Miyakogusa Predicted Gene

Lj5g3v0308810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0308810.1 Non Characterized Hit- tr|B8LS03|B8LS03_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,25.19,1e-18,F-box,F-box domain, cyclin-like; no description,NULL; no
description,Kelch-type beta propeller; Kelc,CUFF.52822.1
         (377 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g018140.1 | F-box/kelch-repeat plant protein | HC | chr1:5...   472   e-133
Medtr7g017400.1 | F-box/kelch-repeat plant protein | HC | chr7:5...    76   6e-14
Medtr3g085160.2 | F-box only-like protein | HC | chr3:38481914-3...    71   2e-12
Medtr3g085160.3 | F-box only-like protein | HC | chr3:38481277-3...    71   2e-12
Medtr3g085160.1 | F-box only-like protein | HC | chr3:38481986-3...    71   2e-12
Medtr1g033280.1 | F-box only-like protein | LC | chr1:11953743-1...    54   2e-07
Medtr4g094748.1 | unusual floral organs-like protein | HC | chr4...    53   5e-07

>Medtr1g018140.1 | F-box/kelch-repeat plant protein | HC |
           chr1:5250181-5249033 | 20130731
          Length = 382

 Score =  472 bits (1215), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 247/372 (66%), Positives = 275/372 (73%), Gaps = 14/372 (3%)

Query: 20  LMMMKMDPKIWSKLPPEILEYILSFLPLKTLLNLRSTCKGFWSLVXXXXXXXXXXXXXXX 79
           L  + MDP IWSKLPPEILEYILSFLPLKT ++LRSTCKGFW L+               
Sbjct: 11  LKSLPMDPTIWSKLPPEILEYILSFLPLKTFMSLRSTCKGFWPLIFSPSFISKHSPSSSS 70

Query: 80  XXXXXXXXXX----XXHRHYPLYDCTLGTWRNIXXXXXXXXXX--XXXXXXXXGGLFCLS 133
                           HRH+PLYDC LGTWRNI                    GGLFCLS
Sbjct: 71  SSSPFSSFLLLSHPQFHRHFPLYDCNLGTWRNISLSFSDSLHSSPSFTTLVSSGGLFCLS 130

Query: 134 DSMSCSLLIFNLLAKTSRKIQYPSYSLHLEHLTFVTTPSGYIIFSLFSASATNRAFVYDS 193
           DS+SCSLL+ NLLAK+ RKIQYP+++LH+EHLTFVTTP GY+IF L S S +N  F+YDS
Sbjct: 131 DSLSCSLLVCNLLAKSKRKIQYPNFNLHIEHLTFVTTPKGYMIFVLSSESNSNSVFLYDS 190

Query: 194 EVR--SWRRFNGFGPILGDKLHQQGVFFNRGLYFATPEPFSIVRFDLESGVWERPVGELP 251
             R  SWR+FNGFGP L D  HQQGV+F   LYFATPEPFS+V FDLESG WE+P+G LP
Sbjct: 191 SSRVLSWRKFNGFGPTLSDNPHQQGVYFKGCLYFATPEPFSVVYFDLESGKWEKPIGNLP 250

Query: 252 GQLTFARLVSDGEG------KLYLIGGVGNNGISRSMKLWELGEAGDWVEVQSLPELMCR 305
            QLTF RLVS  +       KL+LIGGVG+NGISRS+KLWE+ E G+WVE+QSLP+LMCR
Sbjct: 251 EQLTFVRLVSVNDDAVEEGKKLFLIGGVGSNGISRSIKLWEMSEEGNWVEIQSLPDLMCR 310

Query: 306 KFVSVCYHKYEHVYCFWHEGMICICCYTWPEILYYLVSRRTWHWLPRCPSLPLKCSCGFK 365
           KFVSVCYH YEHVYCFWHEGMICICCYTWPEILYYLVSRRTWHWLPRCPSLP KCSCGFK
Sbjct: 311 KFVSVCYHNYEHVYCFWHEGMICICCYTWPEILYYLVSRRTWHWLPRCPSLPFKCSCGFK 370

Query: 366 WFSFVPKLYASV 377
           WFSFVPKLYA V
Sbjct: 371 WFSFVPKLYAEV 382


>Medtr7g017400.1 | F-box/kelch-repeat plant protein | HC |
           chr7:5537668-5535525 | 20130731
          Length = 438

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/336 (21%), Positives = 133/336 (39%), Gaps = 17/336 (5%)

