Miyakogusa Predicted Gene

Lj5g3v0308380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0308380.1 tr|Q60DE9|Q60DE9_ORYSJ Os05g0443700 protein
OS=Oryza sativa subsp. japonica GN=B1110B01.19 PE=2
SV=1,46.58,2e-18,t-snare proteins,t-SNARE; seg,NULL;
Syntaxin-6_N,Syntaxin 6, N-terminal; no description,NULL,CUFF.52789.1
         (339 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g018550.1 | syntaxin 6, amine-terminal protein | HC | chr1...   437   e-123
Medtr1g018550.2 | syntaxin 6, amine-terminal protein | HC | chr1...   436   e-122
Medtr3g102790.1 | syntaxin 6, amine-terminal protein | HC | chr3...   360   2e-99
Medtr3g102790.2 | syntaxin 6, amine-terminal protein | HC | chr3...   359   2e-99
Medtr4g128220.6 | syntaxin/T-SNARE family protein | HC | chr4:53...   145   5e-35
Medtr4g128220.1 | syntaxin/T-SNARE family protein | HC | chr4:53...   145   5e-35
Medtr4g128220.3 | syntaxin/T-SNARE family protein | HC | chr4:53...   145   5e-35
Medtr4g128220.4 | syntaxin/T-SNARE family protein | HC | chr4:53...   145   5e-35
Medtr4g128220.8 | syntaxin/T-SNARE family protein | HC | chr4:53...   145   5e-35
Medtr4g128220.5 | syntaxin/T-SNARE family protein | HC | chr4:53...   145   5e-35
Medtr4g128220.7 | syntaxin/T-SNARE family protein | HC | chr4:53...   145   5e-35
Medtr4g128220.2 | syntaxin/T-SNARE family protein | HC | chr4:53...   145   5e-35

>Medtr1g018550.1 | syntaxin 6, amine-terminal protein | HC |
           chr1:5385012-5387942 | 20130731
          Length = 324

 Score =  437 bits (1123), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/324 (68%), Positives = 250/324 (77%), Gaps = 25/324 (7%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           MASSFDRWEKDPFF+AAEEVQESADRM+S YRTW+HATKDTSSMWN +ELRRDL TTLGT
Sbjct: 1   MASSFDRWEKDPFFSAAEEVQESADRMESTYRTWIHATKDTSSMWNPNELRRDLLTTLGT 60

Query: 61  AKWQLEEFERAARLNYSRTSG-EARTRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
           AKWQLEEFER  RL+YSR  G +ARTRH+DFITAIE+KI KVEH L E++  G KAS  W
Sbjct: 61  AKWQLEEFEREVRLSYSRNLGDDARTRHRDFITAIEEKIKKVEHALDETNPPGRKASQTW 120

Query: 120 IHLDEGEQDELASFLSGMPAAESNDPTWSKSRDGENPQLSDNDLVINCSKNVHISSGLGE 179
           + LDEGE+DELA FLSGMPA ESN           NP+L + +          ++SG+GE
Sbjct: 121 VILDEGEKDELALFLSGMPATESN-----------NPRLYNKN---------SVASGVGE 160

Query: 180 AKEETPRGHRRAASASADIGFWKISV--ADDAQQXXXXXXXXXPMHKVPSLSGFVSAME- 236
            KEE  RGHRRAASASADIGFWKISV                 PMHKVPSLSGF+S++E 
Sbjct: 161 EKEEVSRGHRRAASASADIGFWKISVSDDPQQSSSSSGSSGPNPMHKVPSLSGFLSSVES 220

Query: 237 -SKMKWPRNGYRKLKVVDHHKETKSTLLPTAETNKGNMACYGRSKSSLKSCDECYDKNLY 295
            SK+KWPRNGYRKLK VDHHKET S L+P AE N+GN ACY RSKSSL S DECYDK+LY
Sbjct: 221 ISKLKWPRNGYRKLKTVDHHKETDSALIPMAELNRGNNACYERSKSSLDSSDECYDKHLY 280

