Miyakogusa Predicted Gene

Lj5g3v0308360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0308360.1 tr|D7MA34|D7MA34_ARALL Predicted protein
(Fragment) OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAF,56.14,0.00000000000007,DUF616,Protein of unknown function
DUF616; SUBFAMILY NOT NAMED,NULL; ALKALINE
CERAMIDASE-RELATED,NUL,CUFF.52788.1
         (258 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g021670.1 | plant/MJB21-3 protein | HC | chr1:6574863-6571...   338   3e-93
Medtr8g055930.1 | transmembrane protein | HC | chr8:24361360-243...    62   7e-10
Medtr8g055930.2 | transmembrane protein | HC | chr8:24361448-243...    61   9e-10
Medtr4g088785.1 | DUF616 family protein | HC | chr4:35396054-354...    61   1e-09
Medtr2g013690.1 | DUF616 family protein | HC | chr2:3731949-3726...    61   1e-09
Medtr8g085850.3 | plant/F20M13-60 protein | HC | chr8:35596574-3...    61   1e-09
Medtr8g085850.2 | plant/F20M13-60 protein | HC | chr8:35596566-3...    60   1e-09
Medtr8g085850.1 | plant/F20M13-60 protein | HC | chr8:35596574-3...    60   1e-09
Medtr1g096320.1 | transmembrane protein | HC | chr1:43376935-433...    54   2e-07
Medtr1g096320.2 | transmembrane protein | HC | chr1:43376935-433...    54   2e-07
Medtr2g085170.1 | DUF616 family protein | HC | chr2:33286444-332...    51   1e-06
Medtr2g085170.2 | DUF616 family protein | HC | chr2:33286455-332...    51   1e-06

>Medtr1g021670.1 | plant/MJB21-3 protein | HC | chr1:6574863-6571054
           | 20130731
          Length = 469

 Score =  338 bits (867), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 169/252 (67%), Positives = 196/252 (77%), Gaps = 5/252 (1%)

Query: 1   MFHNNNSLSVSIPVSDDEPDELGXXXXXXXXXXXXLTHRRFLRKLLVRYWMLLIIIPTAC 60
           MFH+N   ++ I +SDDE DELG            L ++RF +KLLV+YWMLLIIIP A 
Sbjct: 1   MFHSN---TLPISISDDETDELGRMRVRARRKRKKLGNKRFFKKLLVKYWMLLIIIPAAF 57

Query: 61  LLFFEASRIARKPSFNVNSDIQTRTPVDRSSPPLRKET--HSNLNRLDPTTHVVAGVRER 118
           LLF+E +RI  +P  + +S     T  ++      K+T   +NLNRLDPTTHVVAGVRER
Sbjct: 58  LLFYEITRIGLRPGSSSSSSNNASTTRNQDHDDRSKDTIVKTNLNRLDPTTHVVAGVRER 117

Query: 119 CLKLLPPEKLDQLDIPVEEESRLPVGKVLYMSESDLSIPGGNATLSQLRAEDTRFNLFTG 178
           CLKLLPPEKL+QL+I VEEES LP+GKVLYMS +D S+ GGNATLSQLRAEDT FNLFTG
Sbjct: 118 CLKLLPPEKLEQLEITVEEESSLPIGKVLYMSATDASLIGGNATLSQLRAEDTSFNLFTG 177

Query: 179 NQTFEQRDRSFEVKETMMVHCGFYSENGGFKISDEDRSYMQECKVAVSTCAFGGGDDLYQ 238
           NQTFE+RDRSFEVKET   HCGFYS NGGF+ISD+D+S+MQ CKV VSTCAFGGGDDLYQ
Sbjct: 178 NQTFEERDRSFEVKETTTAHCGFYSANGGFRISDKDKSFMQGCKVVVSTCAFGGGDDLYQ 237

Query: 239 PIGMSEASLKKV 250
           PIGMSEASLKKV
Sbjct: 238 PIGMSEASLKKV 249


>Medtr8g055930.1 | transmembrane protein | HC |
           chr8:24361360-24367057 | 20130731
          Length = 470

 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 6/69 (8%)

Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFYS-----ENGGFKISDEDRSYMQECKVAVSTCAF 230
           F G+ T E+R+ SF  K    +HCGF        + GF + ++DR+YM  CKVAVS+C F
Sbjct: 161 FGGHPTLEERENSFYAK-NQTIHCGFVKGPPGYPSTGFDLDEKDRAYMSSCKVAVSSCIF 219

