Miyakogusa Predicted Gene

Lj5g3v0310210.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0310210.1 tr|C7J4Y9|C7J4Y9_ORYSJ Os07g0586000 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os07g05860,68.89,0.00000000008,seg,NULL; B-LYMPHOCYTE
ANTIGEN-RELATED,NULL,CUFF.52849.1
         (330 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g018000.1 | ZCW7 | HC | chr1:5152864-5148392 | 20130731         403   e-112
Medtr1g018000.2 | ZCW7 | HC | chr1:5152864-5148392 | 20130731         299   3e-81

>Medtr1g018000.1 | ZCW7 | HC | chr1:5152864-5148392 | 20130731
          Length = 332

 Score =  403 bits (1035), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/331 (65%), Positives = 252/331 (76%), Gaps = 11/331 (3%)

Query: 6   EQQPSMKQVTPTSTVDIDNGLTLVPRIKLNLTVHPSTPTTLTNP-IDHWKMKRALIDFLN 64
           E+Q  +  +  T+ + ID  LTL+PRIKLNLT+HPS P++LT+  ID +++K +L+ FL 
Sbjct: 7   EEQEDLTLIPLTTPLQIDKDLTLLPRIKLNLTIHPSNPSSLTSSSIDQFQLKNSLLTFLQ 66

Query: 65  SSHSLS--IPEENLQXXXXXXX-XXXXXXXAVATGTLHIWDLTFLPQTENDTSVSQWRSR 121
           +S +L   +PEE+L                 +  GTLHIW+LTFL Q++ND  V + R+R
Sbjct: 67  TSKTLPFPLPEEDLIFKRFHKDPKKRKRDEPLVYGTLHIWNLTFL-QSKND--VVETRNR 123

Query: 122 FAEKVNGTELNLQGVRFTLEVSVPVGDDFDAVKKDWEEFYAFGNRG--LRREPDTIVIKG 179
             EK+NG E+NL GV+F LEVSV   DDF+ +KK WEEFYAFGN     +REPDTIVI+G
Sbjct: 124 LVEKMNGIEMNLLGVKFRLEVSVSDCDDFEFMKKGWEEFYAFGNGNGNRKREPDTIVIRG 183

Query: 180 VPSRWFAEPRVSSKPSMLVTHTIFSKFGKIRNLNVAEDDDFGKDANEDSGDLVSGLYCKI 239
           VPSRWFAE RVSSKPSMLVTHTIF KFGKIRNLNVAEDD   KDANEDSGDLVSGLYCKI
Sbjct: 184 VPSRWFAETRVSSKPSMLVTHTIFEKFGKIRNLNVAEDDYSAKDANEDSGDLVSGLYCKI 243

Query: 240 VVQFEKYIDFHDALRVLCSRSLQKQGSRLKADYEVSWDKDGFFRYSRTQTQEKNNGVSKI 299
           VVQFEKY DFHDALRVLC RSLQKQGSRLKADYEV+WDKDGFFR SR Q QEKNN V  I
Sbjct: 244 VVQFEKYKDFHDALRVLCGRSLQKQGSRLKADYEVTWDKDGFFRNSRNQPQEKNNAV--I 301

Query: 300 ATQQNRSEAPRRQSYNSRQSPDRVRPRRFQE 330
           A    RSEAPRRQ YNSR SPDRVRPRRF+E
Sbjct: 302 AADHYRSEAPRRQVYNSRHSPDRVRPRRFKE 332


>Medtr1g018000.2 | ZCW7 | HC | chr1:5152864-5148392 | 20130731
          Length = 278

 Score =  299 bits (765), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 166/269 (61%), Positives = 199/269 (73%), Gaps = 9/269 (3%)

Query: 6   EQQPSMKQVTPTSTVDIDNGLTLVPRIKLNLTVHPSTPTTLTNP-IDHWKMKRALIDFLN 64
           E+Q  +  +  T+ + ID  LTL+PRIKLNLT+HPS P++LT+  ID +++K +L+ FL 
Sbjct: 7   EEQEDLTLIPLTTPLQIDKDLTLLPRIKLNLTIHPSNPSSLTSSSIDQFQLKNSLLTFLQ 66

Query: 65  SSHSLS--IPEENLQXXXXXXX-XXXXXXXAVATGTLHIWDLTFLPQTENDTSVSQWRSR 121
           +S +L   +PEE+L                 +  GTLHIW+LTFL Q++ND  V + R+R
Sbjct: 67  TSKTLPFPLPEEDLIFKRFHKDPKKRKRDEPLVYGTLHIWNLTFL-QSKND--VVETRNR 123

Query: 122 FAEKVNGTELNLQGVRFTLEVSVPVGDDFDAVKKDWEEFYAFGNRG--LRREPDTIVIKG 179
             EK+NG E+NL GV+F LEVSV   DDF+ +KK WEEFYAFGN     +REPDTIVI+G
Sbjct: 124 LVEKMNGIEMNLLGVKFRLEVSVSDCDDFEFMKKGWEEFYAFGNGNGNRKREPDTIVIRG 183

Query: 180 VPSRWFAEPRVSSKPSMLVTHTIFSKFGKIRNLNVAEDDDFGKDANEDSGDLVSGLYCKI 239
           VPSRWFAE RVSSKPSMLVTHTIF KFGKIRNLNVAEDD   KDANEDSGDLVSGLYCKI
Sbjct: 184 VPSRWFAETRVSSKPSMLVTHTIFEKFGKIRNLNVAEDDYSAKDANEDSGDLVSGLYCKI 243

Query: 240 VVQFEKYIDFHDALRVLCSRSLQKQGSRL 268
           VVQFEKY DFHDALRVLC RSLQK  + L
Sbjct: 244 VVQFEKYKDFHDALRVLCGRSLQKAVADL 272