFILEVYLXXXXXXXXXXXXXXXXXXLNK--RRKPLLPF 58
MA+ A+PQKRL +FLNE+QEPF+LE+YL LNK +RK LLPF
Sbjct: 1 MATHLAEPQKRLGEFLNEKQEPFMLELYL--------LERGYSKSLSLNKKRKRKVLLPF 52
Query: 59 CKALTILHNKLGFNSESNIL--TREHDQRKRHATVSEPGLVDHVVQFSSASGSIEFNSCP 116
KAL + NKL F S+SN L TR+++QRK+HA + V+FSSAS S NSC
Sbjct: 53 SKALIFIINKLAFQSQSNTLPTTRDYEQRKKHAGCN--------VEFSSASNSTMSNSCS 104
Query: 117 CIG-EGTSISPHKDHNSFSSHIFQTSNACN-KKRRQRQRCIEGNLESLGKIPLRNVLNGK 174
+ EGTSIS H+DH+ FSSHI QT R QRQRC+EG +SL KIPL N
Sbjct: 105 NVDEEGTSISSHRDHHLFSSHIHQTCKEYTMSNRWQRQRCMEGRSQSLAKIPLSRAPNEN 164
Query: 175 FSLANM 180
+ M
Sbjct: 165 KDVEGM 170
>Medtr3g103400.1 | DUF4378 domain protein | HC |
chr3:47706502-47708278 | 20130731
Length = 370
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 92/188 (48%), Gaps = 35/188 (18%)
Query: 1 MASATAKPQKRLRDFLNEQQEPFILEVYLXXXXXXXXXXXXXXXXXX--------LNKRR 52
MAS T KP+K+L +FL ++QEPFILE+YL NK+R
Sbjct: 1 MASPTLKPEKKLSEFLKDKQEPFILELYLLERSNCSKNWSSNSIKNLEKPASSCFFNKKR 60
Query: 53 KPLLPFCKA-LTILHN-----KLGFNSESNILTREHDQRKRHATVSEPGLVDHVVQ---- 102
KPL PF K LT +H+ K+ ++SNI T +H TV+ ++V Q
Sbjct: 61 KPLFPFLKVLLTAIHDTKKKKKVTTTNDSNI-TNQH--ANVAVTVTHEHEANNVDQAPIE 117
Query: 103 ---FSSASGSIEFNSCPCIGEG----TSISPHKDHNS-FSSHIFQTSNACNKKR------ 148
FS+AS S FNSC I + TS S +K +N FSS Q S+ CN +
Sbjct: 118 TDRFSTASSSTLFNSCSDIDDDEEDRTSFSSNKHYNPLFSSDTCQASDVCNMRMQSQQDG 177
Query: 149 RQRQRCIE 156
+ +QRCIE
Sbjct: 178 KHQQRCIE 185