Miyakogusa Predicted Gene
- Lj5g3v0310290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0310290.1 Non Characterized Hit- tr|J3MCS6|J3MCS6_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB06G1,39.36,0.0000000000001,no description,Zinc finger, LIM-type;
LIM_DOMAIN_2,Zinc finger, LIM-type; LIM_DOMAIN_1,Zinc finger,
,CUFF.53314.1
(195 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g017950.1 | GATA type zinc finger transcription factor fam... 380 e-106
Medtr1g017950.2 | GATA type zinc finger transcription factor fam... 380 e-106
Medtr4g106800.1 | GATA type zinc finger transcription factor fam... 257 4e-69
Medtr3g070050.2 | GATA type zinc finger transcription factor fam... 217 6e-57
Medtr3g070050.1 | GATA type zinc finger transcription factor fam... 217 6e-57
Medtr8g031490.1 | GATA type zinc finger transcription factor fam... 196 9e-51
Medtr7g076720.1 | GATA type zinc finger transcription factor fam... 194 5e-50
Medtr8g097300.1 | GATA type zinc finger transcription factor fam... 193 7e-50
Medtr3g070050.3 | GATA type zinc finger transcription factor fam... 150 7e-37
Medtr1g106100.1 | GATA type zinc finger transcription factor fam... 128 4e-30
Medtr3g070033.1 | GATA type zinc finger transcription factor fam... 76 2e-14
>Medtr1g017950.1 | GATA type zinc finger transcription factor family
protein | HC | chr1:5125381-5123274 | 20130731
Length = 195
Score = 380 bits (975), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/195 (92%), Positives = 189/195 (96%), Gaps = 2/195 (1%)
Query: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
MAFAGTTQKCMAC+KTVYLVDKLTADNR+FHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1 MAFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
Query: 61 HFDQLFKRTGSLDKSFEGTPKVAKPERNIDNEKPAAAKVSSMFGGTRDKCAGCQKTVYPT 120
HFDQLFKRTGSL+KSFEGTPK+ KPERNIDNEKPAAAK SSMFGGTRDKC+GCQKTVYPT
Sbjct: 61 HFDQLFKRTGSLEKSFEGTPKIVKPERNIDNEKPAAAKASSMFGGTRDKCSGCQKTVYPT 120
Query: 121 EKVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGDHE 180
EKVTVNGTPYHKSCFKCCHGGC ISPSNYIAHEGKLYCKHHHIQLIK+KGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKQKGNLSQLEGDHE 180
Query: 181 KNVVQGEINGDKVAA 195
KN G+ING++VAA
Sbjct: 181 KNA--GKINGEEVAA 193
>Medtr1g017950.2 | GATA type zinc finger transcription factor family
protein | HC | chr1:5125455-5123274 | 20130731
Length = 195
Score = 380 bits (975), Expect = e-106, Method: Compositional matrix adjust.
Identities = 180/195 (92%), Positives = 189/195 (96%), Gaps = 2/195 (1%)
Query: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
MAFAGTTQKCMAC+KTVYLVDKLTADNR+FHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1 MAFAGTTQKCMACNKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
Query: 61 HFDQLFKRTGSLDKSFEGTPKVAKPERNIDNEKPAAAKVSSMFGGTRDKCAGCQKTVYPT 120
HFDQLFKRTGSL+KSFEGTPK+ KPERNIDNEKPAAAK SSMFGGTRDKC+GCQKTVYPT
Sbjct: 61 HFDQLFKRTGSLEKSFEGTPKIVKPERNIDNEKPAAAKASSMFGGTRDKCSGCQKTVYPT 120
Query: 121 EKVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGDHE 180
EKVTVNGTPYHKSCFKCCHGGC ISPSNYIAHEGKLYCKHHHIQLIK+KGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKQKGNLSQLEGDHE 180
Query: 181 KNVVQGEINGDKVAA 195
KN G+ING++VAA
Sbjct: 181 KNA--GKINGEEVAA 193
>Medtr4g106800.1 | GATA type zinc finger transcription factor family
protein | HC | chr4:44086910-44085000 | 20130731
Length = 181
Score = 257 bits (657), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 142/175 (81%), Gaps = 1/175 (0%)
Query: 2 AFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61
+FAGT QKC C+K VY V++LTADN+VFHK+CFRCHHCKGTLKLSNY SFE VLYC+PH
Sbjct: 3 SFAGTAQKCNTCEKKVYWVEQLTADNKVFHKSCFRCHHCKGTLKLSNYCSFESVLYCKPH 62
