Miyakogusa Predicted Gene
- Lj5g3v0290430.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0290430.1 Non Characterized Hit- tr|A5B8Y6|A5B8Y6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,64.62,0.000000000000002,(Trans)glycosidases,Glycoside hydrolase,
superfamily; Glycosyl hydrolase domain,NULL; Alpha-amylase
,CUFF.52731.1
(207 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g019480.1 | alpha amylase domain protein | HC | chr1:58847... 354 3e-98
Medtr1g019440.1 | alpha amylase domain protein | HC | chr1:58706... 295 2e-80
Medtr1g026170.1 | alpha amylase domain protein | HC | chr1:84558... 191 4e-49
Medtr7g013300.1 | alpha amylase domain protein | HC | chr7:38376... 185 2e-47
Medtr7g013300.2 | alpha amylase domain protein | HC | chr7:38376... 185 2e-47
Medtr8g468990.3 | alpha amylase domain protein | HC | chr8:25017... 173 9e-44
Medtr8g468990.1 | alpha amylase domain protein | HC | chr8:25017... 173 1e-43
Medtr8g468990.2 | alpha amylase domain protein | HC | chr8:25017... 104 5e-23
Medtr1g019460.1 | alpha-amylase, putative | HC | chr1:5876457-58... 50 1e-06
>Medtr1g019480.1 | alpha amylase domain protein | HC |
chr1:5884776-5886764 | 20130731
Length = 402
Score = 354 bits (909), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 171/199 (85%), Positives = 177/199 (88%)
Query: 9 FTKIYMEKTSPDFAVGELYQNVTRGQDGRPLANQDKHRSTLVKWVDDAGGAVTAFDFTTK 68
FTK Y+EKTSPDF VGELY+NV G DG+PLANQDKHR TLVKWV+DAGG VT FDFTTK
Sbjct: 190 FTKNYVEKTSPDFTVGELYRNVELGSDGKPLANQDKHRETLVKWVNDAGGVVTTFDFTTK 249
Query: 69 MVLGAAVQGELWRMKDANGKPPGMIGTKPSNAVTFVDNHDTWSQRTWPFPDDKVMLGYVY 128
M+LGAAVQGELWRMKDANGKPPGMIG PSNAVTFVDNHDT SQ+ WPFPDDKVMLGYVY
Sbjct: 250 MILGAAVQGELWRMKDANGKPPGMIGIMPSNAVTFVDNHDTGSQKLWPFPDDKVMLGYVY 309
Query: 129 ILTHPGHPTIFYDHYIEWGLMEPIKKLTEIRKRNGIKPTSTVNILAAEADLYMAEIDNKI 188
ILTHPGHPTIFYDHYIEWGLMEPIKKLT IRKRNGI TS VNILAAE DLYMA I NKI
Sbjct: 310 ILTHPGHPTIFYDHYIEWGLMEPIKKLTAIRKRNGITATSNVNILAAENDLYMANIGNKI 369
Query: 189 ITKIGPKQDLGNLLPPNVQ 207
I KIGPK DLGNLLPPN Q
Sbjct: 370 IVKIGPKLDLGNLLPPNAQ 388