Query: 296 GWYGAIRRQLQRSQYQMQYSQPVR 319
           GW GAI+RQLQRSQYQMQYS+PVR
Sbjct: 281 GWCGAIQRQLQRSQYQMQYSRPVR 304


>Medtr1g018550.2 | syntaxin 6, amine-terminal protein | HC |
           chr1:5385012-5387461 | 20130731
          Length = 320

 Score =  436 bits (1122), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/324 (68%), Positives = 250/324 (77%), Gaps = 25/324 (7%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           MASSFDRWEKDPFF+AAEEVQESADRM+S YRTW+HATKDTSSMWN +ELRRDL TTLGT
Sbjct: 1   MASSFDRWEKDPFFSAAEEVQESADRMESTYRTWIHATKDTSSMWNPNELRRDLLTTLGT 60

Query: 61  AKWQLEEFERAARLNYSRTSG-EARTRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
           AKWQLEEFER  RL+YSR  G +ARTRH+DFITAIE+KI KVEH L E++  G KAS  W
Sbjct: 61  AKWQLEEFEREVRLSYSRNLGDDARTRHRDFITAIEEKIKKVEHALDETNPPGRKASQTW 120

Query: 120 IHLDEGEQDELASFLSGMPAAESNDPTWSKSRDGENPQLSDNDLVINCSKNVHISSGLGE 179
           + LDEGE+DELA FLSGMPA ESN           NP+L + +          ++SG+GE
Sbjct: 121 VILDEGEKDELALFLSGMPATESN-----------NPRLYNKN---------SVASGVGE 160

Query: 180 AKEETPRGHRRAASASADIGFWKISV--ADDAQQXXXXXXXXXPMHKVPSLSGFVSAME- 236
            KEE  RGHRRAASASADIGFWKISV                 PMHKVPSLSGF+S++E 
Sbjct: 161 EKEEVSRGHRRAASASADIGFWKISVSDDPQQSSSSSGSSGPNPMHKVPSLSGFLSSVES 220

Query: 237 -SKMKWPRNGYRKLKVVDHHKETKSTLLPTAETNKGNMACYGRSKSSLKSCDECYDKNLY 295
            SK+KWPRNGYRKLK VDHHKET S L+P AE N+GN ACY RSKSSL S DECYDK+LY
Sbjct: 221 ISKLKWPRNGYRKLKTVDHHKETDSALIPMAELNRGNNACYERSKSSLDSSDECYDKHLY 280

Query: 296 GWYGAIRRQLQRSQYQMQYSQPVR 319
           GW GAI+RQLQRSQYQMQYS+PVR
Sbjct: 281 GWCGAIQRQLQRSQYQMQYSRPVR 304


>Medtr3g102790.1 | syntaxin 6, amine-terminal protein | HC |
           chr3:47360247-47356639 | 20130731
          Length = 331

 Score =  360 bits (923), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 192/327 (58%), Positives = 224/327 (68%), Gaps = 24/327 (7%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           MASSFDRWEKDPFFNAAEEVQESADR++S YRTW+HA KD SS WNS ELRRDL T LGT
Sbjct: 1   MASSFDRWEKDPFFNAAEEVQESADRVESIYRTWIHAVKDASSPWNSVELRRDLHTALGT 60

Query: 61  AKWQLEEFERAAR-LNYSRTSGEARTRHQDFITAIEDKITKVEHL--LHESSTTGS-KAS 116
           AK QL+EF+RA R      +S + R RHQDF+ AI+ K++KVEHL  L ES   GS K S
Sbjct: 61  AKLQLDEFQRAVRSSYSKSSSNDTRNRHQDFLVAIDGKVSKVEHLLQLQESVPLGSNKVS 120

Query: 117 MPWIHLDEGEQDELASFLSG--MPAAESNDPTWSKSRDGENPQLSDNDLVINCSKNVHIS 174
            PW+ LDEGE++ELASFLSG  MP+A    P     RDGENPQLSD             +
Sbjct: 121 PPWVSLDEGERNELASFLSGMPMPSAGGKPPLKCTCRDGENPQLSD-------------A 167