Query: 62 FDQLFKRTGSLDKSFEGTPKVAKPERNIDNEKPAAAKVSSMFGGTRDKCAGCQKTVYPTE 121
FDQLFK TGSL KSFEG ++ + ER+ D + A KVS F GT++KC GC+KTVYP E
Sbjct: 63 FDQLFKMTGSLYKSFEGITRIYRVERSTD-QVQAYNKVSRFFAGTQEKCVGCKKTVYPIE 121
Query: 122 KVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLE 176
KV V+G YHK+CF+C HGGC+ISPSNY+AHE +LYC+HHH Q+ K+KGN SQ +
Sbjct: 122 KVAVDGESYHKNCFRCTHGGCIISPSNYVAHEHRLYCRHHHTQIFKQKGNFSQFD 176
>Medtr3g070050.2 | GATA type zinc finger transcription factor family
protein | HC | chr3:31366370-31362368 | 20130731
Length = 191
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 128/177 (72%), Gaps = 4/177 (2%)
Query: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
M+F GT QKC AC+KTVY VD+L+AD +HKACFRC HCKGTLKLS+Y+S EGVLYC+P
Sbjct: 1 MSFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKP 60
Query: 61 HFDQLFKRTG--SLDKSFEGTPKVAKPERNIDNEKPAAAKVSSMFGGTRDKCAGCQKTVY 118
HF+QLFK G S +K+F+ KVA + P +K + MF GT++KCA C KT Y
Sbjct: 61 HFEQLFKEHGNFSKNKNFQSPAKVADGTTPVLTRTP--SKAAGMFSGTQEKCATCGKTAY 118
Query: 119 PTEKVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQL 175
P EKVTV YHKSCFKC HGGC I+PSNY A EG LYCKHH QL KEKG+ + L
Sbjct: 119 PLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHL 175
>Medtr3g070050.1 | GATA type zinc finger transcription factor family
protein | HC | chr3:31366370-31362368 | 20130731
Length = 191
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 128/177 (72%), Gaps = 4/177 (2%)
Query: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
M+F GT QKC AC+KTVY VD+L+AD +HKACFRC HCKGTLKLS+Y+S EGVLYC+P
Sbjct: 1 MSFIGTQQKCKACEKTVYPVDQLSADGTSYHKACFRCSHCKGTLKLSSYSSMEGVLYCKP 60
Query: 61 HFDQLFKRTG--SLDKSFEGTPKVAKPERNIDNEKPAAAKVSSMFGGTRDKCAGCQKTVY 118
HF+QLFK G S +K+F+ KVA + P +K + MF GT++KCA C KT Y
Sbjct: 61 HFEQLFKEHGNFSKNKNFQSPAKVADGTTPVLTRTP--SKAAGMFSGTQEKCATCGKTAY 118
Query: 119 PTEKVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQL 175
P EKVTV YHKSCFKC HGGC I+PSNY A EG LYCKHH QL KEKG+ + L
Sbjct: 119 PLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHL 175
>Medtr8g031490.1 | GATA type zinc finger transcription factor family
protein | HC | chr8:11821023-11822649 | 20130731
Length = 205
Score = 196 bits (499), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 126/183 (68%), Gaps = 7/183 (3%)
Query: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
M+F GT KC ACDKTVY+VD LT +N +HK+CF+C HCKG L +S Y+S +G+LYC+
Sbjct: 1 MSFTGTLDKCKACDKTVYVVDLLTLENIPYHKSCFKCSHCKGNLTMSTYSSMDGILYCKT 60
Query: 61 HFDQLFKRTGSLDKSFEGTPKVAKPERNIDNEKPAAAKVSSMFGGTRDKCAGCQKTVYPT 120
HF+QLFK +G+ K+F + A N N P +++SSMF GT DKCA C KTVYP
Sbjct: 61 HFEQLFKESGNFSKNFAKSSDKA----NELNRTP--SRLSSMFSGTLDKCATCSKTVYPL 114
Query: 121 EKVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQ-LEGDH 179
EKVT+ G YHK+CF+C H GC ++ SNY A +G LYC+ H QL EKGN S L+ H
Sbjct: 115 EKVTLEGEIYHKTCFRCAHAGCPLTHSNYAALDGVLYCRVHFAQLFMEKGNYSHVLKSAH 174
Query: 180 EKN 182
++N
Sbjct: 175 KRN 177
>Medtr7g076720.1 | GATA type zinc finger transcription factor family
protein | HC | chr7:28939319-28937779 | 20130731
Length = 212
Score = 194 bits (493), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 124/175 (70%), Gaps = 4/175 (2%)
Query: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
M+F GT KC ACDKTVY+VD LT + +HK+C +C HCKG L +S Y+S +GVLYC+P
Sbjct: 1 MSFTGTLDKCKACDKTVYVVDLLTLEGIPYHKSCLKCTHCKGNLTMSTYSSMDGVLYCKP 60
Query: 61 HFDQLFKRTGSLDKSFEGTPKVAKPERNIDNEKPAAAKVSSMFGGTRDKCAGCQKTVYPT 120
HF+QLFK +G+ K+F+ K ++ + N P +++SSMF GT DKCA C KTVYP
Sbjct: 61 HFEQLFKESGNFSKNFQA--KSSEKINELMNRTP--SRLSSMFSGTLDKCAVCTKTVYPL 116