>Medtr1g019440.1 | alpha amylase domain protein | HC |
chr1:5870673-5873171 | 20130731
Length = 421
Score = 295 bits (754), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 140/208 (67%), Positives = 163/208 (78%), Gaps = 1/208 (0%)
Query: 1 MVVGYAPRFTKIYMEKTSPDFAVGELYQNVTRGQDGRPLANQDKHRSTLVKWVDDAGGAV 60
V GYAP TKIYME TSPDFAVGE + +++ GQDG+ NQD R LV WV++ GG V
Sbjct: 202 FVKGYAPSITKIYMENTSPDFAVGEYWNSLSYGQDGKLNYNQDAARGELVNWVENGGGVV 261
Query: 61 TAFDFTTKMVLGAAVQGELWRMKDANGKPPGMIGTKPSNAVTFVDNHDTWS-QRTWPFPD 119
AFDFTTK +L AAVQGELWR+KD+NGKPPG+IG KP N TF+DNHDT S Q+ WPFP
Sbjct: 262 NAFDFTTKGILQAAVQGELWRLKDSNGKPPGLIGIKPENGATFIDNHDTGSTQKLWPFPS 321
Query: 120 DKVMLGYVYILTHPGHPTIFYDHYIEWGLMEPIKKLTEIRKRNGIKPTSTVNILAAEADL 179
DKVM GY YILTHPG P+IFYDH+ +WGL + I KLT IR+RNGI STVNILAA+ADL
Sbjct: 322 DKVMQGYAYILTHPGTPSIFYDHFFDWGLKDQIAKLTAIRQRNGINMKSTVNILAADADL 381
Query: 180 YMAEIDNKIITKIGPKQDLGNLLPPNVQ 207
Y+A+IDNKII KIGP+ DLGNL+P N
Sbjct: 382 YVAKIDNKIIVKIGPRMDLGNLIPSNFH 409
>Medtr1g026170.1 | alpha amylase domain protein | HC |
chr1:8455846-8461251 | 20130731
Length = 432
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 124/194 (63%), Gaps = 6/194 (3%)
Query: 4 GYAPRFTKIYMEKTSPDFAVGELYQNVTRGQDGRPL-ANQDKHRSTLVKWVDDAGGAVTA 62
GY+P++ K Y+E P +VGE + T +G L NQD HR ++ W+D G TA
Sbjct: 216 GYSPKYVKEYIEGPKPMLSVGEYWD--TCNYNGSTLDYNQDNHRQRIINWIDGTGQLSTA 273
Query: 63 FDFTTKMVLGAAVQGELWRMKDANGKPPGMIGTKPSNAVTFVDNHDTWS-QRTWPFPDDK 121
FDFTTK +L AV+ E WR++DA GKPPG+IG PS +VTFVDNHDT S Q WPFP D
Sbjct: 274 FDFTTKGILQEAVKREFWRLRDAQGKPPGVIGWWPSRSVTFVDNHDTGSTQAHWPFPSDH 333
Query: 122 VMLGYVYILTHPGHPTIFYDHYIEW--GLMEPIKKLTEIRKRNGIKPTSTVNILAAEADL 179
VM GY YILTHPG PTIFYDH+ +W E I KL + RKR I S + IL A+ ++
Sbjct: 334 VMEGYAYILTHPGTPTIFYDHFYDWNNSFHEQIVKLIDTRKRQDIHSRSPIRILEAKHNV 393
Query: 180 YMAEIDNKIITKIG 193
Y A I K+ KIG
Sbjct: 394 YSAIIGEKVCMKIG 407
>Medtr7g013300.1 | alpha amylase domain protein | HC |
chr7:3837657-3823104 | 20130731
Length = 962
Score = 185 bits (470), Expect = 2e-47, Method: Composition-based stats.