Query: 175 SGLGEAKEETPRGHRRAASASADIGFWKISVADDAQQXXXXXXXXXPMHKVPSLSGFVSA 234
           +     +EE   GHRR ASA  DI  WKI+V DD QQ         P+HKV SLSGF S+
Sbjct: 168 NSFRAMEEEKQHGHRRVASADVDISSWKIAVLDDVQQSTSSNDSSGPLHKVASLSGFFSS 227

Query: 235 ME--SKMKWPRNGYRKLKVVDHHKETKSTLLPTAETNKGNMACYGRSKSSLKSCDECYDK 292
           +E  SK KWP+NGYRKLK   HH+E  + LLP+ E N    A   RSKS +  CDECYDK
Sbjct: 228 VESISKFKWPKNGYRKLKAGYHHQEIDNALLPSTEFNG---ATNERSKSCVSRCDECYDK 284

Query: 293 NLYGWYGAIRRQLQRSQYQMQYSQPVR 319
            L+GWYGA +RQLQRSQYQMQY++PV+
Sbjct: 285 PLHGWYGAFQRQLQRSQYQMQYNRPVQ 311


>Medtr3g102790.2 | syntaxin 6, amine-terminal protein | HC |
           chr3:47360247-47356639 | 20130731
          Length = 326

 Score =  359 bits (922), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 192/327 (58%), Positives = 224/327 (68%), Gaps = 24/327 (7%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           MASSFDRWEKDPFFNAAEEVQESADR++S YRTW+HA KD SS WNS ELRRDL T LGT
Sbjct: 1   MASSFDRWEKDPFFNAAEEVQESADRVESIYRTWIHAVKDASSPWNSVELRRDLHTALGT 60

Query: 61  AKWQLEEFERAAR-LNYSRTSGEARTRHQDFITAIEDKITKVEHL--LHESSTTGS-KAS 116
           AK QL+EF+RA R      +S + R RHQDF+ AI+ K++KVEHL  L ES   GS K S
Sbjct: 61  AKLQLDEFQRAVRSSYSKSSSNDTRNRHQDFLVAIDGKVSKVEHLLQLQESVPLGSNKVS 120

Query: 117 MPWIHLDEGEQDELASFLSG--MPAAESNDPTWSKSRDGENPQLSDNDLVINCSKNVHIS 174
            PW+ LDEGE++ELASFLSG  MP+A    P     RDGENPQLSD             +
Sbjct: 121 PPWVSLDEGERNELASFLSGMPMPSAGGKPPLKCTCRDGENPQLSD-------------A 167

Query: 175 SGLGEAKEETPRGHRRAASASADIGFWKISVADDAQQXXXXXXXXXPMHKVPSLSGFVSA 234
           +     +EE   GHRR ASA  DI  WKI+V DD QQ         P+HKV SLSGF S+
Sbjct: 168 NSFRAMEEEKQHGHRRVASADVDISSWKIAVLDDVQQSTSSNDSSGPLHKVASLSGFFSS 227

Query: 235 ME--SKMKWPRNGYRKLKVVDHHKETKSTLLPTAETNKGNMACYGRSKSSLKSCDECYDK 292
           +E  SK KWP+NGYRKLK   HH+E  + LLP+ E N    A   RSKS +  CDECYDK
Sbjct: 228 VESISKFKWPKNGYRKLKAGYHHQEIDNALLPSTEFNG---ATNERSKSCVSRCDECYDK 284

Query: 293 NLYGWYGAIRRQLQRSQYQMQYSQPVR 319
            L+GWYGA +RQLQRSQYQMQY++PV+
Sbjct: 285 PLHGWYGAFQRQLQRSQYQMQYNRPVQ 311


>Medtr4g128220.6 | syntaxin/T-SNARE family protein | HC |
           chr4:53368706-53364832 | 20130731
          Length = 340

