Miyakogusa Predicted Gene

Lj5g3v0290680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0290680.1 Non Characterized Hit- tr|D8S0G6|D8S0G6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.32,2e-18,zinc finger,Zinc finger, C2H2-like;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; ZINC_FINGER_C2H2_2,Zinc
fi,CUFF.52831.1
         (380 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g015930.1 | C2H2 type zinc finger protein | HC | chr1:4124...   481   e-136
Medtr1g019050.1 | NYN domain protein | HC | chr1:5659533-5662682...   230   2e-60
Medtr3g084750.3 | C2H2 type zinc finger protein | HC | chr3:3827...   209   4e-54
Medtr3g084750.2 | C2H2 type zinc finger protein | HC | chr3:3827...   209   4e-54
Medtr3g084750.1 | C2H2 type zinc finger protein | HC | chr3:3827...   208   7e-54

>Medtr1g015930.1 | C2H2 type zinc finger protein | HC |
           chr1:4124578-4122613 | 20130731
          Length = 360

 Score =  481 bits (1237), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 237/332 (71%), Positives = 268/332 (80%), Gaps = 12/332 (3%)

Query: 28  TTVSVSVLFPHRHNRFRCCSSI-----EIDMVRDNKTGSYAAKQNKVVVLWDLDNKPPRG 82
           T  S   L P    R +CCS+      +IDMV+  K G+Y  KQNKV VLWDLDNKPPRG
Sbjct: 10  TPHSFLSLKPKPQPRIQCCSTNNNIIDDIDMVK-TKQGTYEQKQNKVCVLWDLDNKPPRG 68

Query: 83  PPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHERRQRKTTDILEKKGIVTPS 142
           PPY+AAVSLK LAE FGDV DISAYANRHAFIHLPQWVL++RR+RK  DILE+KGI+ P 
Sbjct: 69  PPYNAAVSLKNLAERFGDVTDISAYANRHAFIHLPQWVLNQRRERKNLDILERKGIINPP 128

Query: 143 DPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLKGKKRQRFKERFIRGNHKYN 202
           +PYVC+VCGRKCKTN+DLKKHFKQLHQRERQKKLNR+NSLKGKKRQ++KERF+ G+ KYN
Sbjct: 129 EPYVCSVCGRKCKTNVDLKKHFKQLHQRERQKKLNRLNSLKGKKRQKYKERFVSGDDKYN 188

Query: 203 EAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWLFLVSD 262
           +A R ++ PKVGYGLASELRRAGVFVKTVEDKPQAADWALK+QM HSMSRGIDWLFLVSD
Sbjct: 189 DAVREILKPKVGYGLASELRRAGVFVKTVEDKPQAADWALKKQMMHSMSRGIDWLFLVSD 248

Query: 263 DSDFSEMLKRAREANLGTVVVGDADRALGQHADFWVPWIAVEKGEVSEMDL-----KNXX 317
           DSDFSEML++AREANLGTVVVGD DRALG+HAD WVPW AVE GEV +MDL         
Sbjct: 249 DSDFSEMLRKAREANLGTVVVGDVDRALGRHADLWVPWNAVENGEVMDMDLIPRNRDRRR 308

Query: 318 XXXXXXXXXDSPDGLFFNEGDEELDDDFVLVY 349
                    D  D LFF+EG EE++DDF+L Y
Sbjct: 309 TNSTSTTMDDFGDVLFFHEG-EEMEDDFMLEY 339


>Medtr1g019050.1 | NYN domain protein | HC | chr1:5659533-5662682 |
           20130731
          Length = 319

 Score =  230 bits (586), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/290 (45%), Positives = 177/290 (61%), Gaps = 29/290 (10%)

Query: 28  TTVSVSVLFPHRHNRFRCCSSIEIDMVRDNKTGSYAAKQNK-VVVLWDLDNKPPRGPPYH 86
           TT++ S+LF + +N F   +  +  +   N         NK V++LWDLDNKPP GPPY+
Sbjct: 18  TTLTSSLLFLNTNNNFSSKARFQCSIKATNPNTKQVTNSNKKVIILWDLDNKPPHGPPYN 77

Query: 87  AAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHERRQRKTTDILEKKGIVTPSDPYV 146
           AA+SLKT AE FGDVV ISAY  RH+F +                 L         + ++
Sbjct: 78  AALSLKTFAERFGDVVSISAYTKRHSFFN-----------------LPLWNPNPNPNSFL 120

Query: 147 CTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLKGKKRQRFKERFIRGNHKYNEAAR 206
           C VCG +C++  D+  HFK++H+ +++K LNR+ S+K K   R K  FIR  H+YNEA  
Sbjct: 121 CRVCGYECRSLTDVNIHFKRVHEYQKRKTLNRLKSIKLK---RSKVNFIRKVHRYNEAKS 177

Query: 207 TLVTPKVGYGLASELRRAGVFVK--TVEDKPQAADWALKRQMQHSMSRGID--WLFLVSD 262
                KVG+G+ASELRR GVFVK  TV  K +AAD +LKR+M   MS G+D   L LVSD
Sbjct: 178 NNAPLKVGFGMASELRRGGVFVKIVTVRGKVKAADSSLKREM---MSGGVDSLVLVLVSD 234

Query: 263 DSDFSEMLKRAREANLGTVVVGDA-DRALGQHADFWVPWIAVEKGEVSEM 311
           DS FS+ML++ RE  + TVVVGD   R LG++AD W+PWI VE G V  +
Sbjct: 235 DSVFSKMLRKVREVKVETVVVGDYWGRDLGRNADLWLPWILVENGNVEYL 284


>Medtr3g084750.3 | C2H2 type zinc finger protein | HC |
           chr3:38276583-38272141 | 20130731
          Length = 411

