Miyakogusa Predicted Gene

Lj5g3v0308840.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0308840.2 CUFF.52825.2
         (204 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g018205.1 | porin/voltage-dependent anion-selective channe...   273   7e-74
Medtr5g015580.1 | porin/voltage-dependent anion-selective channe...   182   1e-46
Medtr4g128300.1 | porin/voltage-dependent anion-selective channe...   141   3e-34
Medtr6g011390.1 | porin/voltage-dependent anion-selective channe...   120   7e-28
Medtr7g009330.1 | porin/voltage-dependent anion-selective channe...   116   2e-26
Medtr8g469150.1 | porin/voltage-dependent anion-selective channe...   114   5e-26
Medtr8g469150.2 | porin/voltage-dependent anion-selective channe...   114   6e-26
Medtr4g107840.1 | porin/voltage-dependent anion-selective channe...    56   3e-08

>Medtr1g018205.1 | porin/voltage-dependent anion-selective channel
           protein | HC | chr1:5242717-5245592 | 20130731
          Length = 277

 Score =  273 bits (698), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 136/197 (69%), Positives = 150/197 (76%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP  FSDI K+ RDIL KDYNSD                   +KSRGLSSG VAA FKHN
Sbjct: 5   GPGLFSDIGKKSRDILTKDYNSDQKLTISSSTNSGLDLNSTLLKSRGLSSGDVAAQFKHN 64

Query: 68  NKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGL 127
           NKTLHFK+DTDSTVLTTF+  + VPS K +AS+RLP Y SGKI VQYLH H   T AV L
Sbjct: 65  NKTLHFKVDTDSTVLTTFSATDFVPSAKVLASVRLPDYKSGKIEVQYLHDHAGFTAAVDL 124

Query: 128 NRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMK 187
           NR P +DFSATIGTP IAFGAETSYST  G FTKYNAGLC ++PSS+ASV+LADKGDSMK
Sbjct: 125 NRKPAIDFSATIGTPGIAFGAETSYSTLVGNFTKYNAGLCLKLPSSSASVLLADKGDSMK 184

Query: 188 VSYLRELERLNGGAIVG 204
           VSYLR+LE+LNGGAIVG
Sbjct: 185 VSYLRDLEKLNGGAIVG 201


>Medtr5g015580.1 | porin/voltage-dependent anion-selective channel
           protein | HC | chr5:5411450-5408079 | 20130731
          Length = 276

 Score =  182 bits (463), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 92/196 (46%), Positives = 122/196 (62%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP  +SDI K+ +D+L KDYNSD                   +K  GLS+G VA  +K+ 
Sbjct: 4   GPGLYSDIGKKAKDLLTKDYNSDQKLTVSSYSTTGVALTSTALKKGGLSTGDVAGQYKYK 63

Query: 68  NKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGL 127
           N  +  K++T S + TT T  ++ PSTKT+ASI+LP Y SGK+ VQY H H  LT    L
Sbjct: 64  NTLIDVKIETASIINTTLTFTDLFPSTKTIASIKLPDYSSGKLEVQYFHDHATLTSVATL 123

Query: 128 NRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMK 187
            +SP  D SAT+G+P++AFGAE  Y T +G FTKYN G+ F    S+ASVI+ DKGDS+K
Sbjct: 124 KQSPIFDVSATVGSPTLAFGAEAGYDTKSGSFTKYNTGISFTKLDSSASVIIGDKGDSIK 183

Query: 188 VSYLRELERLNGGAIV 203
           VSYL  L+++   A V
Sbjct: 184 VSYLHHLDQIKKSAAV 199


>Medtr4g128300.1 | porin/voltage-dependent anion-selective channel
           protein | HC | chr4:53422788-53417280 | 20130731
          Length = 279

 Score =  141 bits (356), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 76/194 (39%), Positives = 111/194 (57%), Gaps = 2/194 (1%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP PFS+I KR RD+L KDYN DH                  +K      G +   +K  
Sbjct: 4   GPAPFSEIGKRARDLLYKDYNFDHKFSLSIPSSTGLGLTATGLKRDKFFVGDLNTLYKSG 63

Query: 68  NKTLHFKLDTDSTVLTTFTIANVV--PSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAV 125
           N T+  K++TDS V T  T+ +V    S K   S  +P + SGK+ VQYLH H A+  ++
Sbjct: 64  NVTVDVKVNTDSNVSTKVTLNDVSLSHSKKVALSFNIPDHKSGKLDVQYLHPHAAIDSSI 123

Query: 126 GLNRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDS 185
           GLN +P ++ SA IG+  I+ GAE  + T++  F+ YNAG+ F  P  +A+++LADKG S
Sbjct: 124 GLNPAPKLELSAAIGSKDISMGAEVGFDTTSASFSTYNAGIAFNKPDFSATLMLADKGQS 183

Query: 186 MKVSYLRELERLNG 199
           +K SY+  ++R +G
Sbjct: 184 LKASYIHYVDRPDG 197


>Medtr6g011390.1 | porin/voltage-dependent anion-selective channel
           protein | HC | chr6:3211704-3207208 | 20130731
          Length = 278

 Score =  120 bits (302), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 94/185 (50%), Gaps = 2/185 (1%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP  +SDI K+ RD+L KDYN+D                    K   L    +    KH 
Sbjct: 4   GPGLYSDIGKKARDLLYKDYNTDQKFTLTTYSPTGIALTASSTKKGELFLADINTQLKHK 63

Query: 68  NKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYD--SGKIAVQYLHHHVALTGAV 125
           N T   K+DTDS + TT T+    P  KT+ S R+P  +  SGK  VQYLH +  ++ ++
Sbjct: 64  NVTTDIKVDTDSNLFTTITVTEPAPGLKTILSFRIPEPELKSGKAEVQYLHDYAGISASI 123