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 99/137 (72%), Gaps = 1/137 (0%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           +A+SFD W KD FF+AAEEVQESAD M+SAYR WL   ++ S+    +EL R+LQT LGT
Sbjct: 3   VANSFDLWRKDAFFSAAEEVQESADIMESAYRAWLRERRERSNPEELNELCRELQTALGT 62

Query: 61  AKWQLEEFERAARLNYSRTSGEAR-TRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
           AKWQLEE E+A RL+Y     + R TRH+ FI+AIE +I++VE  L ES+    K  + W
Sbjct: 63  AKWQLEELEKAIRLSYRHLGDDNRATRHRQFISAIESQISQVEADLRESNIEEGKQPLRW 122

Query: 120 IHLDEGEQDELASFLSG 136
           ++LDE E+D+ A+FLSG
Sbjct: 123 VNLDEEERDDFAAFLSG 139


>Medtr4g128220.1 | syntaxin/T-SNARE family protein | HC |
           chr4:53368706-53364832 | 20130731
          Length = 340

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 99/137 (72%), Gaps = 1/137 (0%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           +A+SFD W KD FF+AAEEVQESAD M+SAYR WL   ++ S+    +EL R+LQT LGT
Sbjct: 3   VANSFDLWRKDAFFSAAEEVQESADIMESAYRAWLRERRERSNPEELNELCRELQTALGT 62

Query: 61  AKWQLEEFERAARLNYSRTSGEAR-TRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
           AKWQLEE E+A RL+Y     + R TRH+ FI+AIE +I++VE  L ES+    K  + W
Sbjct: 63  AKWQLEELEKAIRLSYRHLGDDNRATRHRQFISAIESQISQVEADLRESNIEEGKQPLRW 122

Query: 120 IHLDEGEQDELASFLSG 136
           ++LDE E+D+ A+FLSG
Sbjct: 123 VNLDEEERDDFAAFLSG 139


>Medtr4g128220.3 | syntaxin/T-SNARE family protein | HC |
           chr4:53368704-53364832 | 20130731
          Length = 340

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 99/137 (72%), Gaps = 1/137 (0%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           +A+SFD W KD FF+AAEEVQESAD M+SAYR WL   ++ S+    +EL R+LQT LGT
Sbjct: 3   VANSFDLWRKDAFFSAAEEVQESADIMESAYRAWLRERRERSNPEELNELCRELQTALGT 62

Query: 61  AKWQLEEFERAARLNYSRTSGEAR-TRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
           AKWQLEE E+A RL+Y     + R TRH+ FI+AIE +I++VE  L ES+    K  + W
Sbjct: 63  AKWQLEELEKAIRLSYRHLGDDNRATRHRQFISAIESQISQVEADLRESNIEEGKQPLRW 122

Query: 120 IHLDEGEQDELASFLSG 136
           ++LDE E+D+ A+FLSG
Sbjct: 123 VNLDEEERDDFAAFLSG 139


>Medtr4g128220.4 | syntaxin/T-SNARE family protein | HC |
           chr4:53368706-53364832 | 20130731
          Length = 340

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 99/137 (72%), Gaps = 1/137 (0%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           +A+SFD W KD FF+AAEEVQESAD M+SAYR WL   ++ S+    +EL R+LQT LGT
Sbjct: 3   VANSFDLWRKDAFFSAAEEVQESADIMESAYRAWLRERRERSNPEELNELCRELQTALGT 62

Query: 61  AKWQLEEFERAARLNYSRTSGEAR-TRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
           AKWQLEE E+A RL+Y     + R TRH+ FI+AIE +I++VE  L ES+    K  + W
Sbjct: 63  AKWQLEELEKAIRLSYRHLGDDNRATRHRQFISAIESQISQVEADLRESNIEEGKQPLRW 122

Query: 120 IHLDEGEQDELASFLSG 136
           ++LDE E+D+ A+FLSG
Sbjct: 123 VNLDEEERDDFAAFLSG 139


>Medtr4g128220.8 | syntaxin/T-SNARE family protein | HC |
           chr4:53368706-53364832 | 20130731
          Length = 340

