Miyakogusa Predicted Gene

Lj5g3v0308670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0308670.1 tr|P93166|P93166_SOYBN SCOF-1 OS=Glycine max
GN=scof-1 PE=2 SV=1,67.46,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; zf-C2H2_6,NULL; seg,NULL; ZINC_FINGER_C2H2_1,Zinc
f,CUFF.52806.1
         (239 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g018420.1 | C2H2-type zinc finger protein | HC | chr1:5294...   202   2e-52
Medtr3g102980.1 | C2H2-type zinc finger protein | HC | chr3:4743...   152   3e-37
Medtr1g106730.1 | C2H2-type zinc finger protein | HC | chr1:4824...   121   4e-28
Medtr4g027440.1 | Cys2/His2 zinc-finger transcription factor | H...    72   6e-13
Medtr0160s0030.1 | C2H2-type zinc finger protein, putative | HC ...    68   7e-12
Medtr4g028610.1 | Cys2/His2 zinc-finger transcription factor | H...    67   1e-11
Medtr7g100100.1 | Cys2-His2 zinc finger transcription factor | H...    65   5e-11
Medtr7g023560.1 | C2H2-type zinc finger protein | HC | chr7:7688...    64   1e-10
Medtr1g062780.1 | C2H2-type zinc finger protein | HC | chr1:2750...    64   1e-10
Medtr1g115345.1 | C2H2-type zinc finger protein | HC | chr1:5205...    60   3e-09
Medtr1g052185.1 | C2H2 and C2HC zinc finger protein | LC | chr1:...    51   1e-06

>Medtr1g018420.1 | C2H2-type zinc finger protein | HC |
           chr1:5294238-5295310 | 20130731
          Length = 232

 Score =  202 bits (514), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/244 (50%), Positives = 137/244 (56%), Gaps = 17/244 (6%)

Query: 1   MAMEALNSPTTTAPSFTFNDHPTLRHPAEPWAXXXXXXXXXXXXXXXYLALCLIMLARGG 60
           MA+EALNSPT+T P FTF D P L     PW                YLALCLIMLARG 
Sbjct: 1   MALEALNSPTSTTPKFTF-DEPNL-----PWTKRKRSKRSRSCTEEEYLALCLIMLARGH 54

Query: 61  XXXXXXXXXX---XXXXXXSGSSRLSYKCSVCDKAFPSYQALGGHKASHRKHS-GGGGED 116
                              + +++LSYKCSVC+K F SYQALGGHKASHRK+S GGGG+D
Sbjct: 55  TNRHDFNPLNPPPTTIDNNNNNTKLSYKCSVCNKEFSSYQALGGHKASHRKNSVGGGGDD 114

Query: 117 HXXXXXXXXXXXXXXXXXXXXXXKAHECSICHKSFPTGQALGGHKRCHYXXXXXXXXXXX 176
           H                      ++HECSICH+SFPTGQALGGHKRCHY           
Sbjct: 115 H---PSTSSAATTSSANTNGGGVRSHECSICHRSFPTGQALGGHKRCHY--EGVVGGGAS 169

Query: 177 XXXXXXXXXXXXXXXRDFDLNIPALPEFPSTKAGEDEVESPHPV-MKKKQRVFMIPKIEI 235
                          RDFDLNIPA PEF + K GEDEVESPHPV MKKK RVF++PKIEI
Sbjct: 170 AVTVSEGMGSTHSHQRDFDLNIPAFPEF-ANKVGEDEVESPHPVMMKKKARVFVVPKIEI 228

Query: 236 PQLH 239
           P   
Sbjct: 229 PNFQ 232


>Medtr3g102980.1 | C2H2-type zinc finger protein | HC |
           chr3:47436584-47435455 | 20130731
          Length = 236

 Score =  152 bits (383), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 113/241 (46%), Gaps = 13/241 (5%)

Query: 1   MAMEALNSPTTTAPSFTFNDHPTLRHPAEPWAXXXXXXXXXXXXXX----XYLALCLIML 56
           MAMEALNSPTT  P FT  + P L +   PW                    YLALCLIML
Sbjct: 1   MAMEALNSPTTATP-FTPFEEPNLSYLETPWTKGKRSKRSRMDQSSCTEEEYLALCLIML 59

Query: 57  ARGGXXXXXXXXXXXXXXXXSGSSRLSYKCSVCDKAFPSYQALGGHKASHRKHSGGGGED 116
           AR G                + + +LS+KCSVC+KAF SYQALGGHKASHRK        
Sbjct: 60  ARSGNNNDNKTESVPVPAPLT-TVKLSHKCSVCNKAFSSYQALGGHKASHRKAVMSATT- 117