Query: 231 GGGDDLYQP 239
           G  D L +P
Sbjct: 220 GSSDFLRRP 228


>Medtr8g055930.2 | transmembrane protein | HC |
           chr8:24361448-24367057 | 20130731
          Length = 406

 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 6/69 (8%)

Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFYS-----ENGGFKISDEDRSYMQECKVAVSTCAF 230
           F G+ T E+R+ SF  K    +HCGF        + GF + ++DR+YM  CKVAVS+C F
Sbjct: 161 FGGHPTLEERENSFYAK-NQTIHCGFVKGPPGYPSTGFDLDEKDRAYMSSCKVAVSSCIF 219

Query: 231 GGGDDLYQP 239
           G  D L +P
Sbjct: 220 GSSDFLRRP 228


>Medtr4g088785.1 | DUF616 family protein | HC |
           chr4:35396054-35401121 | 20130731
          Length = 531

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 26/136 (19%)

Query: 133 IPVEEE-SRLP--------VGKVLYMSESDLSIPGGNATLSQLRAEDTRFNLFTGNQTFE 183
           +PVEE  +R+P        +  ++Y+ E + S           R  +   + F G  T +
Sbjct: 125 LPVEEAIARMPTLTSPSPVLQNLMYVYEENFS-----------RGAEFGGSEFGGYPTLK 173

Query: 184 QRDRSFEVKETMMVHCGFY-----SENGGFKISDEDRSYMQECK-VAVSTCAFGGGDDLY 237
           QR+ SF+V+E+M VHCGF        N GF I ++D   M +C  V V++  FG  D++ 
Sbjct: 174 QRNESFDVRESMSVHCGFVRGTKPGRNTGFDIDEDDLLEMDQCNGVVVASAIFGNFDEIN 233

Query: 238 QPIGMSEASLKKVTML 253
           +P  +S+ S K V  L
Sbjct: 234 EPKNISDYSGKTVCFL 249


>Medtr2g013690.1 | DUF616 family protein | HC | chr2:3731949-3726234
           | 20130731
          Length = 570

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 6/84 (7%)

Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFY-----SENGGFKISDEDRSYMQECK-VAVSTCA 229
           F G  T  QR+ SF+++E+M VHCGF        N GF I ++D   M++C+ + V++  
Sbjct: 206 FGGYPTLRQRNDSFDIRESMCVHCGFVRGIKPGRNTGFDIDEDDLLDMEQCQGIVVASAV 265

Query: 230 FGGGDDLYQPIGMSEASLKKVTML 253
           FG  D++ +P  +SE S + V  L
Sbjct: 266 FGNFDEVNEPKNISEHSKQTVCFL 289


>Medtr8g085850.3 | plant/F20M13-60 protein | HC |
           chr8:35596574-35600548 | 20130731
          Length = 499

 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 12/128 (9%)

Query: 129 DQLDIPVEEESRLPVGKVLYMSESDLSIPGGNATLSQLRAEDTRFNLFTGNQTFEQRDRS 188
           D++ IP    S   V  + Y +E +  IP  ++  S L         F G+ +++QR+ S
Sbjct: 114 DKIVIPTRRTSDKIVKNLSYFTEDE--IPNDSSQSSPL---------FGGHLSWKQREES 162

Query: 189 FEVKETMMVHCGFYSENGGFKISDEDRSYMQECKVAVSTCAFGGGDDLYQPIGMSEASLK 248
           F++K  M VHCGF  + GG ++   D  Y+++CK  V++  F G D  +QP  +S  S K
Sbjct: 163 FKLKSNMKVHCGFI-QGGGAEMDPIDIKYVKKCKFVVASGIFDGYDIPHQPSNISLRSKK 221

Query: 249 KVTMLYKV 256
               L  V
Sbjct: 222 LFCFLMVV 229


>Medtr8g085850.2 | plant/F20M13-60 protein | HC |
           chr8:35596566-35600550 | 20130731
          Length = 502

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 12/128 (9%)

Query: 129 DQLDIPVEEESRLPVGKVLYMSESDLSIPGGNATLSQLRAEDTRFNLFTGNQTFEQRDRS 188
           D++ IP    S   V  + Y +E +  IP  ++  S L         F G+ +++QR+ S
Sbjct: 123 DKIVIPTRRTSDKIVKNLSYFTEDE--IPNDSSQSSPL---------FGGHLSWKQREES 171