Query: 126 GLNRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDS 185
           GL  +P  +FS  IG   +A G + SY T  G FT+ NAGL F      AS+ L +K ++
Sbjct: 124 GLTANPVANFSGVIGNNVVALGGDLSYDTKTGVFTRLNAGLNFTKDDLIASLTLNEKANA 183

Query: 186 MKVSY 190
           +  SY
Sbjct: 184 LNASY 188


>Medtr7g009330.1 | porin/voltage-dependent anion-selective channel
           protein | HC | chr7:2022950-2017988 | 20130731
          Length = 277

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 93/183 (50%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP  ++DI K+ RD+L KDYNSD                    K   L  G V    K+ 
Sbjct: 5   GPGLYTDIGKKARDLLFKDYNSDQKFTVSTYSPTGVAITSSGTKKGELFVGDVNTQLKNK 64

Query: 68  NKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGL 127
           N T   K+DT+S + TT T+    P  K + S ++P   SGK+ +QYLH +  ++G +GL
Sbjct: 65  NYTADIKVDTESNLFTTITVTEPAPGVKAIISCKVPDPASGKVELQYLHDYAGISGNIGL 124

Query: 128 NRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMK 187
             +P V+ S   GT ++AFG + SY T   + TK N G+ F       ++ L +KGD + 
Sbjct: 125 KANPVVNLSGVFGTNALAFGGDISYDTKLRELTKSNVGVSFIKDDLLGALTLNEKGDVLN 184

Query: 188 VSY 190
            SY
Sbjct: 185 ASY 187


>Medtr8g469150.1 | porin/voltage-dependent anion-selective channel
           protein | HC | chr8:25095914-25099359 | 20130731
          Length = 276

 Score =  114 bits (286), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 99/195 (50%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP  +SDI KR RD+L KDY +DH                  V+        V+   K+ 
Sbjct: 4   GPGLYSDIGKRARDLLFKDYQNDHKFTITTQTLAGVEITSAGVRKGEAFLADVSTKVKNK 63

Query: 68  NKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGL 127
           N T   K+DT+S + TT T+   VP  KT+ S   P   SGK+ +QYLH +  ++ ++GL
Sbjct: 64  NVTTDIKVDTNSNLRTTITVDETVPGLKTIFSFIYPEQKSGKVELQYLHDYAGISTSIGL 123

Query: 128 NRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMK 187
             +P V+ SA +G   ++ G++ S+ TS+G   K N GL        AS+ + D+GDS+ 
Sbjct: 124 TATPTVNISAVLGNNLVSVGSDVSFETSSGSLNKCNFGLNVTHADLIASLTVNDRGDSLN 183

Query: 188 VSYLRELERLNGGAI 202
            SY   +  L   A+
Sbjct: 184 ASYYHVVSPLTNTAV 198


>Medtr8g469150.2 | porin/voltage-dependent anion-selective channel
           protein | HC | chr8:25095983-25099299 | 20130731
          Length = 278

 Score =  114 bits (285), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 66/195 (33%), Positives = 99/195 (50%)

Query: 8   GPVPFSDIVKRERDILNKDYNSDHXXXXXXXXXXXXXXXXXXVKSRGLSSGAVAAAFKHN 67
           GP  +SDI KR RD+L KDY +DH                  V+        V+   K+ 
Sbjct: 4   GPGLYSDIGKRARDLLFKDYQNDHKFTITTQTLAGVEITSAGVRKGEAFLADVSTKVKNK 63

Query: 68  NKTLHFKLDTDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAVGL 127
           N T   K+DT+S + TT T+   VP  KT+ S   P   SGK+ +QYLH +  ++ ++GL
Sbjct: 64  NVTTDIKVDTNSNLRTTITVDETVPGLKTIFSFIYPEQKSGKVELQYLHDYAGISTSIGL 123

Query: 128 NRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVILADKGDSMK 187
             +P V+ SA +G   ++ G++ S+ TS+G   K N GL        AS+ + D+GDS+ 
Sbjct: 124 TATPTVNISAVLGNNLVSVGSDVSFETSSGSLNKCNFGLNVTHADLIASLTVNDRGDSLN 183

Query: 188 VSYLRELERLNGGAI 202
            SY   +  L   A+
Sbjct: 184 ASYYHVVSPLTNTAV 198


>Medtr4g107840.1 | porin/voltage-dependent anion-selective channel
           protein | HC | chr4:44696072-44694242 | 20130731
          Length = 244

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 9/143 (6%)

Query: 67  NNKTLHFKLD-TDSTVLTTFTIANVVPSTKTVASIRLPYYDSGKIAVQYLHHHVALTGAV 125
           N   +HF     D     +  +  ++P  +TV    +P  DSGK+ +QYL+    +TG +
Sbjct: 25  NQSPIHFHYQFMDWNAGFSCKVQEILPGFRTVFKCTVP--DSGKVELQYLNRFTGITGCI 82

Query: 126 GL------NRSPDVDFSATIGTPSIAFGAETSYSTSAGKFTKYNAGLCFQMPSSNASVIL 179
           GL         P V  S  +GT  ++ GA  +        TK  AG         AS+ L
Sbjct: 83  GLLGNEEGAYDPVVKLSGLLGTSILSLGANVALHIPTRSITKLTAGFGLNTAFLEASLTL 142

Query: 180 ADKGDSMKVSYLRELERLNGGAI 202
            D  D++K +   E+  L   AI
Sbjct: 143 HDSFDTLKATIYHEVNPLTQTAI 165