Query: 23  MKMDPKIWSKLPPEILEYILSFLPLKTLLNLRSTCKGFWSLVXXXXXXXXXXXXXXXXXX 82
           ++M+  IW+ LP ++L  IL+ +P   +  LRS CK + SL+                  
Sbjct: 88  VQMEDNIWAMLPEDLLHEILARVPPFLIFRLRSVCKRWNSLLQDSSFLKFHSSVPSHGPC 147

Query: 83  XXXXXXXXXHRHYPLYDCTLGTWRNIXXXXXXXXXXXXXXXXXXGGLFCLSDSMSCS--L 140
                         +Y   L TW  +                  GGL C S        +
Sbjct: 148 VLSFCKSSLIPQCSVYSLPLKTWYRMCFTFLPHWAIWLVGSS--GGLVCFSGCEGSVFYI 205

Query: 141 LIFNLLAKTSRKIQYPSYSLHLEHLTFVTTPSGYIIFSLFSAS--ATNRAF---VYDSEV 195
           L+ N L +T RK+  PS   + +    +        F + + +   ++++    +YDS+ 
Sbjct: 206 LVCNPLTQTWRKL--PSMHFNQQRQLIMVVDRSDQSFKVIATNDICSDKSLPTEIYDSKE 263

Query: 196 RSWRRFNGFGPILGDKLHQQGVFFNRGLYFATPEPFSIVRFDLESGVWERPVGELPGQLT 255
             W           +    +  + +  LY  T  P  ++ + L+   WE    + P  L 
Sbjct: 264 DKWSVHQTMPA--SNLCSSKMAYCDSRLYLETLSPLGLMMYRLDINRWEHIPAKFPRSLL 321

Query: 256 FARLVSDGEGKLYLIGGVGNNGISRSMKLWELGEAGD-WVEVQSLPELMCRKFVSVCYHK 314
              LV+  + +L+L+G +G     +S+++WEL  A   W E+  +P    R  + +   +
Sbjct: 322 DGYLVAGTQKRLFLVGRIGLYSTLQSIRIWELDHAKILWGEISRMPPRYFRSLLRLSAER 381

Query: 315 YEHVYCFWHEGMICICCYTWPEILYYLVSRRTWHWL 350
           +E   CF  + +IC   Y   + L + V ++ W W+
Sbjct: 382 FE---CFGLDNLICFTSYNQGKGLLFDVDKKIWSWI 414


>Medtr3g085160.2 | F-box only-like protein | HC |
           chr3:38481914-38477479 | 20130731
          Length = 396

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 27/343 (7%)

Query: 25  MDPKIWSKLPPEILEYILSFLPLKTLLNLRSTCKGFWSLVXXXXXXXXXXXXXXXXXXXX 84
           M+ +IW   P ++ E +++ LP+      RS C+ + SL+                    
Sbjct: 42  MEQEIWKDFPEDLFEAVIARLPIAAFFRFRSVCRQWNSLLASQSFSKQCAEVPQENPWFY 101

Query: 85  XXXXXXXHRHYPLYDCTLGTWRNIXXXXXXXXXXXXXXXXXXGGLFCLSDSMSCSLLIFN 144
                  +    +YD +L  W +                   GGL C  D    +  + N
Sbjct: 102 TITHENVNSG-AMYDPSLKKWHH-PSISPLPTKLIVLPVASAGGLVCFLDIGHRNFYVCN 159

Query: 145 LLAKTSRKIQYPSYSLHLEHLTFV-------TTPSGYIIFSLFSASATNRAFVYDSEVRS 197
            L ++ +++  P+ S+ +     V       +  SGY I  +          VYDS   S
Sbjct: 160 PLTQSFKEL--PARSVKVWSRVAVGMTVNRNSIGSGYKILWV---GCDGEYEVYDSVKNS 214

Query: 198 WRR-FNGFGPI---LGDKLHQQGVFFNRGLYFATPEPFSIVRFDLESGVWERPVGELPGQ 253
           W R  N  G +   L      Q V  +  LYF   +P  +V +D+ +GVW++ +   P  
Sbjct: 215 WSRPGNMPGSMNLPLSLNFRSQTVSIDSTLYFMRSDPEGVVSYDMATGVWKQYIIPAPLH 274

Query: 254 LTFARLVSDGEGKLYLIGGVGNNGISRSMKLWELGEAG-DWVEVQSLPELMCRKFVSVCY 312
           LT   L ++ +G++ L+G +  N  +  + +WEL      W EV  +P + C  F    Y
Sbjct: 275 LTDHTL-AEYDGQIMLVGLLTKNAAT-CVCIWELQRMTLLWKEVDRMPNIWCLDF----Y 328