Identities = 87/193 (45%), Positives = 128/193 (66%), Gaps = 2/193 (1%)
Query: 2 VVGYAPRFTKIYMEKTSPDFAVGELYQNVTRGQDGRPLANQDKHRSTLVKWVDDAGGAVT 61
V G++ + K Y+E ++P FA+GE + +++ + G NQD HR +V W++ GG +
Sbjct: 739 VKGFSGTYVKEYIEASNPVFAIGEYWDSLSY-EHGSLCYNQDAHRQRIVNWINATGGTSS 797
Query: 62 AFDFTTKMVLGAAVQGELWRMKDANGKPPGMIGTKPSNAVTFVDNHDTWS-QRTWPFPDD 120
AFD TTK +L +A+ E WRM D GKP G++G PS AVTF++NHDT S Q WPFP D
Sbjct: 798 AFDITTKGILHSALHNEYWRMIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRD 857
Query: 121 KVMLGYVYILTHPGHPTIFYDHYIEWGLMEPIKKLTEIRKRNGIKPTSTVNILAAEADLY 180
K+M GY YILTHPG P IFYDH+ ++G+ + I +L E R+R GI S++ I A + Y
Sbjct: 858 KLMQGYAYILTHPGTPVIFYDHFYDFGIHDVITELIEARRRAGIHCRSSIKIYNANNEGY 917
Query: 181 MAEIDNKIITKIG 193
+A++ + ++ K+G
Sbjct: 918 VAQVGDSLVMKLG 930
>Medtr7g013300.2 | alpha amylase domain protein | HC |
chr7:3837686-3823076 | 20130731
Length = 962
Score = 185 bits (470), Expect = 2e-47, Method: Composition-based stats.
Identities = 87/193 (45%), Positives = 128/193 (66%), Gaps = 2/193 (1%)
Query: 2 VVGYAPRFTKIYMEKTSPDFAVGELYQNVTRGQDGRPLANQDKHRSTLVKWVDDAGGAVT 61
V G++ + K Y+E ++P FA+GE + +++ + G NQD HR +V W++ GG +
Sbjct: 739 VKGFSGTYVKEYIEASNPVFAIGEYWDSLSY-EHGSLCYNQDAHRQRIVNWINATGGTSS 797
Query: 62 AFDFTTKMVLGAAVQGELWRMKDANGKPPGMIGTKPSNAVTFVDNHDTWS-QRTWPFPDD 120
AFD TTK +L +A+ E WRM D GKP G++G PS AVTF++NHDT S Q WPFP D
Sbjct: 798 AFDITTKGILHSALHNEYWRMIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRD 857
Query: 121 KVMLGYVYILTHPGHPTIFYDHYIEWGLMEPIKKLTEIRKRNGIKPTSTVNILAAEADLY 180
K+M GY YILTHPG P IFYDH+ ++G+ + I +L E R+R GI S++ I A + Y
Sbjct: 858 KLMQGYAYILTHPGTPVIFYDHFYDFGIHDVITELIEARRRAGIHCRSSIKIYNANNEGY 917
Query: 181 MAEIDNKIITKIG 193
+A++ + ++ K+G
Sbjct: 918 VAQVGDSLVMKLG 930
>Medtr8g468990.3 | alpha amylase domain protein | HC |
chr8:25017230-25009440 | 20130731
Length = 764
Score = 173 bits (439), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 125/207 (60%), Gaps = 8/207 (3%)
Query: 1 MVVGYAPRFTKIYMEKTSPDFAVGELYQNVTRGQDGRPLANQDKHRSTLVKWVDDAGGAV 60
V G+ + K YM+ T P F+VGE + +++ G NQD HR +V W+ AGG
Sbjct: 542 FVRGFWGGYVKDYMDATKPYFSVGEYWDSLSYTY-GEMDHNQDAHRQRIVDWISAAGGTA 600
Query: 61 TAFDFTTKMVLGAAVQ-GELWRMKDANGKPPGMIGTKPSNAVTFVDNHDTWS-QRTWPFP 118
AFD TTK +L +A++ E WR+ D GKPPG++G PS AVTF++NHDT S Q W FP
Sbjct: 601 GAFDVTTKGILHSALERCEYWRLSDQQGKPPGVMGWWPSRAVTFIENHDTGSTQGHWRFP 660