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 99/137 (72%), Gaps = 1/137 (0%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           +A+SFD W KD FF+AAEEVQESAD M+SAYR WL   ++ S+    +EL R+LQT LGT
Sbjct: 3   VANSFDLWRKDAFFSAAEEVQESADIMESAYRAWLRERRERSNPEELNELCRELQTALGT 62

Query: 61  AKWQLEEFERAARLNYSRTSGEAR-TRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
           AKWQLEE E+A RL+Y     + R TRH+ FI+AIE +I++VE  L ES+    K  + W
Sbjct: 63  AKWQLEELEKAIRLSYRHLGDDNRATRHRQFISAIESQISQVEADLRESNIEEGKQPLRW 122

Query: 120 IHLDEGEQDELASFLSG 136
           ++LDE E+D+ A+FLSG
Sbjct: 123 VNLDEEERDDFAAFLSG 139


>Medtr4g128220.5 | syntaxin/T-SNARE family protein | HC |
           chr4:53368706-53364832 | 20130731
          Length = 340

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 99/137 (72%), Gaps = 1/137 (0%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           +A+SFD W KD FF+AAEEVQESAD M+SAYR WL   ++ S+    +EL R+LQT LGT
Sbjct: 3   VANSFDLWRKDAFFSAAEEVQESADIMESAYRAWLRERRERSNPEELNELCRELQTALGT 62

Query: 61  AKWQLEEFERAARLNYSRTSGEAR-TRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
           AKWQLEE E+A RL+Y     + R TRH+ FI+AIE +I++VE  L ES+    K  + W
Sbjct: 63  AKWQLEELEKAIRLSYRHLGDDNRATRHRQFISAIESQISQVEADLRESNIEEGKQPLRW 122

Query: 120 IHLDEGEQDELASFLSG 136
           ++LDE E+D+ A+FLSG
Sbjct: 123 VNLDEEERDDFAAFLSG 139


>Medtr4g128220.7 | syntaxin/T-SNARE family protein | HC |
           chr4:53368704-53364832 | 20130731
          Length = 340

 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 99/137 (72%), Gaps = 1/137 (0%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           +A+SFD W KD FF+AAEEVQESAD M+SAYR WL   ++ S+    +EL R+LQT LGT
Sbjct: 3   VANSFDLWRKDAFFSAAEEVQESADIMESAYRAWLRERRERSNPEELNELCRELQTALGT 62

Query: 61  AKWQLEEFERAARLNYSRTSGEAR-TRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
           AKWQLEE E+A RL+Y     + R TRH+ FI+AIE +I++VE  L ES+    K  + W
Sbjct: 63  AKWQLEELEKAIRLSYRHLGDDNRATRHRQFISAIESQISQVEADLRESNIEEGKQPLRW 122

Query: 120 IHLDEGEQDELASFLSG 136
           ++LDE E+D+ A+FLSG
Sbjct: 123 VNLDEEERDDFAAFLSG 139


>Medtr4g128220.2 | syntaxin/T-SNARE family protein | HC |
           chr4:53368706-53364832 | 20130731
          Length = 337

 Score =  145 bits (366), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 99/137 (72%), Gaps = 1/137 (0%)

Query: 1   MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
           +A+SFD W KD FF+AAEEVQESAD M+SAYR WL   ++ S+    +EL R+LQT LGT
Sbjct: 3   VANSFDLWRKDAFFSAAEEVQESADIMESAYRAWLRERRERSNPEELNELCRELQTALGT 62

Query: 61  AKWQLEEFERAARLNYSRTSGEAR-TRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
           AKWQLEE E+A RL+Y     + R TRH+ FI+AIE +I++VE  L ES+    K  + W
Sbjct: 63  AKWQLEELEKAIRLSYRHLGDDNRATRHRQFISAIESQISQVEADLRESNIEEGKQPLRW 122

Query: 120 IHLDEGEQDELASFLSG 136
           ++LDE E+D+ A+FLSG
Sbjct: 123 VNLDEEERDDFAAFLSG 139