Query: 313 HKYEHVYCFWHEG--MICICCYTWPEILYYLVSRRTWHWLPRC 353
            K+  + C  ++G  M+ +       ++ Y ++++ W  +P C
Sbjct: 329 GKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIAKKEWLKVPGC 371


>Medtr3g085160.3 | F-box only-like protein | HC |
           chr3:38481277-38477525 | 20130731
          Length = 396

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 27/343 (7%)

Query: 25  MDPKIWSKLPPEILEYILSFLPLKTLLNLRSTCKGFWSLVXXXXXXXXXXXXXXXXXXXX 84
           M+ +IW   P ++ E +++ LP+      RS C+ + SL+                    
Sbjct: 42  MEQEIWKDFPEDLFEAVIARLPIAAFFRFRSVCRQWNSLLASQSFSKQCAEVPQENPWFY 101

Query: 85  XXXXXXXHRHYPLYDCTLGTWRNIXXXXXXXXXXXXXXXXXXGGLFCLSDSMSCSLLIFN 144
                  +    +YD +L  W +                   GGL C  D    +  + N
Sbjct: 102 TITHENVNSG-AMYDPSLKKWHH-PSISPLPTKLIVLPVASAGGLVCFLDIGHRNFYVCN 159

Query: 145 LLAKTSRKIQYPSYSLHLEHLTFV-------TTPSGYIIFSLFSASATNRAFVYDSEVRS 197
            L ++ +++  P+ S+ +     V       +  SGY I  +          VYDS   S
Sbjct: 160 PLTQSFKEL--PARSVKVWSRVAVGMTVNRNSIGSGYKILWV---GCDGEYEVYDSVKNS 214

Query: 198 WRR-FNGFGPI---LGDKLHQQGVFFNRGLYFATPEPFSIVRFDLESGVWERPVGELPGQ 253
           W R  N  G +   L      Q V  +  LYF   +P  +V +D+ +GVW++ +   P  
Sbjct: 215 WSRPGNMPGSMNLPLSLNFRSQTVSIDSTLYFMRSDPEGVVSYDMATGVWKQYIIPAPLH 274

Query: 254 LTFARLVSDGEGKLYLIGGVGNNGISRSMKLWELGEAG-DWVEVQSLPELMCRKFVSVCY 312
           LT   L ++ +G++ L+G +  N  +  + +WEL      W EV  +P + C  F    Y
Sbjct: 275 LTDHTL-AEYDGQIMLVGLLTKNAAT-CVCIWELQRMTLLWKEVDRMPNIWCLDF----Y 328

Query: 313 HKYEHVYCFWHEG--MICICCYTWPEILYYLVSRRTWHWLPRC 353
            K+  + C  ++G  M+ +       ++ Y ++++ W  +P C
Sbjct: 329 GKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIAKKEWLKVPGC 371


>Medtr3g085160.1 | F-box only-like protein | HC |
           chr3:38481986-38477479 | 20130731
          Length = 465

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 139/343 (40%), Gaps = 27/343 (7%)

Query: 25  MDPKIWSKLPPEILEYILSFLPLKTLLNLRSTCKGFWSLVXXXXXXXXXXXXXXXXXXXX 84
           M+ +IW   P ++ E +++ LP+      RS C+ + SL+                    
Sbjct: 111 MEQEIWKDFPEDLFEAVIARLPIAAFFRFRSVCRQWNSLLASQSFSKQCAEVPQENPWFY 170

Query: 85  XXXXXXXHRHYPLYDCTLGTWRNIXXXXXXXXXXXXXXXXXXGGLFCLSDSMSCSLLIFN 144
                  +    +YD +L  W +                   GGL C  D    +  + N
Sbjct: 171 TITHENVNSG-AMYDPSLKKWHH-PSISPLPTKLIVLPVASAGGLVCFLDIGHRNFYVCN 228

Query: 145 LLAKTSRKIQYPSYSLHLEHLTFV-------TTPSGYIIFSLFSASATNRAFVYDSEVRS 197
            L ++ +++  P+ S+ +     V       +  SGY I  +          VYDS   S
Sbjct: 229 PLTQSFKEL--PARSVKVWSRVAVGMTVNRNSIGSGYKILWV---GCDGEYEVYDSVKNS 283