Query: 189 FEVKETMMVHCGFYSENGGFKISDEDRSYMQECKVAVSTCAFGGGDDLYQPIGMSEASLK 248
           F++K  M VHCGF  + GG ++   D  Y+++CK  V++  F G D  +QP  +S  S K
Sbjct: 172 FKLKSNMKVHCGFI-QGGGAEMDPIDIKYVKKCKFVVASGIFDGYDIPHQPSNISLRSKK 230

Query: 249 KVTMLYKV 256
               L  V
Sbjct: 231 LFCFLMVV 238


>Medtr8g085850.1 | plant/F20M13-60 protein | HC |
           chr8:35596574-35600550 | 20130731
          Length = 493

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 12/128 (9%)

Query: 129 DQLDIPVEEESRLPVGKVLYMSESDLSIPGGNATLSQLRAEDTRFNLFTGNQTFEQRDRS 188
           D++ IP    S   V  + Y +E +  IP  ++  S L         F G+ +++QR+ S
Sbjct: 114 DKIVIPTRRTSDKIVKNLSYFTEDE--IPNDSSQSSPL---------FGGHLSWKQREES 162

Query: 189 FEVKETMMVHCGFYSENGGFKISDEDRSYMQECKVAVSTCAFGGGDDLYQPIGMSEASLK 248
           F++K  M VHCGF  + GG ++   D  Y+++CK  V++  F G D  +QP  +S  S K
Sbjct: 163 FKLKSNMKVHCGFI-QGGGAEMDPIDIKYVKKCKFVVASGIFDGYDIPHQPSNISLRSKK 221

Query: 249 KVTMLYKV 256
               L  V
Sbjct: 222 LFCFLMVV 229


>Medtr1g096320.1 | transmembrane protein | HC |
           chr1:43376935-43368935 | 20130731
          Length = 709

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 6/87 (6%)

Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFY-----SENGGFKISDEDRSYMQECKVAVSTCAF 230
           F G+Q+ E+R+ SF  ++   + CGF      S + GF +S++D SY+  C +AV +C F
Sbjct: 395 FAGHQSLEERENSFLARD-QNIKCGFVKGPEGSPSTGFDMSEDDESYISRCHIAVISCIF 453

Query: 231 GGGDDLYQPIGMSEASLKKVTMLYKVY 257
           G  D L  P   + + L +  + + ++
Sbjct: 454 GNSDRLRTPATKTISRLSRKNVCFVMF 480


>Medtr1g096320.2 | transmembrane protein | HC |
           chr1:43376935-43368935 | 20130731
          Length = 703

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 6/87 (6%)

Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFY-----SENGGFKISDEDRSYMQECKVAVSTCAF 230
           F G+Q+ E+R+ SF  ++   + CGF      S + GF +S++D SY+  C +AV +C F
Sbjct: 389 FAGHQSLEERENSFLARD-QNIKCGFVKGPEGSPSTGFDMSEDDESYISRCHIAVISCIF 447

Query: 231 GGGDDLYQPIGMSEASLKKVTMLYKVY 257
           G  D L  P   + + L +  + + ++
Sbjct: 448 GNSDRLRTPATKTISRLSRKNVCFVMF 474


>Medtr2g085170.1 | DUF616 family protein | HC |
           chr2:33286444-33292940 | 20130731
          Length = 592

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFY-----SENGGFKISDEDRSYM-QECKVAVSTCA 229
           F G    E+RD SF++KETM VHCGF          GF   +ED   + Q   + V++  
Sbjct: 227 FGGYPPLEERDASFDIKETMKVHCGFVKGSRPGRQTGFDFDEEDLLELDQYHDIIVASAI 286

Query: 230 FGGGDDLYQPIGMSEASLKKV 250
           FG  D + QP  +S+ + K +
Sbjct: 287 FGNYDVIQQPRNISKQARKNI 307


>Medtr2g085170.2 | DUF616 family protein | HC |
           chr2:33286455-33292940 | 20130731
          Length = 592

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 176 FTGNQTFEQRDRSFEVKETMMVHCGFY-----SENGGFKISDEDRSYM-QECKVAVSTCA 229
           F G    E+RD SF++KETM VHCGF          GF   +ED   + Q   + V++  
Sbjct: 227 FGGYPPLEERDASFDIKETMKVHCGFVKGSRPGRQTGFDFDEEDLLELDQYHDIIVASAI 286

Query: 230 FGGGDDLYQPIGMSEASLKKV 250
           FG  D + QP  +S+ + K +
Sbjct: 287 FGNYDVIQQPRNISKQARKNI 307