 Score =  209 bits (532), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 114/247 (46%), Positives = 157/247 (63%), Gaps = 4/247 (1%)

Query: 65  KQNKVVVLWDLDNKPPRG-PPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHE 123
           K  +V + WDLDNKPP   PPY  A  L+  A SFG V  + AYAN H F ++P  V   
Sbjct: 92  KLCRVGLFWDLDNKPPNSIPPYEVANKLRIAAASFGVVRHMVAYANSHTFSNVPHIVRER 151

Query: 124 RRQRKTTDILEKKGIVTPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLK 183
           R++R+    LE KG++  ++P+VC VCGRK  TN  L  HFKQLH+RE  K+LNR+ S +
Sbjct: 152 RKERELLYRLEDKGVIKRNEPHVCRVCGRKFYTNEKLVNHFKQLHEREHAKRLNRIESAR 211

Query: 184 GKKRQRFKERFIRGNHKYNEAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQAADWALK 243
           G ++ +   ++     KY +AA  ++TPKVGYGLA EL+RAG +V+TV D+PQAAD AL+
Sbjct: 212 GSRKVKLVGQYAMKMEKYKKAASAVLTPKVGYGLADELKRAGFWVQTVLDRPQAADIALQ 271

Query: 244 RQMQHSMS-RGIDWLFLVSDDSDFSEMLKRAREANLGTVVVGD--ADRALGQHADFWVPW 300
           + M   M  R ++ L LVSDDSDF +++K A+   L TVV+GD  +D  L + AD    W
Sbjct: 272 KHMVDMMDHRRVECLVLVSDDSDFVDVIKEAKLRCLKTVVIGDFSSDGVLKRTADTAFSW 331

Query: 301 IAVEKGE 307
             +  G+
Sbjct: 332 EEILMGK 338


>Medtr3g084750.2 | C2H2 type zinc finger protein | HC |
           chr3:38276658-38272494 | 20130731
          Length = 411

 Score =  209 bits (532), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 114/247 (46%), Positives = 157/247 (63%), Gaps = 4/247 (1%)

Query: 65  KQNKVVVLWDLDNKPPRG-PPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHE 123
           K  +V + WDLDNKPP   PPY  A  L+  A SFG V  + AYAN H F ++P  V   
Sbjct: 92  KLCRVGLFWDLDNKPPNSIPPYEVANKLRIAAASFGVVRHMVAYANSHTFSNVPHIVRER 151

Query: 124 RRQRKTTDILEKKGIVTPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLK 183
           R++R+    LE KG++  ++P+VC VCGRK  TN  L  HFKQLH+RE  K+LNR+ S +
Sbjct: 152 RKERELLYRLEDKGVIKRNEPHVCRVCGRKFYTNEKLVNHFKQLHEREHAKRLNRIESAR 211

Query: 184 GKKRQRFKERFIRGNHKYNEAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQAADWALK 243
           G ++ +   ++     KY +AA  ++TPKVGYGLA EL+RAG +V+TV D+PQAAD AL+
Sbjct: 212 GSRKVKLVGQYAMKMEKYKKAASAVLTPKVGYGLADELKRAGFWVQTVLDRPQAADIALQ 271

Query: 244 RQMQHSMS-RGIDWLFLVSDDSDFSEMLKRAREANLGTVVVGD--ADRALGQHADFWVPW 300
           + M   M  R ++ L LVSDDSDF +++K A+   L TVV+GD  +D  L + AD    W
Sbjct: 272 KHMVDMMDHRRVECLVLVSDDSDFVDVIKEAKLRCLKTVVIGDFSSDGVLKRTADTAFSW 331

Query: 301 IAVEKGE 307
             +  G+
Sbjct: 332 EEILMGK 338


>Medtr3g084750.1 | C2H2 type zinc finger protein | HC |
           chr3:38274286-38273207 | 20130731
          Length = 359

 Score =  208 bits (530), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 114/247 (46%), Positives = 157/247 (63%), Gaps = 4/247 (1%)

Query: 65  KQNKVVVLWDLDNKPPRG-PPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHE 123
           K  +V + WDLDNKPP   PPY  A  L+  A SFG V  + AYAN H F ++P  V   
Sbjct: 40  KLCRVGLFWDLDNKPPNSIPPYEVANKLRIAAASFGVVRHMVAYANSHTFSNVPHIVRER 99

Query: 124 RRQRKTTDILEKKGIVTPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLK 183
           R++R+    LE KG++  ++P+VC VCGRK  TN  L  HFKQLH+RE  K+LNR+ S +
Sbjct: 100 RKERELLYRLEDKGVIKRNEPHVCRVCGRKFYTNEKLVNHFKQLHEREHAKRLNRIESAR 159

Query: 184 GKKRQRFKERFIRGNHKYNEAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQAADWALK 243
           G ++ +   ++     KY +AA  ++TPKVGYGLA EL+RAG +V+TV D+PQAAD AL+
Sbjct: 160 GSRKVKLVGQYAMKMEKYKKAASAVLTPKVGYGLADELKRAGFWVQTVLDRPQAADIALQ 219

Query: 244 RQMQHSMS-RGIDWLFLVSDDSDFSEMLKRAREANLGTVVVGD--ADRALGQHADFWVPW 300
           + M   M  R ++ L LVSDDSDF +++K A+   L TVV+GD  +D  L + AD    W
Sbjct: 220 KHMVDMMDHRRVECLVLVSDDSDFVDVIKEAKLRCLKTVVIGDFSSDGVLKRTADTAFSW 279

Query: 301 IAVEKGE 307
             +  G+
Sbjct: 280 EEILMGK 286