Query: 119 DDKVMLGYVYILTHPGHPTIFYDHYIEWGLMEPIKKLTEIRKRNGIKPTSTVNILAAEAD 178
+K M GY Y LTHPG P++F+DH E I L IRKRNGI STV I +E D
Sbjct: 661 HEKEMQGYAYTLTHPGTPSVFFDHIFSHYKTE-IGALLSIRKRNGINCRSTVKITKSERD 719
Query: 179 LYMAEIDNKIITKIGPKQDLGNLLPPN 205
+Y A ID K+ KIGP G+ PP+
Sbjct: 720 VYAAIIDEKVAMKIGP----GHYEPPS 742
>Medtr8g468990.1 | alpha amylase domain protein | HC |
chr8:25017934-25009440 | 20130731
Length = 913
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 125/207 (60%), Gaps = 8/207 (3%)
Query: 1 MVVGYAPRFTKIYMEKTSPDFAVGELYQNVTRGQDGRPLANQDKHRSTLVKWVDDAGGAV 60
V G+ + K YM+ T P F+VGE + +++ G NQD HR +V W+ AGG
Sbjct: 691 FVRGFWGGYVKDYMDATKPYFSVGEYWDSLSYTY-GEMDHNQDAHRQRIVDWISAAGGTA 749
Query: 61 TAFDFTTKMVLGAAVQ-GELWRMKDANGKPPGMIGTKPSNAVTFVDNHDTWS-QRTWPFP 118
AFD TTK +L +A++ E WR+ D GKPPG++G PS AVTF++NHDT S Q W FP
Sbjct: 750 GAFDVTTKGILHSALERCEYWRLSDQQGKPPGVMGWWPSRAVTFIENHDTGSTQGHWRFP 809
Query: 119 DDKVMLGYVYILTHPGHPTIFYDHYIEWGLMEPIKKLTEIRKRNGIKPTSTVNILAAEAD 178
+K M GY Y LTHPG P++F+DH E I L IRKRNGI STV I +E D
Sbjct: 810 HEKEMQGYAYTLTHPGTPSVFFDHIFSHYKTE-IGALLSIRKRNGINCRSTVKITKSERD 868
Query: 179 LYMAEIDNKIITKIGPKQDLGNLLPPN 205
+Y A ID K+ KIGP G+ PP+
Sbjct: 869 VYAAIIDEKVAMKIGP----GHYEPPS 891
>Medtr8g468990.2 | alpha amylase domain protein | HC |
chr8:25017934-25009440 | 20130731
Length = 823
Score = 104 bits (260), Expect = 5e-23, Method: Composition-based stats.
Identities = 56/126 (44%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query: 2 VVGYAPRFTKIYMEKTSPDFAVGELYQNVTRGQDGRPLANQDKHRSTLVKWVDDAGGAVT 61
V G+ + K YM+ T P F+VGE + +++ G NQD HR +V W+ AGG
Sbjct: 692 VRGFWGGYVKDYMDATKPYFSVGEYWDSLSYTY-GEMDHNQDAHRQRIVDWISAAGGTAG 750
Query: 62 AFDFTTKMVLGAAVQG-ELWRMKDANGKPPGMIGTKPSNAVTFVDNHDTWSQRTW--PFP 118
AFD TTK +L +A++ E WR+ D GKPPG++G PS AVTF++NHDT S + W PF
Sbjct: 751 AFDVTTKGILHSALERCEYWRLSDQQGKPPGVMGWWPSRAVTFIENHDTGSTQVWSSPFK 810
Query: 119 DDKVML 124
+ V+L
Sbjct: 811 NRLVIL 816
>Medtr1g019460.1 | alpha-amylase, putative | HC |
chr1:5876457-5876699 | 20130731
Length = 65
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 16/67 (23%)
Query: 139 FYDHYIEWGLMEPIKKLTEIRKRNGIKPTSTVNILAAEADLYMAEIDNKIITKIGPKQDL 198
FYDH+ +WGL E I LT IR+RNGI S VNI +AD + L
Sbjct: 3 FYDHFFDWGLKEQITNLTVIRQRNGINMQSIVNI---QADQRWTLV-------------L 46
Query: 199 GNLLPPN 205
GNL+P N
Sbjct: 47 GNLIPTN 53