Query: 117 HXXXXXXXXXXXXXXXXXXXXXXKAHECSICHKSFPTGQALGGHKRCHYXXXXXXXXXXX 176
                                  K HECSICHKSFPTGQALGGHKRCHY           
Sbjct: 118 -VEDQTTTTSSAVTTSSASNGKNKTHECSICHKSFPTGQALGGHKRCHYEGSVGAGAGSS 176

Query: 177 XXXXXXXXXXXX-XXXRDFDLNIPALPEFPSTKAGEDEVESPHPVMKKKQRVFMIPKIEI 235
                           RDFDLN+PA P+F      +DEV SP P  KK      + K+EI
Sbjct: 177 AVTAASEGVGSSHSHHRDFDLNLPAFPDFSKKFFVDDEVSSPLPAAKKP----CLFKLEI 232

Query: 236 P 236
           P
Sbjct: 233 P 233


>Medtr1g106730.1 | C2H2-type zinc finger protein | HC |
           chr1:48248085-48249261 | 20130731
          Length = 251

 Score =  121 bits (304), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 91/206 (44%), Gaps = 47/206 (22%)

Query: 48  YLALCLIMLARGGXXXXXXXXXXXXXXXXSGSSRLSYKCSVCDKAFPSYQALGGHKASHR 107
           YLALCLIML++                  S   +L++KCSVC+KAFPSYQALGGHKASHR
Sbjct: 59  YLALCLIMLSQSNNQIQ------------SSPLKLNHKCSVCNKAFPSYQALGGHKASHR 106

Query: 108 KHSGGGGEDHXXXXXXXXXXXXXXXXXXXXXXKAHECSICHKSFPTGQALGGHKRCHYXX 167
           K S                             K HECSICHKSFPTGQALGGHKRCHY  
Sbjct: 107 KSS----------SENQSTTVNETISVSVSTSKMHECSICHKSFPTGQALGGHKRCHYEG 156

Query: 168 XXXXXXXXXX------XXXXXXXXXXXXXXRDFDLNIPA-LPEFPS-------------- 206
                                         R FDLN+PA L EF S              
Sbjct: 157 VINNNHNHNNSNSSGITVSDAGAASSSISHRGFDLNLPAPLTEFWSPVGFGGGDSKKNKV 216

Query: 207 ----TKAGEDEVESPHPVMKKKQRVF 228
                   E EVESP PV  K+ R+F
Sbjct: 217 NVNLAGINEQEVESPLPVTAKRPRLF 242


>Medtr4g027440.1 | Cys2/His2 zinc-finger transcription factor | HC |
           chr4:9546941-9545698 | 20130731
          Length = 378

 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 42/84 (50%)

Query: 81  RLSYKCSVCDKAFPSYQALGGHKASHRKHSGGGGEDHXXXXXXXXXXXXXXXXXXXXXXK 140
           R  YKC  C+K F SYQALGGH+ASH+K+                              K
Sbjct: 217 RGRYKCDTCNKVFRSYQALGGHRASHKKNKQVAESGGDYSISQHHEKINIEKNINVSEKK 276

Query: 141 AHECSICHKSFPTGQALGGHKRCH 164
            HEC IC + F +GQALGGH+R H
Sbjct: 277 IHECPICFREFASGQALGGHRRTH 300


>Medtr0160s0030.1 | C2H2-type zinc finger protein, putative | HC |
           scaffold0160:20867-19377 | 20130731
          Length = 361

 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 40/81 (49%), Gaps = 12/81 (14%)

Query: 84  YKCSVCDKAFPSYQALGGHKASHRKHSGGGGEDHXXXXXXXXXXXXXXXXXXXXXXKAHE 143
           YKC  C+K F SYQALGGH+ASH+K                               K HE
Sbjct: 240 YKCETCNKVFKSYQALGGHRASHKK------------IKPNITVEESSPEFEIVEKKVHE 287

Query: 144 CSICHKSFPTGQALGGHKRCH 164
           C +C + F +GQALGGHKR H
Sbjct: 288 CPVCFRVFNSGQALGGHKRTH 308


>Medtr4g028610.1 | Cys2/His2 zinc-finger transcription factor | HC |
           chr4:9613625-9612168 | 20130731
          Length = 485

 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 50/115 (43%), Gaps = 27/115 (23%)

Query: 78  GSSRLSYKCSVCDKAFPSYQALGGHKASHRKHSGGGG------------EDHXXXXXX-- 123
           G ++  ++C  C K F S+QALGGH+ASH+K  G               ED         
Sbjct: 221 GVAKGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDQNPDDSIVEDDVITQDEFF 280