Query: 198 WRR-FNGFGPI---LGDKLHQQGVFFNRGLYFATPEPFSIVRFDLESGVWERPVGELPGQ 253
           W R  N  G +   L      Q V  +  LYF   +P  +V +D+ +GVW++ +   P  
Sbjct: 284 WSRPGNMPGSMNLPLSLNFRSQTVSIDSTLYFMRSDPEGVVSYDMATGVWKQYIIPAPLH 343

Query: 254 LTFARLVSDGEGKLYLIGGVGNNGISRSMKLWELGEAG-DWVEVQSLPELMCRKFVSVCY 312
           LT   L ++ +G++ L+G +  N  +  + +WEL      W EV  +P + C  F    Y
Sbjct: 344 LTDHTL-AEYDGQIMLVGLLTKNAAT-CVCIWELQRMTLLWKEVDRMPNIWCLDF----Y 397

Query: 313 HKYEHVYCFWHEG--MICICCYTWPEILYYLVSRRTWHWLPRC 353
            K+  + C  ++G  M+ +       ++ Y ++++ W  +P C
Sbjct: 398 GKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIAKKEWLKVPGC 440


>Medtr1g033280.1 | F-box only-like protein | LC |
           chr1:11953743-11954876 | 20130731
          Length = 377

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 113/295 (38%), Gaps = 47/295 (15%)

Query: 21  MMMKMDPKIWSKLPPEILEYILSFLPLKTLLNLRSTCKGFWSLVXXXXXXXXXXXXXXXX 80
           M   M P+IW K P ++ E +L+ LP+  ++  R+ C+ + +L+                
Sbjct: 20  MTEVMKPEIWEKFPEDLFEVVLARLPMAKIICFRTVCQQWNNLI-----TSQSFSQQCSK 74

Query: 81  XXXXXXXXXXXHRHY---PLYDCTLGTWRNIXXXXXXXXXXXXXXXXXXGGLFCLSDSMS 137
                      H HY    +YD  +  W N                   GGL C  D   
Sbjct: 75  VSQVNPWFCISHGHYNYKTIYDPCMKRWYN-PKLFDNKPGQYPRLVCSAGGLVCFEDDGY 133

Query: 138 CS--------------LLIFNLLAKTSRKIQYPSYSLHLEHLTFVT--TPSGYIIFSLFS 181
            S              L + N + ++ +K+  P  S+ +  L  +T    +GY +  L  
Sbjct: 134 LSSIFSFAEDLYRRTILYVCNPITQSFKKL--PIGSIKIWRLLGMTMNVSAGYRVLKL-- 189

Query: 182 ASATNRAF-VYDSEVRSWRRFNGFGPILGDKLHQ---QGVFFNRGLYFATPEPFSIVRFD 237
               +R F +YDS  + W       PI   KL       V  +  LYF   +P  I   D
Sbjct: 190 --GCDRTFEIYDSITKCWSHLKKI-PICIKKLDDTISNIVSIDTTLYFKHKDPEGISSCD 246

Query: 238 LESGVWERPVGELP---GQLTFARLVSDGEGKLYLIGGVGNNGISRSMKLWELGE 289
             +GVW + + ++P     LT A    + +G++ L G +G    +  + +WE+ +
Sbjct: 247 TSTGVWTQHLIQVPLHSSDLTLA----ESDGRIMLFGLIG----ASCLCIWEVQK 293


>Medtr4g094748.1 | unusual floral organs-like protein | HC |
           chr4:38887061-38885727 | 20130731
          Length = 444

 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 6/141 (4%)

Query: 217 VFFNRGLYFATPEPFSIVRFDLESGVWERPVGELPGQLTFARLVSDGEGKLYLIGGVGNN 276
           V+ N   Y     PFS++ +D+ +  W +    +   L    LV + +GKL L+  V  +
Sbjct: 271 VYSNGKFYCMNCSPFSVLAYDVATNAWFKIQAPMRRFLRSPNLV-ECKGKLLLVAAVEKS 329

Query: 277 --GISRSMKLWELGEAGD-WVEVQSLPELMCRKFVSVCYHKYEHVYCFWHEGMICICCYT 333
              + +S+++W L   G  WVE + +P+ +  +F  +         C  +   I I    
Sbjct: 330 KLNVPKSLRVWCLQGCGSVWVESERMPQQLYVQFAEM--ENGNGFECVGNGEFIVIMIKG 387

Query: 334 WPEILYYLVSRRTWHWLPRCP 354
             + L Y + R+ W W+P CP
Sbjct: 388 SDKGLVYDIGRKRWQWIPPCP 408