Miyakogusa Predicted Gene

Lj5g3v0294890.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0294890.1 Non Characterized Hit- tr|E0VVF7|E0VVF7_PEDHC
Putative uncharacterized protein OS=Pediculus humanus
,46.49,6e-18,seg,NULL; Repeated motif present between
transmembrane,Cystinosin/ERS1p repeat; PQ-loop,NULL;
SUBFAM,CUFF.52755.1
         (148 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g018800.1 | mannose-P-dolichol utilization defect 1-like p...   238   2e-63
Medtr1g018800.2 | mannose-P-dolichol utilization defect 1-like p...   122   9e-29

>Medtr1g018800.1 | mannose-P-dolichol utilization defect 1-like
           protein | HC | chr1:5523703-5515974 | 20130731
          Length = 235

 Score =  238 bits (606), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 115/147 (78%), Positives = 124/147 (84%)

Query: 1   MEYLGIDVTCAVNSLRHGNFPDKDCLLPLISKLLGYAIVAASTTVKLPQILKILKHQSVR 60
           MEYLGID++CA+ SLR+GN P+KDCLLPLISKLLGYAIVAASTTVKLPQILKILKHQSVR
Sbjct: 1   MEYLGIDLSCAIGSLRNGNIPEKDCLLPLISKLLGYAIVAASTTVKLPQILKILKHQSVR 60

Query: 61  GLSMLSFELEVVGYTIALAYCLHKGLPFSAYGEXXXXXXXXXXXXXXXYYYSRPVRTATW 120
           GLSMLSFELEVVGYTIALAYCLHKGLPFSAYGE               YYYS+P+ T TW
Sbjct: 61  GLSMLSFELEVVGYTIALAYCLHKGLPFSAYGELLFLLIQALVLVAIIYYYSQPISTVTW 120

Query: 121 IRALLYSAAAPTILAGQIDPFLFEALY 147
           IR L+Y A APTILAG+IDP LFEALY
Sbjct: 121 IRPLIYCAVAPTILAGKIDPVLFEALY 147


>Medtr1g018800.2 | mannose-P-dolichol utilization defect 1-like
           protein | HC | chr1:5522938-5515974 | 20130731
          Length = 172

 Score =  122 bits (307), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 59/84 (70%), Positives = 63/84 (75%)

Query: 64  MLSFELEVVGYTIALAYCLHKGLPFSAYGEXXXXXXXXXXXXXXXYYYSRPVRTATWIRA 123
           MLSFELEVVGYTIALAYCLHKGLPFSAYGE               YYYS+P+ T TWIR 
Sbjct: 1   MLSFELEVVGYTIALAYCLHKGLPFSAYGELLFLLIQALVLVAIIYYYSQPISTVTWIRP 60

Query: 124 LLYSAAAPTILAGQIDPFLFEALY 147
           L+Y A APTILAG+IDP LFEALY
Sbjct: 61  LIYCAVAPTILAGKIDPVLFEALY 84