Query: 124 -------------XXXXXXXXXXXXXXXXKAHECSICHKSFPTGQALGGHKRCHY 165
                                        K HECSICH+SF +GQALGGHKRCH+
Sbjct: 281 PSKPNSTLQYDHGTSNNPTLMASSSKRKSKVHECSICHRSFSSGQALGGHKRCHW 335


>Medtr7g100100.1 | Cys2-His2 zinc finger transcription factor | HC |
           chr7:40244051-40243268 | 20130731
          Length = 165

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 41/81 (50%), Gaps = 9/81 (11%)

Query: 84  YKCSVCDKAFPSYQALGGHKASHRKHSGGGGEDHXXXXXXXXXXXXXXXXXXXXXXKAHE 143
           Y+C  C+K F S+QALGGH+ASH++     GE+                       K HE
Sbjct: 34  YECKTCNKKFSSFQALGGHRASHKRMKLAEGEE---------LKEQAKSLSLWNKPKMHE 84

Query: 144 CSICHKSFPTGQALGGHKRCH 164
           CSIC   F  GQALGGH R H
Sbjct: 85  CSICGMGFSLGQALGGHMRKH 105


>Medtr7g023560.1 | C2H2-type zinc finger protein | HC |
           chr7:7688191-7687352 | 20130731
          Length = 184

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 19/116 (16%)

Query: 49  LALCLIMLARGGXXXXXXXXXXXXXXXXSGSSRLSYKCSVCDKAFPSYQALGGHKASHRK 108
           +A CL++L+RG                 + S+   ++C  C++ FPS+QALGGH+ASH+K
Sbjct: 12  MANCLMLLSRGSDQFEATYSS-------TTSNNRVFECKTCNRQFPSFQALGGHRASHKK 64

Query: 109 HSGGGGEDHXXXXXXXXXXXXXXXXXXXXXXKAHECSICHKSFPTGQALGGHKRCH 164
               G                          K HECSIC   F  GQALGGH R H
Sbjct: 65  PRLMG------------ENIDGQLLHTPPKPKTHECSICGLEFAIGQALGGHMRRH 108


>Medtr1g062780.1 | C2H2-type zinc finger protein | HC |
           chr1:27509884-27508558 | 20130731
          Length = 297

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 57/141 (40%), Gaps = 25/141 (17%)

Query: 49  LALCLIMLARGGXXXXXXXXXXXXXXXXSGSSRLS----YKCSVCDKAFPSYQALGGHKA 104
           LA CLI+LARG                   +++ S    Y+C  C++ FPS+QALGGH+A
Sbjct: 81  LANCLILLARGHNHRHDYQNTHVSNHRDHNNNKSSNFYLYECKTCNRCFPSFQALGGHRA 140

Query: 105 SHRK---------------HSGGGGEDHXXXXXXXXXXXXX------XXXXXXXXXKAHE 143
           SH K                +    +DH                            K HE
Sbjct: 141 SHTKPNKANCNVAQQKQAVTTSSFVDDHYDPTMNTILSLQAFAATPITTIPTTKKSKVHE 200

Query: 144 CSICHKSFPTGQALGGHKRCH 164
           CSIC   F +GQALGGH R H
Sbjct: 201 CSICGAEFSSGQALGGHMRRH 221


>Medtr1g115345.1 | C2H2-type zinc finger protein | HC |
           chr1:52052229-52053348 | 20130731
          Length = 205

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 40/85 (47%), Gaps = 15/85 (17%)

Query: 84  YKCSVCDKAFPSYQALGGHKASHRK----HSGGGGEDHXXXXXXXXXXXXXXXXXXXXXX 139
           ++C  C + F S+QALGGH+ASH+K         G+DH                      
Sbjct: 45  FECKTCKRQFSSFQALGGHRASHKKPRLMEMTSDGDDH-----------HGSILTSTTKA 93

Query: 140 KAHECSICHKSFPTGQALGGHKRCH 164
           K H CSIC   F  GQALGGH R H
Sbjct: 94  KTHACSICGLEFGIGQALGGHMRRH 118


>Medtr1g052185.1 | C2H2 and C2HC zinc finger protein | LC |
           chr1:21073526-21074362 | 20130731
          Length = 278

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 84  YKCSVCDKAFPSYQALGGHKASHRKHSGGGGEDHXXXXXXXXXXXXXXXXXXXXXXKAHE 143
           Y+C +C K F S  ALGGHK SHR       + H                        H 
Sbjct: 33  YECELCGKRFNSGAALGGHKTSHRSQPQNKKQRHNHAVNKDDKDDEKQ---------KHC 83

Query: 144 CSICHKSFPTGQALGGHKRCH 164
           C +C+K F + QAL GH RCH
Sbjct: 84  CRVCNKVFSSKQALCGHMRCH 104