Query: 121 EKVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQL 175
EK+++ G YHK+CF+C HGGC ++ S+Y A +G LYCKHH QL EKGN + +
Sbjct: 117 EKMSLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFQQLFMEKGNYNHV 171
>Medtr8g097300.1 | GATA type zinc finger transcription factor family
protein | HC | chr8:40763311-40761680 | 20130731
Length = 211
Score = 193 bits (491), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 99/177 (55%), Positives = 123/177 (69%), Gaps = 12/177 (6%)
Query: 1 MAFAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
M+F GT QKC CDKTV+LVD L+AD VFHK CFRC+ C G L +SNY S EGVLYC+
Sbjct: 1 MSFTGTQQKCKVCDKTVHLVDTLSADGNVFHKNCFRCNQCNGLLAMSNYQSIEGVLYCKT 60
Query: 61 HFDQLFKRTGSLDKSFEGTPKVA-KPERNIDNEKP-AAAKVSSMFGGTRDKCAGCQKTVY 118
H +QLFK + + K P+ A KP +E P A +K+S+ F GT+DKC+ C+KTVY
Sbjct: 61 HAEQLFKDSFAAKK-----PQTAGKP-----SELPRAPSKLSAFFSGTQDKCSSCKKTVY 110
Query: 119 PTEKVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQL 175
P EK+TV G YHKSCF+C HGGC +SPS+Y A +G +YCK H QL K KG+ S L
Sbjct: 111 PLEKLTVEGEFYHKSCFRCTHGGCFLSPSSYAALDGFIYCKPHFSQLFKAKGSYSYL 167
>Medtr3g070050.3 | GATA type zinc finger transcription factor family
protein | HC | chr3:31365483-31362457 | 20130731
Length = 149
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 92/134 (68%), Gaps = 4/134 (2%)
Query: 44 LKLSNYNSFEGVLYCRPHFDQLFKRTGSL--DKSFEGTPKVAKPERNIDNEKPAAAKVSS 101
+LS+Y+S EGVLYC+PHF+QLFK G+ +K+F+ KVA + P+ K +
Sbjct: 2 FQLSSYSSMEGVLYCKPHFEQLFKEHGNFSKNKNFQSPAKVADGTTPVLTRTPS--KAAG 59
Query: 102 MFGGTRDKCAGCQKTVYPTEKVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHH 161
MF GT++KCA C KT YP EKVTV YHKSCFKC HGGC I+PSNY A EG LYCKHH
Sbjct: 60 MFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHH 119
Query: 162 HIQLIKEKGNLSQL 175
QL KEKG+ + L
Sbjct: 120 FSQLFKEKGSYNHL 133
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 3 FAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHF 62
F+GT +KC C KT Y ++K+T +++ +HK+CF+C H + SNY + EG+LYC+ HF
Sbjct: 61 FSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHF 120
Query: 63 DQLFKRTGSLD 73
QLFK GS +
Sbjct: 121 SQLFKEKGSYN 131
>Medtr1g106100.1 | GATA type zinc finger transcription factor family
protein | LC | chr1:48032132-48031113 | 20130731
Length = 154
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 6/111 (5%)
Query: 59 RPHFDQLFKRTGSLDKSFEGTPKVAKPERN-IDNEKPAAAKVSSMFGGTRDKCAGCQKTV 117
RPH+DQL KRTGSLDK K K N I NE+ A ++ F + +C C+KTV
Sbjct: 20 RPHYDQLCKRTGSLDK-----LKALKSLTNLILNEQNAKILANAFFLRQQKQCMCCKKTV 74
Query: 118 YPTEKVTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKE 168
YPTE+VTVNGT YH+ CFKC +GGC IS SN+++HE KLYCKHHHIQL KE
Sbjct: 75 YPTERVTVNGTLYHRGCFKCTYGGCTISSSNFVSHETKLYCKHHHIQLFKE 125
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 3 FAGTTQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHF 62
F ++CM C KTVY +++T + ++H+ CF+C + T+ SN+ S E LYC+ H
Sbjct: 60 FLRQQKQCMCCKKTVYPTERVTVNGTLYHRGCFKCTYGGCTISSSNFVSHETKLYCKHHH 119
Query: 63 DQLFK 67
QLFK
Sbjct: 120 IQLFK 124
>Medtr3g070033.1 | GATA type zinc finger transcription factor family
protein | HC | chr3:31353097-31352086 | 20130731
Length = 74
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 39/53 (73%)
Query: 123 VTVNGTPYHKSCFKCCHGGCVISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQL 175
VTV YHKSCFKC HGGC I+PSNY A EG LYCKHH QL KEKG+ + L
Sbjct: 6 VTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHL 58
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 23 LTADNRVFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLD 73
+T +++ +HK+CF+C H + SNY + EG+LYC+ HF QLFK GS +
Sbjct: 6 VTVESQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYN 56